Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01480 | ATGTCGGACGAGGAGCACCACTTTGAGTCGAAGGCCGACGCTGGAGCTTCCAAAACCTATCCGCAGCAGGCCGGTACCATTCGCAAGAACGGTTACATAGTCATCAAGGGCAGACCTTGCAAGGTTGTGGAGGTCTCCACTTCTAAAACCGGTAAGCATGGTCATGCTAAATGTCACTTTGTTGCAATTGACATCTTCACTGCCAAAAAGTTGGAAGATATTGTTCCTTCTTCACACAATTGTGATGTACCCCATGTTACCAGAACTGACTATCAGTTGATTGATATCTCTGAGGATGGATTTGTTAGTCTGCTGACGGACAATGGTAGCACCAAGGATGACCTGAGGCTTCCAACCGATGACAACCTTCTGACTCAGATTAAAGATGGATTTTCTGAGGGTAAGGATCTGGTCGTCTCTGTTATGTCTGCAATGGGGGAAGAGCAGATTTGTGCACTCAAAGACATTGGCCCCAAGTAG | 480 | 46.88 | MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTDDNLLTQIKDGFSEGKDLVVSVMSAMGEEQICALKDIGPK | 159 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 27504947 | 27511649 | - | Bda028319.1 | Bda07g01480 | 10370 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01480 | 159 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 1 | 156 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bda07g01480 | 159 | CDD | S1_eIF5A | 86 | 156 | - | - | |
Bda07g01480 | 159 | Gene3D | - | 1 | 85 | IPR014722 | - | |
Bda07g01480 | 159 | SMART | eIF_5a_2 | 85 | 154 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bda07g01480 | 159 | TIGRFAM | eIF_5A: translation elongation factor IF5A | 17 | 153 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bda07g01480 | 159 | Gene3D | - | 86 | 158 | IPR012340 | - | |
Bda07g01480 | 159 | PIRSF | Transl_init_eIF5A | 1 | 157 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bda07g01480 | 159 | PANTHER | BNAA07G09420D PROTEIN | 1 | 156 | - | - | |
Bda07g01480 | 159 | SUPERFAMILY | Nucleic acid-binding proteins | 86 | 156 | IPR012340 | - | |
Bda07g01480 | 159 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bda07g01480 | 159 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 50 | 57 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bda07g01480 | 159 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 85 | 154 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bda07g01480 | 159 | SUPERFAMILY | Translation proteins SH3-like domain | 15 | 93 | IPR008991 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00098 | Bda-Chr3:920357 | Bda07g01480 | Bda-Chr7:27504947 | 1.14E-107 | dispersed | |
Bda03g00179 | Bda-Chr3:1435718 | Bda07g01480 | Bda-Chr7:27504947 | 7.19E-108 | dispersed | |
Bda07g01480 | Bda-Chr7:27504947 | Bda11g01711 | Bda-Chr11:51515960 | 2.81E-105 | dispersed | |
Bda10g01073 | Bda-Chr10:44726450 | Bda07g01480 | Bda-Chr7:27504947 | 1.09E-116 | wgd | |
Bda14g00862 | Bda-Chr14:6643844 | Bda07g01480 | Bda-Chr7:27504947 | 6.42E-106 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01480 | K03263 | K02180 | oeu:111388373 | 317.775 |