Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01492 ATGGCCGTCCACCTCCTTTTCTCGATAGGAAAACGAACATTCTCAATCCAAACTTCCATTTCTCCACTCTGTTCTATCTTCCTCCGCAACATTTCCTCCTCTCCCTTCTCCTCCCTCTGCAGACCCCATTTCTCTCCTCCTCATACTCCACCGGTCCCGAAGAAAGTGCCCTTCATAGTTTCGTCTCATGGAAGGACGCGTCTGGATCCCTTCCGTTGGATGTCCGATACGAATGACTCTGATCTCGCCGAGTATCTTGCCCGAGAAAACTCATACGCTGATGCTTTTATGGTGGACACTAAGAATCTGCAACACGCTATGTTTTCGGAGATGGCCAGTCGAATCCCGGCTCAAATTTCCACTCCTCCTGAGCGTTGGGGACCTTGGTTGTACTACCAATACATTCCAGAGGGAAAGGAATACCCAGTTCTATGTAGAATGTTAGAAACAAAGGATAGCGGTTGGCTAAAGAGTCTTCTCCAGTTGGCAAAAGGAAATTCTGGAAGGGAGCAAATTTTGCTTGACTGGAATGAAATTGCTAAACAGTTATGTTCATGTTGGTACATGTCGAGTTTCACCAGATTACCACTTTTTAGCATATACGGTTGA 609 46.31 MAVHLLFSIGKRTFSIQTSISPLCSIFLRNISSSPFSSLCRPHFSPPHTPPVPKKVPFIVSSHGRTRLDPFRWMSDTNDSDLAEYLARENSYADAFMVDTKNLQHAMFSEMASRIPAQISTPPERWGPWLYYQYIPEGKEYPVLCRMLETKDSGWLKSLLQLAKGNSGREQILLDWNEIAKQLCSCWYMSSFTRLPLFSIYG 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27694569 27696715 - Bda028332.1 Bda07g01492 10382

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01492 202 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 50 182 IPR023302 GO:0004252
Bda07g01492 202 SUPERFAMILY Peptidase/esterase 'gauge' domain 46 181 - -
Bda07g01492 202 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 38 183 - -
Bda07g01492 202 Gene3D - 120 194 - -
Bda07g01492 202 PANTHER PROLYL OLIGOPEPTIDASE FAMILY PROTEIN 38 183 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01492 - - - jre:109022049 223.016
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01492 Bda-Chr7:27694569 Bda14g01222 Bda-Chr14:12322918 3.67E-21 dispersed
Bda07g01486 Bda-Chr7:27610352 Bda07g01492 Bda-Chr7:27694569 1.11E-101 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g992 . . . . . . Bma14g01669 . Cmo04g01649 . . . Car04g01626 . . . Cpe01g01398 Bhi07g01448 . . . . . . . . . . . . . . . . . . Csa05g02531 Chy10g01075 Cme10g01398 . Blo11g00797 Bda07g01492 . Bpe11g01659 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0032296 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1