Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01514 ATGGCGTTTCATGCTTCGACTCGTTTCGCGCCTCCGCTGCATCGCTCCACCCCTTCTTTCTTCCCCCACACCTCACCCATACTCTTTTTTACTGGCGATGTACGGATCCCCAGGCTCACCTATGTTTGTTCCCAACTGCCGGATTCCGACGGGCTTGTCTCCAAACGATCTGTCTCTTTGGAAGACTTTGATTCCCCGATCGGGTCTGCCGGTCCTCCGTCTTCGTCGTCCGCTATTGATTTTCTCACCCTGTGCCGTCGTCTTAAGACCACTAAAAGAAAAGGGTGGATCAATCATGGAATCAAAGGTCCTGAGTCAATTGCTGATCATATGTATCGCATGGCTTTGATGGGATTGATTGCTGAGGACATTCCGGGTGTGAACAGAGAAAGGTGCATTAAGATTGCTATCGTACATGACATTGCGGAAGCTATTGTTGGAGATATAACACCATCTGATGGAGTGCCCAAAGAAGAAAAGAGCAGAAGAGAATCGGCAGCATTAAATGAAATGTGTGAGGTTCTTGGTGGAGGGATGAGAGCTGAAGAGATCAAGGAACTTTGGGCAGAGTATGAAAACAATGCTTCTGTTGAGGCTAATCTTGTGAAAGATTTTGATAAAGTTGAAATGATTCTGCAAGCATTGGAATATGAAATGGAGCATGGGAAGGTTCTCGATGAGTTCTACCTTTCAACAGCGGGAAAATTTCAGACTGCTATAGGAAAAAGTTGGGCTGCTGAGATCATTTCCAGAAGAAAAAGCTTGGAGAAACGGCGCAATTAA 783 45.98 MAFHASTRFAPPLHRSTPSFFPHTSPILFFTGDVRIPRLTYVCSQLPDSDGLVSKRSVSLEDFDSPIGSAGPPSSSSAIDFLTLCRRLKTTKRKGWINHGIKGPESIADHMYRMALMGLIAEDIPGVNRERCIKIAIVHDIAEAIVGDITPSDGVPKEEKSRRESAALNEMCEVLGGGMRAEEIKELWAEYENNASVEANLVKDFDKVEMILQALEYEMEHGKVLDEFYLSTAGKFQTAIGKSWAAEIISRRKSLEKRRN 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28146614 28150342 + Bda028364.1 Bda07g01514 10404

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01514 260 Pfam HD domain 85 238 IPR006674 -
Bda07g01514 260 Gene3D Hypothetical protein af1432 71 260 - -
Bda07g01514 260 ProSiteProfiles HD domain profile. 107 211 IPR006674 -
Bda07g01514 260 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 15 258 - -
Bda07g01514 260 PANTHER UNCHARACTERIZED 15 258 IPR039356 GO:0002953
Bda07g01514 260 SUPERFAMILY HD-domain/PDEase-like 78 253 - -
Bda07g01514 260 SMART hd_13 103 220 IPR003607 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01514 K07023 YGK1, HDDC2; 5'-deoxynucleotidase [EC:3.1.3.89] - jre:109003814 362.844
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01514 Bda-Chr7:28146614 Bda10g01112 Bda-Chr10:45127247 1.40E-116 dispersed
Bda07g01514 Bda-Chr7:28146614 Bda11g00728 Bda-Chr11:7318405 1.04E-91 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g214 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0488 Cone9ag0500 . . . . . Blo11g00818 Bda07g01514 . Bpe11g01677 . . . . . . . . . . Cpe13g00023 . Bhi12g01430 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001138 3 2 3 3 3 2 4 2 2 2 2 2 4 2 2 4 2 3 4 2 2 2 2 2 2 1 2 3 6 4 79