Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01515 ATGGCAACCACATCTCCACCCCCTATATCATCTCCTCCTCCTCCAGGCCACTCTGGTGGAGGTCCACCACCTTCTGATCCAGTAGTTCCTCCTCCAGCTGAGTCCACTCCTCCTCCCGCATTTCCACCTCCGCCTCCGCAAGAGCCATCACCTCCCCCTTCATTGGAAACCACGCCTCCTCCACCTGCATCAACACCTCCTAATTTGCCTGCAACAACGCCACCACCACCAAGTCCATCTGATTCTCCGCCAGCAGCAGCACCACCACCCCCACCTGGATCATCGGCATCCAGTCCACCTCCTCGGAGTTCTCCCTCACCACCATCTTTGAGCCCTCCACCTCGAAATGTAACAACACCACCACCACAACCTAATCCACCTGAGAATTCACCCCCACCCCCACCTTCTATTCTACCACCTGAGAAATCACCCTCTCCGCCAACACCTCTACGCTCGCCACCGCCACCACCACCACCCGTATCAGTCCCTCCTGAAAATTCACCTCCTCCACCATCAACATTACCTCCCATGAGAGCACCTCCACCTCCACAGAATGATCCTCCACCTGATATAACTTCTCCTCCTCCACCTCATGAACCATCACCCGCACCACCTTCCATTCCTTCTCCTGCTCCGCCATCAGGCAATCAAACCGAGAATGATTCCACTCCTAATGCTTCAGCAAGCTCAATCTCTACAGGAAATGGGAGTGTTGGTGCTGTCGGAGTTATAGCTATTGGCATAGCTGCTGGAATCCTAGTGCTCAGCCTCCTTGGACTGGTCCTCTGGTGTTTGAGGAAGAAAAGGCAGAAAGTTTCTGGACTTACCGGTTATGTGATGCCATCTTCGCGTGACTCCTCACCAAGATCAGAGTCTCCCCTTATGAAGGTCCATTCTCCAATGCCCCCTGTTGGAAGTGGCTCTGGCAGTAACTGTTTACATTCACCAGCTGATACCAATGGATTAGGTAACTCTAGGTCATTGTTTACATATGAAGAACTAGCCACTGCCACAAACGGATTTGCAGATGCAAACCTTTTGGGTGAAGGTGGTTTCGGATCTGTTTATAAAGGAAATCTATCAGATGGGAGAGAAGTAGCTGTGAAGGAACTGAAAATTGGCAGTAGTCAAGGAGAGCGAGAATTCAAAGCTGAAGTCGACATTATTAGGCGCATACACCATCGCCATTTAGTTACATTAGTCGGGTATTGCGTATCAGTGAGCCGAAGACTACTTGTCTATGACTATGTTCCTAATGATACCCTCCATTATCATCTTCATGGGAAAAACGGACCAATTCTTGACTGGGCAAGACGCATTAAAATAGCTGGCGGTGCAGCTCGTGGATTGGCTTATCTCCATGAAGACTGTCATCCTAGAATTATTCACAGAGATATCAAATCATCAAACATTCTTTTAAATGAAAACTTTGAAGCTCAGGTTTCGGATTTTGGACTTGCGAAATTAGCTCCTGATGCAAATACACATGTAACTACTCGTGTCATGGGAACTTTCGGATATGTAGCCCCCGAATATGCCTCAAGTGGAAAATTAACTGAGAAATCAGATGTCTTCTCGTTTGGAGTAGTGCTCCTGGAGCTAATTACTGGAAGAAAACCTGTGGATATGTCACGGCCATTGGGGGATGAGAGTCTAGTTCAATGGGCACGTCCGATGCTAAGTCATGCACTTGATGGAGAAGAGTTTGAATCGTTGGTGGACCCGAGACTCGGAAAGAACTACGTTGAGAGCGAGATGTTCAGGATGATCGAGGTTGCTGCTGCTTGCGTGAGACATTCAGCGACTAGGCGGCCTCGAATGGGACAGGTTGTTAGAGCATTTGATATGGTAGGCTCTTCGGATTTAACGAACGGAATGAGAGTGGGGGAAAGCGAGGCATTTAACTCTGCTCAACAATCTGCAGAAATCAAGTTTTTTAGGAGATTGGCATTTGGAAGCCAAGATTATAGTACAGATTTTATAGTCCAAGGCAGCTCAATAGTTTAA 2007 48.33 MATTSPPPISSPPPPGHSGGGPPPSDPVVPPPAESTPPPAFPPPPPQEPSPPPSLETTPPPPASTPPNLPATTPPPPSPSDSPPAAAPPPPPGSSASSPPPRSSPSPPSLSPPPRNVTTPPPQPNPPENSPPPPPSILPPEKSPSPPTPLRSPPPPPPPVSVPPENSPPPPSTLPPMRAPPPPQNDPPPDITSPPPPHEPSPAPPSIPSPAPPSGNQTENDSTPNASASSISTGNGSVGAVGVIAIGIAAGILVLSLLGLVLWCLRKKRQKVSGLTGYVMPSSRDSSPRSESPLMKVHSPMPPVGSGSGSNCLHSPADTNGLGNSRSLFTYEELATATNGFADANLLGEGGFGSVYKGNLSDGREVAVKELKIGSSQGEREFKAEVDIIRRIHHRHLVTLVGYCVSVSRRLLVYDYVPNDTLHYHLHGKNGPILDWARRIKIAGGAARGLAYLHEDCHPRIIHRDIKSSNILLNENFEAQVSDFGLAKLAPDANTHVTTRVMGTFGYVAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDMSRPLGDESLVQWARPMLSHALDGEEFESLVDPRLGKNYVESEMFRMIEVAAACVRHSATRRPRMGQVVRAFDMVGSSDLTNGMRVGESEAFNSAQQSAEIKFFRRLAFGSQDYSTDFIVQGSSIV 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28206869 28210270 + Bda028366.1 Bda07g01515 10405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01515 668 SMART serkin_6 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01515 668 MobiDBLite consensus disorder prediction 213 231 - -
Bda07g01515 668 CDD STKc_IRAK 347 612 - -
Bda07g01515 668 PANTHER BNACNNG34790D PROTEIN 56 664 - -
Bda07g01515 668 Pfam Protein kinase domain 343 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01515 668 MobiDBLite consensus disorder prediction 1 231 - -
Bda07g01515 668 Gene3D Transferase(Phosphotransferase) domain 1 417 631 - -
Bda07g01515 668 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01515 668 Gene3D Phosphorylase Kinase; domain 1 313 416 - -
Bda07g01515 668 SUPERFAMILY Protein kinase-like (PK-like) 324 613 IPR011009 -
Bda07g01515 668 MobiDBLite consensus disorder prediction 1 212 - -
Bda07g01515 668 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Bda07g01515 668 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 56 664 - -
Bda07g01515 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01515 Bda-Chr7:28206869 Bda07g01069 Bda-Chr7:12532683 0 dispersed
Bda08g00992 Bda-Chr8:20234896 Bda07g01515 Bda-Chr7:28206869 3.73E-64 dispersed
Bda10g00777 Bda-Chr10:42197785 Bda07g01515 Bda-Chr7:28206869 3.38E-101 dispersed
Bda10g01025 Bda-Chr10:44365833 Bda07g01515 Bda-Chr7:28206869 3.08E-169 dispersed
Bda12g00695 Bda-Chr12:33589751 Bda07g01515 Bda-Chr7:28206869 3.80E-101 dispersed
Bda12g01075 Bda-Chr12:42471649 Bda07g01515 Bda-Chr7:28206869 8.48E-101 dispersed
Bda13g00238 Bda-Chr13:2968627 Bda07g01515 Bda-Chr7:28206869 8.23E-79 dispersed
Bda07g01515 Bda-Chr7:28206869 Bda11g01113 Bda-Chr11:11007129 4.13E-159 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69734 PF00069 Pkinase 6.80E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01515 - - mnt:21409212 660.603