Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01526 ATGGATGGAAGTAGCGTTGATGAAAGCTCGGCAAGCGAATCCACCTCTATTTCTCCTCTTAGTCCGCTCGCTTTTCAGGTCACAAAGTGTTCTTCGCCGCCGGTGGGTCTGTCAAGAATGGGCAGCGGATCGAGTGTCGTCGTCGACTCCGATCCGTCCGCCGGCGTTGAGGCGGAGTCGAGAAAGCTGCCTTCTTCCAGGTTCAAGGGGGTGGTACCGCAGCCGAATGGGCGGTGGGGGGCGCAGATTTACGAGAAGCACCAGCGAGTCTGGCTCGGCACTTTCAACGAGGAGTATGAGGCAGCCAGAGCCTACGACATCGCCGCCCAACGCTTCCGCGGTCGCGATGCCGTTACTAATTTCAAGCCACTTGCCGACACCGCTGACGACGAAATCGAGTCGGCGTTTCTTAGTTCCCATTCGAAATCTGAGATTGTCGATATGCTACGTAAGCATACTTACAGCGATGAGCTGCAGCAGAGCAAACGAAAAAATGGGTTACTCGACGGTTCCGGGAAACGAAGATCCCTCGGGCTAACTGGCTCAGGACAGGACCGAGACTCCAAGACCCGTGAACTACTTTTCGAGAAGGCCGTGACGCCCAGCGACGTCGGAAAACTGAACCGCCTGGTGATCCCGAAGCAGCACGCGGAGAAACATTTCCCGTTGCAGAGCGGAACCGCGTCATCCAAAGGCGTGCTTCTCAACCTCGAGGATATCGGAGGAAAAGTATGGCGATTCCGCTACTCCTACTGGAATAGCAGCCAAAGCTACGTTCTGACAAAAGGGTGGAGCCGCTTCGTCAAGGAGAAGAATCTCCACGCCGGAGACGTAGTCACCTTTCTCCGGTCAACCGGACAGGAGAAACAGCTCTACATTGACTTTAAGGCTCGGAATGGATCGGCGGCGATGATGAGTGAATCAAACCCAGCGCCACCAGTTCAAGCAGTAAGACTCTTTGGGGTGAACATTTTGAAAGTACCTGGACATGGTGGTAGTAATATGGACAGCGCCGTCGCAATGGGTGGTTGCCATGGGAAAAGAATAAGAGATCAGGTTGAGCTTTTGGCTTTAGAATGCAGTAAAAAACAAAGGGTAGTCGGAGCTTTGTGA 1113 53.82 MDGSSVDESSASESTSISPLSPLAFQVTKCSSPPVGLSRMGSGSSVVVDSDPSAGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEYEAARAYDIAAQRFRGRDAVTNFKPLADTADDEIESAFLSSHSKSEIVDMLRKHTYSDELQQSKRKNGLLDGSGKRRSLGLTGSGQDRDSKTRELLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGTASSKGVLLNLEDIGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLHAGDVVTFLRSTGQEKQLYIDFKARNGSAAMMSESNPAPPVQAVRLFGVNILKVPGHGGSNMDSAVAMGGCHGKRIRDQVELLALECSKKQRVVGAL 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28386869 28387981 + Bda028379.1 Bda07g01526 10416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01526 370 Pfam B3 DNA binding domain 195 295 IPR003340 GO:0003677
Bda07g01526 370 CDD B3_DNA 194 281 IPR003340 GO:0003677
Bda07g01526 370 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 370 IPR044800 GO:0003700
Bda07g01526 370 ProSiteProfiles B3 DNA-binding domain profile. 195 299 IPR003340 GO:0003677
Bda07g01526 370 MobiDBLite consensus disorder prediction 156 170 - -
Bda07g01526 370 Gene3D AP2/ERF domain 66 123 IPR036955 GO:0003700|GO:0006355
Bda07g01526 370 SMART B3_2 195 299 IPR003340 GO:0003677
Bda07g01526 370 PANTHER PROTEIN RAV1, PUTATIVE-RELATED 1 370 - -
Bda07g01526 370 SUPERFAMILY DNA-binding domain 66 122 IPR016177 GO:0003677
Bda07g01526 370 MobiDBLite consensus disorder prediction 156 190 - -
Bda07g01526 370 Pfam AP2 domain 67 114 IPR001471 GO:0003700|GO:0006355
Bda07g01526 370 SMART rav1_2 67 128 IPR001471 GO:0003700|GO:0006355
Bda07g01526 370 Gene3D - 183 309 IPR015300 -
Bda07g01526 370 MobiDBLite consensus disorder prediction 33 53 - -
Bda07g01526 370 SUPERFAMILY DNA-binding pseudobarrel domain 191 293 IPR015300 -
Bda07g01526 370 CDD AP2 66 121 IPR001471 GO:0003700|GO:0006355
Bda07g01526 370 ProSiteProfiles AP2/ERF domain profile. 67 122 IPR001471 GO:0003700|GO:0006355
Bda07g01526 370 MobiDBLite consensus disorder prediction 33 49 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02092 Bda07g01526 CCT
Bda01g02092 Bda07g01526 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01526 Bda-Chr7:28386869 Bda11g00402 Bda-Chr11:4346008 7.46E-42 dispersed
Bda01g01056 Bda-Chr1:44728740 Bda07g01526 Bda-Chr7:28386869 4.73E-13 transposed
Bda07g00726 Bda-Chr7:8559227 Bda07g01526 Bda-Chr7:28386869 5.37E-55 transposed
Bda10g01143 Bda-Chr10:45485378 Bda07g01526 Bda-Chr7:28386869 0 transposed
Bda12g00689 Bda-Chr12:33397373 Bda07g01526 Bda-Chr7:28386869 2.13E-11 transposed
Bda01g02092 Bda-Chr1:57063080 Bda07g01526 Bda-Chr7:28386869 2.55E-152 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16191 PF02362 B3 4.80E-29 CL0405 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01526 K09287 - pvy:116107511 468.774