Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01526 | ATGGATGGAAGTAGCGTTGATGAAAGCTCGGCAAGCGAATCCACCTCTATTTCTCCTCTTAGTCCGCTCGCTTTTCAGGTCACAAAGTGTTCTTCGCCGCCGGTGGGTCTGTCAAGAATGGGCAGCGGATCGAGTGTCGTCGTCGACTCCGATCCGTCCGCCGGCGTTGAGGCGGAGTCGAGAAAGCTGCCTTCTTCCAGGTTCAAGGGGGTGGTACCGCAGCCGAATGGGCGGTGGGGGGCGCAGATTTACGAGAAGCACCAGCGAGTCTGGCTCGGCACTTTCAACGAGGAGTATGAGGCAGCCAGAGCCTACGACATCGCCGCCCAACGCTTCCGCGGTCGCGATGCCGTTACTAATTTCAAGCCACTTGCCGACACCGCTGACGACGAAATCGAGTCGGCGTTTCTTAGTTCCCATTCGAAATCTGAGATTGTCGATATGCTACGTAAGCATACTTACAGCGATGAGCTGCAGCAGAGCAAACGAAAAAATGGGTTACTCGACGGTTCCGGGAAACGAAGATCCCTCGGGCTAACTGGCTCAGGACAGGACCGAGACTCCAAGACCCGTGAACTACTTTTCGAGAAGGCCGTGACGCCCAGCGACGTCGGAAAACTGAACCGCCTGGTGATCCCGAAGCAGCACGCGGAGAAACATTTCCCGTTGCAGAGCGGAACCGCGTCATCCAAAGGCGTGCTTCTCAACCTCGAGGATATCGGAGGAAAAGTATGGCGATTCCGCTACTCCTACTGGAATAGCAGCCAAAGCTACGTTCTGACAAAAGGGTGGAGCCGCTTCGTCAAGGAGAAGAATCTCCACGCCGGAGACGTAGTCACCTTTCTCCGGTCAACCGGACAGGAGAAACAGCTCTACATTGACTTTAAGGCTCGGAATGGATCGGCGGCGATGATGAGTGAATCAAACCCAGCGCCACCAGTTCAAGCAGTAAGACTCTTTGGGGTGAACATTTTGAAAGTACCTGGACATGGTGGTAGTAATATGGACAGCGCCGTCGCAATGGGTGGTTGCCATGGGAAAAGAATAAGAGATCAGGTTGAGCTTTTGGCTTTAGAATGCAGTAAAAAACAAAGGGTAGTCGGAGCTTTGTGA | 1113 | 53.82 | MDGSSVDESSASESTSISPLSPLAFQVTKCSSPPVGLSRMGSGSSVVVDSDPSAGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEYEAARAYDIAAQRFRGRDAVTNFKPLADTADDEIESAFLSSHSKSEIVDMLRKHTYSDELQQSKRKNGLLDGSGKRRSLGLTGSGQDRDSKTRELLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGTASSKGVLLNLEDIGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLHAGDVVTFLRSTGQEKQLYIDFKARNGSAAMMSESNPAPPVQAVRLFGVNILKVPGHGGSNMDSAVAMGGCHGKRIRDQVELLALECSKKQRVVGAL | 370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 28386869 | 28387981 | + | Bda028379.1 | Bda07g01526 | 10416 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01526 | 370 | Pfam | B3 DNA binding domain | 195 | 295 | IPR003340 | GO:0003677 | |
Bda07g01526 | 370 | CDD | B3_DNA | 194 | 281 | IPR003340 | GO:0003677 | |
Bda07g01526 | 370 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 1 | 370 | IPR044800 | GO:0003700 | |
Bda07g01526 | 370 | ProSiteProfiles | B3 DNA-binding domain profile. | 195 | 299 | IPR003340 | GO:0003677 | |
Bda07g01526 | 370 | MobiDBLite | consensus disorder prediction | 156 | 170 | - | - | |
Bda07g01526 | 370 | Gene3D | AP2/ERF domain | 66 | 123 | IPR036955 | GO:0003700|GO:0006355 | |
Bda07g01526 | 370 | SMART | B3_2 | 195 | 299 | IPR003340 | GO:0003677 | |
Bda07g01526 | 370 | PANTHER | PROTEIN RAV1, PUTATIVE-RELATED | 1 | 370 | - | - | |
Bda07g01526 | 370 | SUPERFAMILY | DNA-binding domain | 66 | 122 | IPR016177 | GO:0003677 | |
Bda07g01526 | 370 | MobiDBLite | consensus disorder prediction | 156 | 190 | - | - | |
Bda07g01526 | 370 | Pfam | AP2 domain | 67 | 114 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g01526 | 370 | SMART | rav1_2 | 67 | 128 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g01526 | 370 | Gene3D | - | 183 | 309 | IPR015300 | - | |
Bda07g01526 | 370 | MobiDBLite | consensus disorder prediction | 33 | 53 | - | - | |
Bda07g01526 | 370 | SUPERFAMILY | DNA-binding pseudobarrel domain | 191 | 293 | IPR015300 | - | |
Bda07g01526 | 370 | CDD | AP2 | 66 | 121 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g01526 | 370 | ProSiteProfiles | AP2/ERF domain profile. | 67 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g01526 | 370 | MobiDBLite | consensus disorder prediction | 33 | 49 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g02092 | Bda07g01526 | CCT | |
Bda01g02092 | Bda07g01526 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01526 | Bda-Chr7:28386869 | Bda11g00402 | Bda-Chr11:4346008 | 7.46E-42 | dispersed | |
Bda01g01056 | Bda-Chr1:44728740 | Bda07g01526 | Bda-Chr7:28386869 | 4.73E-13 | transposed | |
Bda07g00726 | Bda-Chr7:8559227 | Bda07g01526 | Bda-Chr7:28386869 | 5.37E-55 | transposed | |
Bda10g01143 | Bda-Chr10:45485378 | Bda07g01526 | Bda-Chr7:28386869 | 0 | transposed | |
Bda12g00689 | Bda-Chr12:33397373 | Bda07g01526 | Bda-Chr7:28386869 | 2.13E-11 | transposed | |
Bda01g02092 | Bda-Chr1:57063080 | Bda07g01526 | Bda-Chr7:28386869 | 2.55E-152 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16191 | PF02362 | B3 | 4.80E-29 | CL0405 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01526 | K09287 | - | pvy:116107511 | 468.774 |