Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01528 ATGGAAGGGGTGGAGGTTGGAGTGGATTTCAGAAAATATGTCGAGGCGCTGGAAGAAGAACGCCGGAAGATACAGGTTTTCCGGCGAGAGCTGCCTCTGTGTTTGGAGCTCATTACGCAAGCTATTGATTCTTGCCGGCAGCAGTTGTCTGGGACGACAACGGAGTATTTCAACAGAGGCCAATCGGAATGCTCAGAGCATAATTCCGGTGAAGTTCCAGTTTTGGAGGAATTTATTCCGATTAAGAGGTCAGATTTAGTTGATGGAGATGAAGAATCCGACGAGGAGAACAAGATGAATGATAAGAAGGAAGAGGCTCGATCAGATTGGCTTAGATCTGCTCAGCTTTGGAATCAATCCGCCGATTCACCAGTCAAAGAGGATATCCCAAAGAAGAAGTGTATTGTTAGAAATGGTGGAGCTTTCCAGCCATTTCAACGGGATAAGACTGAAGTGATCAAGGCCAAACACCAGTCTCCAACTCCTGCAGCTGCTGCCAGTTCGACGGCAGAAACAGCCTCCGGCAGCGGTGGTGGAAGCGGCAAACTGGAGGAGAAGGAAGGAGGTGAGCAAACACAAAGAAAGCAGCGGCGGTGCTGGTCGCCGGAGTTGCATAAGCGGTTTTTGCATGCTCTTCAACAGCTAGGAGGCTCCCACGCTGCGACTCCAAAGCAAATCAGAGAGCTAATGAAGGTAGATGGTCTAACAAATGATGAAGTCAAAAGTCACTTACAGAAGTATCGGCTTCATACGAGAAGACCCGGTTCAGCAATCCAAAACAATGGAAGTCCACAACCTCAGTTTGTGGTGGTTGGAGGCATTTGGGTTCCCCCGCCACCGGCCACGGCAGAAACAATCACCGGTGGCACAACCAACCGTGTTTACGCTCCGGTGGCAGCTCGACCGGATTCGGGATCTGAAGAATCAGGCAGTGCAATAGAAAGGGAAGTGGCTAGAGGTAAAGGGTTAAAAGAGAGAAGGGTAAGTGGAAGTGAAGCAGGAGTAGAGTCCAGTTCCACGGCCACTTCAGTTTCTCATTTGTAA 1044 49.62 MEGVEVGVDFRKYVEALEEERRKIQVFRRELPLCLELITQAIDSCRQQLSGTTTEYFNRGQSECSEHNSGEVPVLEEFIPIKRSDLVDGDEESDEENKMNDKKEEARSDWLRSAQLWNQSADSPVKEDIPKKKCIVRNGGAFQPFQRDKTEVIKAKHQSPTPAAAASSTAETASGSGGGSGKLEEKEGGEQTQRKQRRCWSPELHKRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPGSAIQNNGSPQPQFVVVGGIWVPPPPATAETITGGTTNRVYAPVAARPDSGSEESGSAIEREVARGKGLKERRVSGSEAGVESSSTATSVSHL 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28404371 28406160 + Bda028381.1 Bda07g01528 10418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01528 347 Gene3D - 194 252 - -
Bda07g01528 347 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 195 250 IPR006447 GO:0003677
Bda07g01528 347 MobiDBLite consensus disorder prediction 308 331 - -
Bda07g01528 347 MobiDBLite consensus disorder prediction 152 200 - -
Bda07g01528 347 MobiDBLite consensus disorder prediction 183 200 - -
Bda07g01528 347 SUPERFAMILY Homeodomain-like 192 253 IPR009057 -
Bda07g01528 347 MobiDBLite consensus disorder prediction 83 109 - -
Bda07g01528 347 MobiDBLite consensus disorder prediction 300 347 - -
Bda07g01528 347 MobiDBLite consensus disorder prediction 332 347 - -
Bda07g01528 347 MobiDBLite consensus disorder prediction 161 176 - -
Bda07g01528 347 PANTHER TRANSCRIPTION FACTOR HHO2 10 343 - -
Bda07g01528 347 Coils Coil 10 30 - -
Bda07g01528 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 192 252 IPR017930 -
Bda07g01528 347 Pfam Myb-like DNA-binding domain 197 248 IPR001005 -
Bda07g01528 347 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 10 343 IPR044787 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02090 Bda07g01528 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01870 Bda-Chr1:54785714 Bda07g01528 Bda-Chr7:28404371 4.85E-73 dispersed
Bda07g01528 Bda-Chr7:28404371 Bda11g00125 Bda-Chr11:1693719 1.51E-74 dispersed
Bda01g02090 Bda-Chr1:57054572 Bda07g01528 Bda-Chr7:28404371 1.15E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16192 PF00249 Myb_DNA-binding 4.20E-07 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01528 - - vvi:100257723 343.584