Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01560 ATGGCGGCTTCTCTCATTCGCCTCCATTTCCATGACTGCTTTGTCCAGGGATGCGACGCCTCCATCTTGCTCGACGATACTGCTTCAATGGTGGGCGAGCAGAATGCTAACCCTAATAGAGATTCTGCTAGAGGTTACGAAGTTATTGCCGCGGCAAAGGCCAAAGTGGAAGCCATCTGTCCGGGTGTTGTTTCTTGCGCAGACATTCTTGCGGTGGCTGCCAGAGACTTTTCCTTCGCCGTCGGAGGTCCATCTTGGACGGTGAAGCTCGGAAGAAGAGATTCCACGTCTGCTAGTCGGGCTCTTGCAGAAAGCAACCTTCCCGGTTTCAGAGAAGGCCTTGGCAGACTCATCTCCATGTTTGCTGATAAAGGTCTAACCGCAAGAGATATGGTGGCATTATCAGGTGCACACACCATTGGACAAACTCAGTGCTTCACATTTCGTCAGAGAATATACAGCAACGAGAGCTCCATCGATGCAGGTTTTGCCACCACTCGCCGGCGTGCTTGCCCTTCAGCCGGCGGAAGTACGAATTTGGGAGCTCTTGACTTGGTTACTCCAAACTCTTTCGACAACAACTACTTCAAAAATCTGCTTCAGAAAAAGGGTTTGCTCGAAACTGATCAAGCTCTCTTTAATGGCGGATCTACAGACCCCATTGTTTCAGAGTACAGCAACAACCCTTCTACCTTCAAGTCTGATTTTGCTTCGGCCATGATCAAAATGGGAGACACTGAGCCTCTAACTGGATTAGCAGGGGAAATCAGAAAGATTTGCAGTGCAATTAACTGA 795 49.31 MAASLIRLHFHDCFVQGCDASILLDDTASMVGEQNANPNRDSARGYEVIAAAKAKVEAICPGVVSCADILAVAARDFSFAVGGPSWTVKLGRRDSTSASRALAESNLPGFREGLGRLISMFADKGLTARDMVALSGAHTIGQTQCFTFRQRIYSNESSIDAGFATTRRRACPSAGGSTNLGALDLVTPNSFDNNYFKNLLQKKGLLETDQALFNGGSTDPIVSEYSNNPSTFKSDFASAMIKMGDTEPLTGLAGEIRKICSAIN 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28929184 28929978 - Bda028421.1 Bda07g01560 10450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01560 264 Gene3D Peroxidase, domain 2 108 243 - -
Bda07g01560 264 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 SUPERFAMILY Heme-dependent peroxidases 1 264 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Bda07g01560 264 Gene3D - 1 264 - -
Bda07g01560 264 PANTHER PEROXIDASE 72-RELATED 1 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Bda07g01560 264 Pfam Peroxidase 1 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 ProSiteProfiles Plant heme peroxidase family profile. 1 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 CDD secretory_peroxidase 1 263 IPR033905 GO:0004601|GO:0042744
Bda07g01560 264 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Plant peroxidase signature 198 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Plant peroxidase signature 238 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PRINTS Plant peroxidase signature 182 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda07g01560 264 PANTHER PEROXIDASE 1 263 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01557 Bda-Chr7:28901635 Bda07g01560 Bda-Chr7:28929184 4.41E-155 dispersed
Bda07g01560 Bda-Chr7:28929184 Bda15g00285 Bda-Chr15:5621171 1.24E-109 dispersed
Bda07g01558 Bda-Chr7:28909815 Bda07g01560 Bda-Chr7:28929184 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01560 K00430 - csv:116403796 411.764