Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01568 ATGTCCATATTGTGCGCTTCCGATTGCTTCTCCGACCTTTTGTGCGATGAGGATTCATCCGGATTCTTGTCTAGAGATTCACTGGAATGCTCGCCGGAAATCGAGTGTGCTTCGGACGTTGAGGAGTTAATCGCTGCTTGTATCGAAGAGGAGAGGCAATTCGTGCCTGGTTTCGACTATTTCTCTCGATTTCAGACGAGTTCTCTGGACGCATCTGCCAGAGCGGATTCTGTTGCATGGATTCTCCTGGTTCAAGCCTACTATGGTTTCCATCCATTGACGGCGTATCTGGCTGTTAACTACTTCGATCGGTTCATCTATTCGCATTGTTTGCCGCAAGCAAATGGGTGGCCTTTGCAACTTTTATCTGTTGCTTGCTTGTCACTAGCAGCTAAAATGGAGGAGCCTTTGGCTCCTTGTTTATTGGACCTTCAGGTTGAGGGAGCCAAATATTTATTTGAACCCAAAACAATATGTAGGATGGAGCTTCTTGTGCTGAGAGTCCTAGATTGGCGGTTGAGATCCATAACGCCATACAATTTTATTGAATTCTTCGCGTTCAAGATTGATCCTACAGGAGCTTTCATCAGGTTTCTAATCTCAAGAGCCTCGGATATTATCTTATCCAATATCGGAGAAACTAGCTTCCTGGAATACCAACCATCATGCATAGCTGCCACAGCTTTACTTTGTGCAACAAATGAAATCCCAAGTTTACCTCTAGTTAATCCGGAAGATGCTGAATTATGGTGCAATGGATTAAGCAAAGAAAGACTCATCAAATGCTATCAGTTAACGCAAAAATTGGTGCTTCATGGTAGCCTTAGGAAGCCCCCTAAAATCTTACCGCAGCTCCGAGTTACACATCAGGCTGAAATGAGGCTGATTGACTCATCTCCTCTGCCCTTCTCGTCCTCATCCATGTCTCATAAGAGGAGAAAATTAAGTACCTGCTTGTGGGTAGTTAATGACAAAGGAAACTCAGAGTGA 990 44.34 MSILCASDCFSDLLCDEDSSGFLSRDSLECSPEIECASDVEELIAACIEEERQFVPGFDYFSRFQTSSLDASARADSVAWILLVQAYYGFHPLTAYLAVNYFDRFIYSHCLPQANGWPLQLLSVACLSLAAKMEEPLAPCLLDLQVEGAKYLFEPKTICRMELLVLRVLDWRLRSITPYNFIEFFAFKIDPTGAFIRFLISRASDIILSNIGETSFLEYQPSCIAATALLCATNEIPSLPLVNPEDAELWCNGLSKERLIKCYQLTQKLVLHGSLRKPPKILPQLRVTHQAEMRLIDSSPLPFSSSSMSHKRRKLSTCLWVVNDKGNSE 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29111521 29113776 - Bda028431.1 Bda07g01568 10458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01568 329 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
Bda07g01568 329 PANTHER CYCLINS 7 318 IPR039361 -
Bda07g01568 329 SMART Cyclin_C_2 176 299 IPR004367 -
Bda07g01568 329 CDD CYCLIN 74 166 IPR013763 -
Bda07g01568 329 Pfam Cyclin, C-terminal domain 176 272 IPR004367 -
Bda07g01568 329 Gene3D - 57 174 - -
Bda07g01568 329 Pfam Cyclin, N-terminal domain 45 173 IPR006671 -
Bda07g01568 329 Gene3D - 47 237 - -
Bda07g01568 329 SUPERFAMILY Cyclin-like 34 173 IPR036915 -
Bda07g01568 329 SMART cyclin_7 79 167 IPR013763 -
Bda07g01568 329 PANTHER CYCLIN-D1-1 7 318 - -
Bda07g01568 329 SUPERFAMILY Cyclin-like 158 269 IPR036915 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02234 Bda07g01568 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02234 Bda-Chr1:58166437 Bda07g01568 Bda-Chr7:29111521 1.67E-133 dispersed
Bda07g01568 Bda-Chr7:29111521 Bda08g00683 Bda-Chr8:7267972 2.28E-59 dispersed
Bda07g01568 Bda-Chr7:29111521 Bda11g01253 Bda-Chr11:13122638 1.60E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01568 K18810 - vvi:100255261 433.721