Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01573 ATGGCGACAAACGGCGTGGTTTCGTGGACGTCTAGGTTGGAAAAGATTGACAGTGGTTGCGGCGGTCGATTTTCGCCGTCTGATTCAGATGAAGTTCACGTTCTCGCCGTTGATGACAGTTTGATCGATCGGACGGTGATCGAGCGCTTGCTCAAAACTTCGTCCTGTAAAGTTACGGCGGTGGATAGCGGGAGGAGAGCTCTGCAATACCTCGGGTTGGACGAGGAAACAAGCTCCTCCGACGAGTACGATGGTGTGAAAGTGGACATGATCATCACTGATTATTGCATGCCCGGGATGACAGGCTTCGAGTTGCTTAAGAAAATTAAGGAATCATCTTCGCTGAGACAGATACCAGTGGTAATTATGTCGTCCGAAAACATATTAGCGCGAGTAGACAGGTGTTTGGAAGAGGGTGCAGAGGATTTCATAGTGAAACCGGTGAAATTATCAGATGTAGAACGGCTCAGGGATAACATGAGGAGAGAGGCCGTCAAAGACCCTATAAATGAAGTTAGCAGTGGGGTCCATAAGAGGAAAGTACGAGACTCTGCAGACGTGGTTTCATCACCACCGTCCATTTCATCGTCCTCGAGATCACCTTCATCTTGTTCACCTACGTCGCTCGACTCGCCGATCCGACGGCTCAAATTGACCACCACAGATTAA 669 49.18 MATNGVVSWTSRLEKIDSGCGGRFSPSDSDEVHVLAVDDSLIDRTVIERLLKTSSCKVTAVDSGRRALQYLGLDEETSSSDEYDGVKVDMIITDYCMPGMTGFELLKKIKESSSLRQIPVVIMSSENILARVDRCLEEGAEDFIVKPVKLSDVERLRDNMRREAVKDPINEVSSGVHKRKVRDSADVVSSPPSISSSSRSPSSCSPTSLDSPIRRLKLTTTD 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29161978 29163028 + Bda028436.1 Bda07g01573 10463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01573 222 MobiDBLite consensus disorder prediction 188 222 - -
Bda07g01573 222 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 23 211 - -
Bda07g01573 222 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 211 IPR045279 GO:0009736
Bda07g01573 222 Gene3D - 32 194 - -
Bda07g01573 222 ProSiteProfiles Response regulatory domain profile. 33 161 IPR001789 GO:0000160
Bda07g01573 222 SMART REC_2 32 157 IPR001789 GO:0000160
Bda07g01573 222 CDD REC_typeA_ARR 34 156 - -
Bda07g01573 222 SUPERFAMILY CheY-like 32 157 IPR011006 -
Bda07g01573 222 MobiDBLite consensus disorder prediction 172 222 - -
Bda07g01573 222 Pfam Response regulator receiver domain 34 153 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01573 Bda-Chr7:29161978 Bda10g01007 Bda-Chr10:44240060 9.69E-108 dispersed
Bda07g01573 Bda-Chr7:29161978 Bda11g01678 Bda-Chr11:50923039 2.22E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16194 PF00072 Response_reg 2.20E-22 CL0304 Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01573 K14492 - mnt:21410451 275.789