Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01573 | ATGGCGACAAACGGCGTGGTTTCGTGGACGTCTAGGTTGGAAAAGATTGACAGTGGTTGCGGCGGTCGATTTTCGCCGTCTGATTCAGATGAAGTTCACGTTCTCGCCGTTGATGACAGTTTGATCGATCGGACGGTGATCGAGCGCTTGCTCAAAACTTCGTCCTGTAAAGTTACGGCGGTGGATAGCGGGAGGAGAGCTCTGCAATACCTCGGGTTGGACGAGGAAACAAGCTCCTCCGACGAGTACGATGGTGTGAAAGTGGACATGATCATCACTGATTATTGCATGCCCGGGATGACAGGCTTCGAGTTGCTTAAGAAAATTAAGGAATCATCTTCGCTGAGACAGATACCAGTGGTAATTATGTCGTCCGAAAACATATTAGCGCGAGTAGACAGGTGTTTGGAAGAGGGTGCAGAGGATTTCATAGTGAAACCGGTGAAATTATCAGATGTAGAACGGCTCAGGGATAACATGAGGAGAGAGGCCGTCAAAGACCCTATAAATGAAGTTAGCAGTGGGGTCCATAAGAGGAAAGTACGAGACTCTGCAGACGTGGTTTCATCACCACCGTCCATTTCATCGTCCTCGAGATCACCTTCATCTTGTTCACCTACGTCGCTCGACTCGCCGATCCGACGGCTCAAATTGACCACCACAGATTAA | 669 | 49.18 | MATNGVVSWTSRLEKIDSGCGGRFSPSDSDEVHVLAVDDSLIDRTVIERLLKTSSCKVTAVDSGRRALQYLGLDEETSSSDEYDGVKVDMIITDYCMPGMTGFELLKKIKESSSLRQIPVVIMSSENILARVDRCLEEGAEDFIVKPVKLSDVERLRDNMRREAVKDPINEVSSGVHKRKVRDSADVVSSPPSISSSSRSPSSCSPTSLDSPIRRLKLTTTD | 222 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 29161978 | 29163028 | + | Bda028436.1 | Bda07g01573 | 10463 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01573 | 222 | MobiDBLite | consensus disorder prediction | 188 | 222 | - | - | |
Bda07g01573 | 222 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED | 23 | 211 | - | - | |
Bda07g01573 | 222 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 23 | 211 | IPR045279 | GO:0009736 | |
Bda07g01573 | 222 | Gene3D | - | 32 | 194 | - | - | |
Bda07g01573 | 222 | ProSiteProfiles | Response regulatory domain profile. | 33 | 161 | IPR001789 | GO:0000160 | |
Bda07g01573 | 222 | SMART | REC_2 | 32 | 157 | IPR001789 | GO:0000160 | |
Bda07g01573 | 222 | CDD | REC_typeA_ARR | 34 | 156 | - | - | |
Bda07g01573 | 222 | SUPERFAMILY | CheY-like | 32 | 157 | IPR011006 | - | |
Bda07g01573 | 222 | MobiDBLite | consensus disorder prediction | 172 | 222 | - | - | |
Bda07g01573 | 222 | Pfam | Response regulator receiver domain | 34 | 153 | IPR001789 | GO:0000160 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01573 | Bda-Chr7:29161978 | Bda10g01007 | Bda-Chr10:44240060 | 9.69E-108 | dispersed | |
Bda07g01573 | Bda-Chr7:29161978 | Bda11g01678 | Bda-Chr11:50923039 | 2.22E-67 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16194 | PF00072 | Response_reg | 2.20E-22 | CL0304 | Bda | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01573 | K14492 | - | mnt:21410451 | 275.789 |