Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01602 | CAAACTATGTCCAGCCCTGATTCGCCTCCACAGAATAACACGGCTACGCAGGCAGCGAGCCCTCCTCCACTGATTTCTCCTCCTCCGCCAGCAGACAATAGCAGTGCTCCTCCGTCTCCTGTAACACCTGTTAGCTCAAACTCTTCCTCTCCGCCGCCAATTTCACCTTCACCGCCTTTGCTATCCCCGCCACCCCCATCAAATCCTCCTCCCGTTCCAGATTCAGGACCTCCTCAAGCCTCATCACCTCCTCCATCTCCGCCAAATTCGAAGGCTTCACCACATTCGCCGCCCACGTCATTTTCCGGGGCCACTTCTCCTCCTCCTCCTTATCAATCTCCCCCATCATCCGGAGGTCAACAATCTCAACCTGCTCCAAACGTTCCTAATCCAACTCCAGGTTCTGGAAGTCCTCAATTATCTCCACCGCCTCCGCTCTCGAACACTCCACAAATAAGTGTACCTTCTCCCGTAATTCCTGCTCCTGGTTTGCCTCAAGAAAAATCTCCTCCTCCACTAAAGCTATTTCCTCCATCAGCTTTTGGTGTACCTCCCCCTCCTCCCTCAACATCGCGCACAAATAATCTGAGACCACCTTCCAAATCAGCAAAATCACCTCCAACTGAATCTGAGTCGAATGGAAACACAGGGACCGCCATAGCTGTGGCAGAGGGCTTTTATTCTCAAGCTCCGCCTTCTTTTACGAACACATATGGAAGTCAAATACCAAATGCATATAATGGTGGAGGGGCTGAATCCGGAGTCATAAGCAATTCTAAAACCCACTTCAGCTACGAGGAGTTGATGGAAATTACACACGGGTTTTCTCGTCAAAATGTTTTAGGAGAGGGTGGTTTTGGATGCGTTTACAAAGGGTGGCTTCCAGATGGAAAAGTGGTAGCAGTTAAGATGCTCAAGGCAGGTAGTGGACAGGGTGAAAGGGAATTCAGGGCAGAAGTTGAAATTATTAGTCGCGTTCATCATCGACATTTGGTTTCTCTAGTCGGGTATTGCATCTCCGAGCAAAACAGATTACTCATCTATGAATTTGTTCCAAATAAGACTCTTGAGAATCACTTGCATGGCCATCCAAAAATTATTCATCGAGATATAAAGTCAGCAAATATTCTGTTGGATGACGCATTTGAGGCACAGGCACGTGTTGCAGATTTTGGACTTGCCAAACTAACTAATGACATTTCTACTCACGTTTCAACTCGAGTCATGGGAACATTTGGTGGGAAACTGACAGATAGGTCGGATGTGTTCTCTTTTGGGGTTGTGCTTCTTGAGCTTATAACAGGGCGCAAACCGGTTGACACAACTCAGCCTTTGGGGGACGAGAGTTTAGTTGAATGGGCTCGTCCACTCCTTATTGATGCACTTGAAACTCTTGATTTTAGAGAACTGGTAGATCCAAGACTTGAAAGGCGTTATGTTGAAAGCGAAATGGTTAGAATGATCGAAGCAGCTGCTGCTTGTATTCGTCATTCGGCTCCAAAACGACCTCGCATGGCACAGGTGGTGAGGGCATTGGATACTGAAAGTGAAATGTCTGACATTTCCAATGGAGTGAAATTTGGGCAAAGCACCATGTATGATTCTGGTCAGTACAACCAAGACATTTCCAGATTCAGAAAGATGGCTCTTGAGCTTACCAAAGAAAGCTCTGAATATGAGCTTTGCAGTGGAGAATACAACTCTCGAGAATTTTCACAATCCACGGATTCATCTATTTATCGAGATGGGTCGAGCAGCGAATCAGAAACCAAAGCATTCAATTTACGCAGTAGCAATCAAAGATATATCCAACCTCAACACCCCTACAATAATCGACGAGATTTCTTGTAA | 1851 | 46.41 | QTMSSPDSPPQNNTATQAASPPPLISPPPPADNSSAPPSPVTPVSSNSSSPPPISPSPPLLSPPPPSNPPPVPDSGPPQASSPPPSPPNSKASPHSPPTSFSGATSPPPPYQSPPSSGGQQSQPAPNVPNPTPGSGSPQLSPPPPLSNTPQISVPSPVIPAPGLPQEKSPPPLKLFPPSAFGVPPPPPSTSRTNNLRPPSKSAKSPPTESESNGNTGTAIAVAEGFYSQAPPSFTNTYGSQIPNAYNGGGAESGVISNSKTHFSYEELMEITHGFSRQNVLGEGGFGCVYKGWLPDGKVVAVKMLKAGSGQGEREFRAEVEIISRVHHRHLVSLVGYCISEQNRLLIYEFVPNKTLENHLHGHPKIIHRDIKSANILLDDAFEAQARVADFGLAKLTNDISTHVSTRVMGTFGGKLTDRSDVFSFGVVLLELITGRKPVDTTQPLGDESLVEWARPLLIDALETLDFRELVDPRLERRYVESEMVRMIEAAAACIRHSAPKRPRMAQVVRALDTESEMSDISNGVKFGQSTMYDSGQYNQDISRFRKMALELTKESSEYELCSGEYNSREFSQSTDSSIYRDGSSSESETKAFNLRSSNQRYIQPQHPYNNRRDFL | 616 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 29691199 | 29694577 | + | Bda028471.1 | Bda07g01602 | 10492 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01602 | 616 | SMART | serkin_6 | 275 | 512 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda07g01602 | 616 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 363 | 581 | - | - | |
Bda07g01602 | 616 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 366 | 378 | IPR008271 | GO:0004672|GO:0006468 | |
Bda07g01602 | 616 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED | 231 | 362 | - | - | |
Bda07g01602 | 616 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 231 | 362 | - | - | |
Bda07g01602 | 616 | ProSitePatterns | Protein kinases ATP-binding region signature. | 281 | 303 | IPR017441 | GO:0005524 | |
Bda07g01602 | 616 | MobiDBLite | consensus disorder prediction | 44 | 94 | - | - | |
Bda07g01602 | 616 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bda07g01602 | 616 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED | 363 | 581 | - | - | |
Bda07g01602 | 616 | MobiDBLite | consensus disorder prediction | 1 | 216 | - | - | |
Bda07g01602 | 616 | MobiDBLite | consensus disorder prediction | 572 | 607 | - | - | |
Bda07g01602 | 616 | Pfam | Protein tyrosine and serine/threonine kinase | 365 | 512 | IPR001245 | GO:0004672|GO:0006468 | |
Bda07g01602 | 616 | Pfam | Protein tyrosine and serine/threonine kinase | 278 | 363 | IPR001245 | GO:0004672|GO:0006468 | |
Bda07g01602 | 616 | MobiDBLite | consensus disorder prediction | 21 | 37 | - | - | |
Bda07g01602 | 616 | MobiDBLite | consensus disorder prediction | 101 | 115 | - | - | |
Bda07g01602 | 616 | MobiDBLite | consensus disorder prediction | 126 | 193 | - | - | |
Bda07g01602 | 616 | SUPERFAMILY | Protein kinase-like (PK-like) | 260 | 510 | IPR011009 | - | |
Bda07g01602 | 616 | Gene3D | Transferase(Phosphotransferase) domain 1 | 357 | 527 | - | - | |
Bda07g01602 | 616 | Gene3D | Phosphorylase Kinase; domain 1 | 245 | 350 | - | - | |
Bda07g01602 | 616 | ProSiteProfiles | Protein kinase domain profile. | 275 | 518 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda07g01602 | 616 | MobiDBLite | consensus disorder prediction | 194 | 216 | - | - | |
Bda07g01602 | 616 | MobiDBLite | consensus disorder prediction | 572 | 616 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01602 | Bda-Chr7:29691199 | Bda11g01113 | Bda-Chr11:11007129 | 1.01E-130 | dispersed | |
Bda10g01025 | Bda-Chr10:44365833 | Bda07g01602 | Bda-Chr7:29691199 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69735 | PF07714 | PK_Tyr_Ser-Thr | 1.70E-12 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01602 | - | - | egr:104433531 | 536.184 |