Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01667 | ATGGAGACCCAGTTCCATCATAATCTTTTCGAAAGGCGCTCTCTTTTAAAATCCAAGACTCCTGCTGTCAAATGGCTCAAAGAATGGGTACCCCAAGATGTTGTAGCAACCGGAGGAAAGTGCTCTCTTTTCAAATGGGTCAGAGAGGATACGTTGAAGGCCTTAACAGAGAAGGCAAACCAACCAGAGGCACCTGATCCAGAACCAGAACCAACGACTGAAGTGCTTTTCTTTTGTAGCTATGATGGCTGCGGCAAGACATTTATCGATGCTGGTGCTTTGAGAAAGCATTCTCACATCCATGGCGAGAGGCAATACGTTTGTCATTATGATGGATGTGGAAAGAAATTTCTGGATAGTTCAAAGTTGAAACGACATTTTCTTATCCATACAGGAGAAAGAGATTTTGTGTGCCCTCATGAAGGCTGCGGGAAGGCATTCTCCCTGGATTTCAACTTAAGGTCGCACATGAAAACACACTCGCAAGAAAACTACCATATCTGCCCTTACCAGGATTGTGGAAAGAGATTTGCTCATGAATACAAGCTAAAGAACCACATTGCATCTCACCATGAAAAGAATGTAACCCCGGAATTGCCAAAATTTACGCCACATTTGGAGAAGCAAACCAAGGTTTCAAAGGCTCCTGCTGCAGCATACGGTTCTGCATCTTCTGATCGACCTTATGCTTGTCCATACGAAGGTTGCGAAAAGGCATACATACACGAATACAAGCTCAAACTTCATCTAAGGAGAGAGCATCCTGGTCACATGTACGATGAAAATGCAGATAATGGCATATCGAATGCTGATAATGACATGGACGAAGCTAGTGACCCCGAAGGGTTTGGAGGAAAACGTGTAAACAGCAAGAGCCAGAAACAGAGCAGTAGATCTAAACCAAGCCAGAAGTTGCCACAGGCAAAAGTTTCAAAGCGGAAGGGCTCAACTCCGGCTTCTGCTCCTCAGGAGCATGCACTAAAAAAACCATGGCCGGCCAGAGAAGAAGCTTATGAGGAAGAAGATAGCGAAGAAACAGAGGAGGACCGAGATGAGGATGGATGGAGATACGATAACAATGAAGACGAAGACGAAGAAGAAACGGAATACGAAGATTAA | 1119 | 44.59 | METQFHHNLFERRSLLKSKTPAVKWLKEWVPQDVVATGGKCSLFKWVREDTLKALTEKANQPEAPDPEPEPTTEVLFFCSYDGCGKTFIDAGALRKHSHIHGERQYVCHYDGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYQDCGKRFAHEYKLKNHIASHHEKNVTPELPKFTPHLEKQTKVSKAPAAAYGSASSDRPYACPYEGCEKAYIHEYKLKLHLRREHPGHMYDENADNGISNADNDMDEASDPEGFGGKRVNSKSQKQSSRSKPSQKLPQAKVSKRKGSTPASAPQEHALKKPWPAREEAYEEEDSEETEEDRDEDGWRYDNNEDEDEEETEYED | 372 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 30947663 | 30951018 | - | Bda028551.1 | Bda07g01667 | 10557 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01667 | 372 | PANTHER | BNAA03G13270D PROTEIN | 3 | 371 | - | - | |
Bda07g01667 | 372 | Pfam | Zinc finger, C2H2 type | 166 | 190 | IPR013087 | - | |
Bda07g01667 | 372 | Pfam | Zinc finger, C2H2 type | 136 | 160 | IPR013087 | - | |
Bda07g01667 | 372 | Gene3D | Classic Zinc Finger | 204 | 269 | - | - | |
Bda07g01667 | 372 | MobiDBLite | consensus disorder prediction | 337 | 372 | - | - | |
Bda07g01667 | 372 | SUPERFAMILY | beta-beta-alpha zinc fingers | 160 | 193 | IPR036236 | - | |
Bda07g01667 | 372 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 108 | 130 | IPR013087 | - | |
Bda07g01667 | 372 | Gene3D | Classic Zinc Finger | 103 | 133 | - | - | |
Bda07g01667 | 372 | Gene3D | Classic Zinc Finger | 163 | 195 | - | - | |
Bda07g01667 | 372 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 77 | 106 | IPR013087 | - | |
Bda07g01667 | 372 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 229 | 259 | IPR013087 | - | |
Bda07g01667 | 372 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 166 | 195 | IPR013087 | - | |
Bda07g01667 | 372 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 106 | 135 | IPR013087 | - | |
Bda07g01667 | 372 | MobiDBLite | consensus disorder prediction | 207 | 227 | - | - | |
Bda07g01667 | 372 | MobiDBLite | consensus disorder prediction | 257 | 372 | - | - | |
Bda07g01667 | 372 | MobiDBLite | consensus disorder prediction | 288 | 318 | - | - | |
Bda07g01667 | 372 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 231 | 254 | IPR013087 | - | |
Bda07g01667 | 372 | SUPERFAMILY | beta-beta-alpha zinc fingers | 117 | 170 | IPR036236 | - | |
Bda07g01667 | 372 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 136 | 165 | IPR013087 | - | |
Bda07g01667 | 372 | SMART | c2h2final6 | 136 | 160 | IPR013087 | - | |
Bda07g01667 | 372 | SMART | c2h2final6 | 166 | 190 | IPR013087 | - | |
Bda07g01667 | 372 | SMART | c2h2final6 | 229 | 254 | IPR013087 | - | |
Bda07g01667 | 372 | SMART | c2h2final6 | 77 | 101 | IPR013087 | - | |
Bda07g01667 | 372 | SMART | c2h2final6 | 106 | 130 | IPR013087 | - | |
Bda07g01667 | 372 | SUPERFAMILY | beta-beta-alpha zinc fingers | 80 | 130 | IPR036236 | - | |
Bda07g01667 | 372 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 79 | 101 | IPR013087 | - | |
Bda07g01667 | 372 | PANTHER | TRANSCRIPTIONAL REPRESSOR PROTEIN YY | 3 | 371 | - | - | |
Bda07g01667 | 372 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 138 | 160 | IPR013087 | - | |
Bda07g01667 | 372 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 168 | 191 | IPR013087 | - | |
Bda07g01667 | 372 | Gene3D | Classic Zinc Finger | 77 | 102 | - | - | |
Bda07g01667 | 372 | Gene3D | Classic Zinc Finger | 134 | 161 | - | - | |
Bda07g01667 | 372 | SUPERFAMILY | beta-beta-alpha zinc fingers | 224 | 252 | IPR036236 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01667 | Bda-Chr7:30947663 | Bda07g01679 | Bda-Chr7:31147999 | 0 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16198 | PF00096 | zf-C2H2 | 0.0029 | CL0361 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01667 | - | - | qsu:111997563 | 566.614 |