Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01675 ATGAGTACGGAGAACTTTCCGGCCATTCTTAGCCATGGCGGAAGGTTCATTCAGTACAATATTTTTGGTAATATCTTTGAAGTTACCGCTAAGTACAAGCCTCCAATCTTGCCCATCGGCAAAGGCGCTTATGGCATCGTCTGCTCGTCTTTAAACTCGGAGACGAATGAGAATGTGGCGATCAAAAAGATTGGAAATGCGTTTGACAACAAGATCGATGCGAAGAGAACTCTACGTGAGATCAAGCTGCTACGTCATATGGATCATGAAAACGTTGTTGCAATTAGGGATATTATACCTCCTCCACAGAGGGACGCATTTAATGATGTTTACATAGCGTACGAGCTAATGGACACTGACTTGCATCAAATTATTCGTTCTAATCAAGGATTATCAGAAGAACACTGCCAGGTTCTATCTCAGACATGTTTTTCGAATTGTTTCTGTCAATTTATGATGCTTGCTTGCCTTTCTATATCTCTGCTGGGACATTTTCTTGTTGCCCTTACAGTATCTCTGATAGGTACACCATCTGAGGCTGAGCTGGGATTTTTAAATGAAAATGCTAAGAGATACATTCGGCAACTTCCTCTGTATCCTAGACAATCACTCACTGAAAAGTTTCCCCATGTTCATCCTTCGGCCATTGATCTTGTTGAAAAGATGTTGACATTTGATCCAAGAGAAAGAATTACTGTCGAAGATGCACTGGACCATCCCTATTTAACTTCACTGCATGACGTGAGTGATGAGCCGGTTTGCATGACTCCCTTTAGCTTTGACTTTGAGCAACATGCACTGACTGAGGAACAGATGAAGGAACTTATCTACAGAGAGGCCCTTGCTTTTAACCACTAG 858 41.96 MSTENFPAILSHGGRFIQYNIFGNIFEVTAKYKPPILPIGKGAYGIVCSSLNSETNENVAIKKIGNAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRDAFNDVYIAYELMDTDLHQIIRSNQGLSEEHCQVLSQTCFSNCFCQFMMLACLSISLLGHFLVALTVSLIGTPSEAELGFLNENAKRYIRQLPLYPRQSLTEKFPHVHPSAIDLVEKMLTFDPRERITVEDALDHPYLTSLHDVSDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNH 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31090988 31093829 - Bda028562.1 Bda07g01675 10565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01675 285 Gene3D Phosphorylase Kinase; domain 1 257 280 - -
Bda07g01675 285 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 139 - -
Bda07g01675 285 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 168 284 - -
Bda07g01675 285 SUPERFAMILY Protein kinase-like (PK-like) 38 140 IPR011009 -
Bda07g01675 285 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 139 - -
Bda07g01675 285 ProSitePatterns Protein kinases ATP-binding region signature. 39 63 IPR017441 GO:0005524
Bda07g01675 285 ProSiteProfiles Protein kinase domain profile. 33 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01675 285 SMART serkin_6 33 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01675 285 Pfam Protein kinase domain 39 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01675 285 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 168 284 - -
Bda07g01675 285 SUPERFAMILY Protein kinase-like (PK-like) 176 283 IPR011009 -
Bda07g01675 285 Gene3D Phosphorylase Kinase; domain 1 9 137 - -
Bda07g01675 285 Gene3D Transferase(Phosphotransferase) domain 1 171 256 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01675 Bda-Chr7:31090988 Bda07g00616 Bda-Chr7:7528787 3.68E-51 dispersed
Bda03g01263 Bda-Chr3:18821956 Bda07g01675 Bda-Chr7:31090988 3.40E-20 transposed
Bda10g00939 Bda-Chr10:43740442 Bda07g01675 Bda-Chr7:31090988 1.46E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69738 PF00069 Pkinase 6.40E-16 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01675 K14512 - sly:543879 263.077