Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01729 ATGGCTGGCCTTGAAGAACTAAGGAAGAAGCTTGCACCATTATTTGATGCTGAAAAGGGTCTTTCTTTGGATTCATCGTTGGACCCTTCCGCTTCCTACACATTTTCAGATGGTGGAGCTGTTAACTTGTTGAGCAGATCATATGGAGTATACAATATTAACGAGTTTGGATTGCAAAAGTGCTCTTCTTGGCCTGCAGATGATACTGATCATAGTGAAAAGACATACCGATGTGCTTCGCATGAGATGAGAATATTTGGAGTAATCGGTAGTGGTGCTAGTAGTGTTGTGCAGAGAGCTATCCATATTCCCAGTCATAGAATTCTGGCTCTGAAAAAGATCAATATTTTTGAAAAGGATAAAAGGCAACAGCTTCTTACAGAGATAAGGACACTATGTGAAGCGCCATGTTACCAGGGTCTTGTAGAATTCCATGGAGCGTTTTATACTCCTGACTCTGGACAAATCAGTATAGCTTTGGAGTACATGGATGGAGGCTCGTTGGCAGACATATTACGTATGAAAAGGAAAATACCAGAGCCTGTCCTTTCTTCAATGTTCCAAAAGATTCTCCAGGGACTGAGTTACTTGCATGGAGTTAGATATTTAGTCCACAGAGATATAAAGCCAGCTAATCTGCTTATAAATCTCAAGGGTGAGCCAAAAATAACAGATTTCGGTGTAAGTGCGGGGTTAGAGAATTCAATGGCGATGTGCGCGACATTTGTTGGGACCGTTACATACATGTCACCTGAACGGATTCAAAATCAAAATTACTCCTATCCTGCTGACATCTGGAGCCTTGGACTTGCTCTCTTTGAGTGTGGTACTGGAGAATTCCCATATATTGCAACTGAAGGTCCAGTAAATCTGATGTTGCAGATTTTGGATGATCCGTCACCATCGCCACCAAACCACAGCTTTTCACCGGAGTTTTGCTCGTTTGTTGATTCTTGTTTGCAAAAGGATGCAGACGCTAGACCCACTGCCGAACAGTTGCTTGCACATCCATTTATCACAAAGTACGAGGATGCTCAAGTAGACTTGGCAGATTTTGTAAGAAGTGTGTTTGACCCGACACAGAGGTTGAAGGACTTGGCAGATATGCTGGCAATTCATTATTACTTGCTCATTGATGGACCTGATGACGTTTGGCATCACGCGCGAACCTTGTACGATGAACGATCAAATTTCAGTTTCGCGGAGAAGCTCTACGTAGGCCCAAATGACATTTTTGAAACTCTGTCAAATATTCGAAGCACATTAGCGGGTGATTGGCCTCCTGAAAAGCTAGTGCATGTGGTTGAAAAGCTCCAGTGTCGAGCTCACGGAGCGGATGGAGTTGCTATTCGAGTATCAGGATCCTTTATCATCGGGAACCAGTTTCTAGTGTGTGGAGATGGAGTTCAAGTGGAGGGCTTACCCCATTTTAAAGATCTTGCTATCGATCTCGGCTCTCGCAGAATGGGGATGTTCCGCGAGCAGTTTATTATGGAGCCGAGCAGTGTGATTGGTCGATACGTTATTTCGAAACAAGAGCTGTATGTAACCCATCAGTAA 1560 43.59 MAGLEELRKKLAPLFDAEKGLSLDSSLDPSASYTFSDGGAVNLLSRSYGVYNINEFGLQKCSSWPADDTDHSEKTYRCASHEMRIFGVIGSGASSVVQRAIHIPSHRILALKKINIFEKDKRQQLLTEIRTLCEAPCYQGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMKRKIPEPVLSSMFQKILQGLSYLHGVRYLVHRDIKPANLLINLKGEPKITDFGVSAGLENSMAMCATFVGTVTYMSPERIQNQNYSYPADIWSLGLALFECGTGEFPYIATEGPVNLMLQILDDPSPSPPNHSFSPEFCSFVDSCLQKDADARPTAEQLLAHPFITKYEDAQVDLADFVRSVFDPTQRLKDLADMLAIHYYLLIDGPDDVWHHARTLYDERSNFSFAEKLYVGPNDIFETLSNIRSTLAGDWPPEKLVHVVEKLQCRAHGADGVAIRVSGSFIIGNQFLVCGDGVQVEGLPHFKDLAIDLGSRRMGMFREQFIMEPSSVIGRYVISKQELYVTHQ 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32401743 32406474 - Bda028635.1 Bda07g01729 10619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01729 519 Pfam Protein kinase domain 86 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01729 519 CDD PKc_MAPKK_plant_like 84 343 - -
Bda07g01729 519 SUPERFAMILY Protein kinase-like (PK-like) 85 358 IPR011009 -
Bda07g01729 519 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 516 IPR018222 -
Bda07g01729 519 SMART serkin_6 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01729 519 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 517 - -
Bda07g01729 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Bda07g01729 519 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Bda07g01729 519 PANTHER - 2 517 - -
Bda07g01729 519 Gene3D - 364 517 - -
Bda07g01729 519 Gene3D Transferase(Phosphotransferase) domain 1 165 363 - -
Bda07g01729 519 Gene3D Phosphorylase Kinase; domain 1 59 164 - -
Bda07g01729 519 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01729 519 SUPERFAMILY NTF2-like 364 514 IPR032710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00383 Bda-Chr2:44203814 Bda07g01729 Bda-Chr7:32401743 1.37E-68 dispersed
Bda07g01729 Bda-Chr7:32401743 Bda11g01036 Bda-Chr11:10100335 6.07E-72 dispersed
Bda07g01729 Bda-Chr7:32401743 Bda01g02038 Bda-Chr1:56647120 1.06E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69742 PF00069 Pkinase 1.10E-59 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01729 K20607 - csin:114272195 885.945