Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01729 | ATGGCTGGCCTTGAAGAACTAAGGAAGAAGCTTGCACCATTATTTGATGCTGAAAAGGGTCTTTCTTTGGATTCATCGTTGGACCCTTCCGCTTCCTACACATTTTCAGATGGTGGAGCTGTTAACTTGTTGAGCAGATCATATGGAGTATACAATATTAACGAGTTTGGATTGCAAAAGTGCTCTTCTTGGCCTGCAGATGATACTGATCATAGTGAAAAGACATACCGATGTGCTTCGCATGAGATGAGAATATTTGGAGTAATCGGTAGTGGTGCTAGTAGTGTTGTGCAGAGAGCTATCCATATTCCCAGTCATAGAATTCTGGCTCTGAAAAAGATCAATATTTTTGAAAAGGATAAAAGGCAACAGCTTCTTACAGAGATAAGGACACTATGTGAAGCGCCATGTTACCAGGGTCTTGTAGAATTCCATGGAGCGTTTTATACTCCTGACTCTGGACAAATCAGTATAGCTTTGGAGTACATGGATGGAGGCTCGTTGGCAGACATATTACGTATGAAAAGGAAAATACCAGAGCCTGTCCTTTCTTCAATGTTCCAAAAGATTCTCCAGGGACTGAGTTACTTGCATGGAGTTAGATATTTAGTCCACAGAGATATAAAGCCAGCTAATCTGCTTATAAATCTCAAGGGTGAGCCAAAAATAACAGATTTCGGTGTAAGTGCGGGGTTAGAGAATTCAATGGCGATGTGCGCGACATTTGTTGGGACCGTTACATACATGTCACCTGAACGGATTCAAAATCAAAATTACTCCTATCCTGCTGACATCTGGAGCCTTGGACTTGCTCTCTTTGAGTGTGGTACTGGAGAATTCCCATATATTGCAACTGAAGGTCCAGTAAATCTGATGTTGCAGATTTTGGATGATCCGTCACCATCGCCACCAAACCACAGCTTTTCACCGGAGTTTTGCTCGTTTGTTGATTCTTGTTTGCAAAAGGATGCAGACGCTAGACCCACTGCCGAACAGTTGCTTGCACATCCATTTATCACAAAGTACGAGGATGCTCAAGTAGACTTGGCAGATTTTGTAAGAAGTGTGTTTGACCCGACACAGAGGTTGAAGGACTTGGCAGATATGCTGGCAATTCATTATTACTTGCTCATTGATGGACCTGATGACGTTTGGCATCACGCGCGAACCTTGTACGATGAACGATCAAATTTCAGTTTCGCGGAGAAGCTCTACGTAGGCCCAAATGACATTTTTGAAACTCTGTCAAATATTCGAAGCACATTAGCGGGTGATTGGCCTCCTGAAAAGCTAGTGCATGTGGTTGAAAAGCTCCAGTGTCGAGCTCACGGAGCGGATGGAGTTGCTATTCGAGTATCAGGATCCTTTATCATCGGGAACCAGTTTCTAGTGTGTGGAGATGGAGTTCAAGTGGAGGGCTTACCCCATTTTAAAGATCTTGCTATCGATCTCGGCTCTCGCAGAATGGGGATGTTCCGCGAGCAGTTTATTATGGAGCCGAGCAGTGTGATTGGTCGATACGTTATTTCGAAACAAGAGCTGTATGTAACCCATCAGTAA | 1560 | 43.59 | MAGLEELRKKLAPLFDAEKGLSLDSSLDPSASYTFSDGGAVNLLSRSYGVYNINEFGLQKCSSWPADDTDHSEKTYRCASHEMRIFGVIGSGASSVVQRAIHIPSHRILALKKINIFEKDKRQQLLTEIRTLCEAPCYQGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMKRKIPEPVLSSMFQKILQGLSYLHGVRYLVHRDIKPANLLINLKGEPKITDFGVSAGLENSMAMCATFVGTVTYMSPERIQNQNYSYPADIWSLGLALFECGTGEFPYIATEGPVNLMLQILDDPSPSPPNHSFSPEFCSFVDSCLQKDADARPTAEQLLAHPFITKYEDAQVDLADFVRSVFDPTQRLKDLADMLAIHYYLLIDGPDDVWHHARTLYDERSNFSFAEKLYVGPNDIFETLSNIRSTLAGDWPPEKLVHVVEKLQCRAHGADGVAIRVSGSFIIGNQFLVCGDGVQVEGLPHFKDLAIDLGSRRMGMFREQFIMEPSSVIGRYVISKQELYVTHQ | 519 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 32401743 | 32406474 | - | Bda028635.1 | Bda07g01729 | 10619 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01729 | 519 | Pfam | Protein kinase domain | 86 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda07g01729 | 519 | CDD | PKc_MAPKK_plant_like | 84 | 343 | - | - | |
Bda07g01729 | 519 | SUPERFAMILY | Protein kinase-like (PK-like) | 85 | 358 | IPR011009 | - | |
Bda07g01729 | 519 | ProSiteProfiles | Nuclear transport factor 2 domain profile. | 366 | 516 | IPR018222 | - | |
Bda07g01729 | 519 | SMART | serkin_6 | 83 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda07g01729 | 519 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 2 | 517 | - | - | |
Bda07g01729 | 519 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 203 | 215 | IPR008271 | GO:0004672|GO:0006468 | |
Bda07g01729 | 519 | ProSitePatterns | Protein kinases ATP-binding region signature. | 89 | 112 | IPR017441 | GO:0005524 | |
Bda07g01729 | 519 | PANTHER | - | 2 | 517 | - | - | |
Bda07g01729 | 519 | Gene3D | - | 364 | 517 | - | - | |
Bda07g01729 | 519 | Gene3D | Transferase(Phosphotransferase) domain 1 | 165 | 363 | - | - | |
Bda07g01729 | 519 | Gene3D | Phosphorylase Kinase; domain 1 | 59 | 164 | - | - | |
Bda07g01729 | 519 | ProSiteProfiles | Protein kinase domain profile. | 83 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda07g01729 | 519 | SUPERFAMILY | NTF2-like | 364 | 514 | IPR032710 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00383 | Bda-Chr2:44203814 | Bda07g01729 | Bda-Chr7:32401743 | 1.37E-68 | dispersed | |
Bda07g01729 | Bda-Chr7:32401743 | Bda11g01036 | Bda-Chr11:10100335 | 6.07E-72 | dispersed | |
Bda07g01729 | Bda-Chr7:32401743 | Bda01g02038 | Bda-Chr1:56647120 | 1.06E-70 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69742 | PF00069 | Pkinase | 1.10E-59 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01729 | K20607 | - | csin:114272195 | 885.945 |