Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01752 ATGCGCCGCTACTCCGGCCTCGCCAGCCTTCTAGCTCCGAAGGGTCCCAGCTCACCGGCCCGACCAGCCACCCTCGCTTTTCTTCTCGGTCGAGCCACAGGTCACCGCGGTCCCTCCATGTTGGTCCGTGAGACAGCGGCTAGGCAGCTCGAGGAACGGCGAGCCGACTGGGGCTATTCCAAGCCGGTGGTGGTGCTGGACATATTGTGGAACACGGCGTTTGTTGTTGTGACGGTGGCTATGTTGATTTTCACTATCCACGAGCGCGCTTGCACGCCTATTCGGCTATGGATCTGTGGCTACGCTTTGCAGTGCGTGGTTCATGTGGTGCTTGTGTGGTTAGAGTACAGAAGGAGGACCGTTAGGCGAGTTAGGGATTTGGAGCGGGAGCAGCAGAGCGCAGATACTGCGAATGAAAGCGAGGATGAGGATTCTGGAGAGAGGGGTTTGGCTAGTTTGAACCAGTCTAATGTCAACAAACGATGTGAATCAGTAAATACGATGGCATCGTTTCTCTGGTGGATAGTTGGCTTCTATTGGGTTGTCTCTGGCAGTGATAATCTTCTGCGAAATGCTCCGCAGTTGTACTGGTTGGCTGTGGTCTTCCTGGCATTTGATGTGTTTTTTGCCGTCTTTTGTGTTGTTTTGGCATGTTTGATTGGGATTGCTCTTTGCTGCTGCTTGCCTTGCATCATTGCCATACTCTATGCTGTTGCAGGGCAGGAAGGTGCATCAGAAGCAGATCTTAGTATCCTTCCAAAATACAGATTTCAAGCTTTCAATGAAGAAGAGAAGACCAATGTGGGGGCTGGTTTAATGGTTCCTGTGGAAACCAGCAGTGGATACTTAGCGACTGAGAAAACACTTTTACCTGAGGATGCAGAGTGTTGTATATGTTTGAGTTCATACGAGGATGGAGCAGAGCTGAATGCTCTTCCCTGCAGCCACCATTTCCACTCTGCATGCATCATAAAATGGCTGAGAATGAATGCAACATGTCCTCTCTGCAAATACAACATTCTCAAAGGCTGTGAACAGGTATAA 1044 50.29 MRRYSGLASLLAPKGPSSPARPATLAFLLGRATGHRGPSMLVRETAARQLEERRADWGYSKPVVVLDILWNTAFVVVTVAMLIFTIHERACTPIRLWICGYALQCVVHVVLVWLEYRRRTVRRVRDLEREQQSADTANESEDEDSGERGLASLNQSNVNKRCESVNTMASFLWWIVGFYWVVSGSDNLLRNAPQLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQAFNEEEKTNVGAGLMVPVETSSGYLATEKTLLPEDAECCICLSSYEDGAELNALPCSHHFHSACIIKWLRMNATCPLCKYNILKGCEQV 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32975913 32979199 - Bda028672.1 Bda07g01752 10642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01752 347 Pfam Ring finger domain 295 337 IPR001841 -
Bda07g01752 347 SMART ring_2 296 336 IPR001841 -
Bda07g01752 347 ProSiteProfiles Zinc finger RING-type profile. 296 337 IPR001841 -
Bda07g01752 347 SUPERFAMILY RING/U-box 284 341 - -
Bda07g01752 347 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE 9 344 - -
Bda07g01752 347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 343 IPR013083 -
Bda07g01752 347 PANTHER TARGET OF ERK KINASE MPK-1 9 344 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01752 Bda-Chr7:32975913 Bda10g01198 Bda-Chr10:45980959 0 dispersed
Bda07g01752 Bda-Chr7:32975913 Bda08g00529 Bda-Chr8:5286865 7.65E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01752 - K13148 tcc:18609876 502.286