Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01759 ATGAGCCTGTTAGGAAAACTAGAGACTGATGTAGAAATAAATGCTTCTGCAGAGAAGTTTCATGAGATGTTCAGGAGCAAACCACACCATATCACACATGCAACCTCTCATAATATTCAAGGATGTGAGCTGCTTGAAGGTGATTGGGGCACCGTCGGATCGATTGTCTGCTGGAATTTCGTTCATGATGGAAAGTCTTATGTGGCGAAGGACCTGATAGAGGCAATAGATGAGGAAAACAATTCTGTGACATTCAAAGTGATAGAAGGACATCTTCTGGATGAGTACAAGTCCTTCAAATTCACAGTTCAAGTCGCTCCAAAGGGAGAAGGAAGCGTTGTGCATTGGACTTTAGAATACGAAAAATTGCATGAGCACATCTCGGATTGTCATAGTCTGCTTCAGTTTTGTGTCGATGTGTCAAAGGACCTGGACGAGCACCTGATCGCTCAGGCCTGA 459 43.79 MSLLGKLETDVEINASAEKFHEMFRSKPHHITHATSHNIQGCELLEGDWGTVGSIVCWNFVHDGKSYVAKDLIEAIDEENNSVTFKVIEGHLLDEYKSFKFTVQVAPKGEGSVVHWTLEYEKLHEHISDCHSLLQFCVDVSKDLDEHLIAQA 152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33128505 33129198 + Bda028683.1 Bda07g01759 10649

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01759 152 PANTHER MLP-LIKE PROTEIN 34-RELATED 1 149 - -
Bda07g01759 152 SUPERFAMILY Bet v1-like 1 149 - -
Bda07g01759 152 CDD Bet_v1-like 5 148 - -
Bda07g01759 152 Gene3D - 1 151 IPR023393 -
Bda07g01759 152 Pfam Pathogenesis-related protein Bet v 1 family 3 150 IPR000916 GO:0006952
Bda07g01759 152 PANTHER MLP-LIKE PROTEIN 423 1 149 - -
Bda07g01759 152 SMART Bet_v_1_2 2 151 IPR000916 GO:0006952
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01759 - - - cmos:111448885 226.868
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01756 Bda-Chr7:33024668 Bda07g01759 Bda-Chr7:33128505 1.38E-90 dispersed
Bda07g01757 Bda-Chr7:33083810 Bda07g01759 Bda-Chr7:33128505 3.78E-93 dispersed
Bda07g01759 Bda-Chr7:33128505 Bda14g01640 Bda-Chr14:42415741 5.99E-82 dispersed
Bda07g01758 Bda-Chr7:33116393 Bda07g01759 Bda-Chr7:33128505 3.98E-110 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g441 . . . . . . Bma14g01952 . . . . . . . . . . Bhi07g00313 . . . . . . . . . . . . . Cone13ag0755 Cone19ag0759 . . . . . . Blo06g01018 . Bda07g01759 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000126 7 11 4 7 2 7 0 7 4 5 8 6 16 3 3 16 6 2 0 15 6 6 11 14 6 8 10 7 13 6 216