Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01760 ATGGAAAAATCGAGGCAACGGTTCTCAAATCAAGACCCCTCTTTGTCACCCACTGCTGTTAGAACAAGGGAATGGGAGGATCCGTTGAGATGGACTGATTACTTGGGGCCAGATATGACTTCACCAATGACATCTCGAAGCTCAAGAAATTCGGTTTCTGAAGCACATGCGCCTAATTCAACTGGGTCACACAAGGGTTTCAGTATGCAGTGGATTAGCCAACTCATTGAAGTTGCAGATGGACTTATGGCTAAAATGTATAGACTGAACCAAATTTTAGACTATCCAGATTCTGTGGGAAATCTGTTCTCTGATTCCTTTTGGAAAGCAGGTGTTTTCCCCAATCATCCTAGAATTTGCTTGCTGCTCTCGAAGAAATTTCCTGAGCACCATAGCAAATTACAACTTGAACGTGTTGATAAGGTTGCCTTGGACGCAATCAATGATGGGGCAGAAATTCATTTACAGAGCTTGGAACCTTGGGTCCAGCTGCTTATTGATTTGATGGCTTTTAGAGAACAGGCTTTGAGGCTTATTCTGGATCTAAGTAGTACAGTTATCACATTGTTGCCCCATCAGAACTCGGTCATACTGCACGCTTTTATGGATCTGTTTTGCTCCTTCATTCGAATTCCAAGGAAAATGATGATTCAGGTTTATAATCTTTTGCATGCCATGACAAGAAATGACCACGACTGTGATCTATATCATCGGCTGGTTCTATTCATAGACTCCTATGACCCCCCACTAAAAGGGCTACAAGAGGATCTTAATTTTGTTAGTCCACGCATTGGAGAGGTATTAGAGGCTGTAGGACCTATTATCTTCCTGTCCACAGATACAAGGAAGCTCAGAAATGAGGGGTTTTTAAGTCCATATCATCCACGTTATCCAGACATACTGACAAACACTGCTCATCCAATGAGGGCACAAGATCTTGCAAATGTCACTTCATATCGTGACTGGGTATTATTTGGATACCTTGTCTGTCCTGATGAGCTACTACGTGTGACCAGTATTGATATTGCAATGGTTGTGCTGAGGGAAAATTTAGTCCTAACATTATTTAGGGAGGAGTGTCTATATTTGCACGAAGATTATCAATTATATGTTTTGCCGAGAATACTGGAATCAAAGAAGATGGCGAAATCAGGGCGGACAAAGCAGAAAGAAGCAGATCTTGAGTATAATGTTGCAAAGCAGGTTGAGAAAATGATTAGCGAGGTACATGAACAAGCATTTGTATCATGTGATGGCATACATCACGAGAGGAGAATATTGTTAAAGCAAGAGATTGGAAGAATGGTGCTGTTTTTCACTGATCAACCTAGTTTATTGGCTCCAAACATTCAGATGGTGTTTTCTGCCTTGGCTTTAGCTCAATCTGAGGTGACATGGTATTTTCAACATGTGGGAATTGCATCCTCAAAATCTAGGGCTTCCAGAATAATACCAGTAGAAATAGATGCAAGTGATCCAACAATTGGGTTCTTGTTAAATGGCATAGACCAGCTATGCTGCTTAGTGCGGAAATATATTTCTGCAATACGAGGCTATGCATTGTCATATCTTTCTTCCTGTGCTAGCAGAATCCGATTTTTGTTGGGTACTCCAGGAATGGTGGCTCTTGATTTAGATACAGGACTGAAAGGACTTTTTCAGCAAATAGTCCACCATCTTGAAAACATACCAAAACCGCAGGGTGAAAATATTTCTGCAATCACATGTGACCTCTCTGTTTTTCGAAAAGACTGGTTGTCAATATTGATGATTGTGACATCTTCTCGATCATCTATAAACATAAGACATTTGGAGAAAGCTACAGTCTCTACTGGGAAAGAAGGCTTATTATCAGAGGGAAATGCTGCGTATAGTTGGTCCAGATGTGTTGATCAATTGGAGTTGCAATTATCTAAACATGGGAGTTTAAAGAAGCTGTATTTTTACCATCAGCACCTTACAGCAGTATTCAGAAATACTATGTTTAGCCCAGAAGGACGTCCTCAGCATTGCTGTGCATGGCTGGGGGTTGCTAGTAGTTTTCCTGAGTGTGCTTCTCCCGTCGTGCCAGAGGAGGTGTCTAAAATTGGAAGAGATGCTGTACTTTATGTTGAATCTCTTATTGAGTCAATTATGGGAGGATTGGAGGGATTAATAAATATTCTTGATTCTGAAGGAGGATTTGGAGCCCTAGAGACTCAGCTTCTTCCAGAGCAGGCGGCATCTTACTTGAATTATGCCTCTAGAGTTTCAATTCCTTCAATAAAATCTCCAAAAGGAGTTGCTGGTTTTTCTTTGCCTGGCCATGAGAGCTATCCTGAAAATAATGCTTCCGTCAAAATGCTAGAAGCGGCTATGCAAAGGTTGACCAATTTATGTTCAGTGTTAAATGATATGGAGCCTATATGTGTTTTGAACCATGTCTTTGTGTTAAGGGAGTACATGAGAGAATGCATTCTTGGGAACTTTCAAAGGAGATTGCTTGCAGTTCTAAAAATGGACAGTGATATCCAGCGACCTTCTGTACTGGAGTCACTGATTCGCAGACATACCAGCATTGTCCATCTTGCTGAGCAGCATGTTAGCATGGATCTCAGTCAGGGTATCAGAGAAGTTATGCTCGCAGAGAGTTTCTCAGGACCAGTTTCATCTCTTCACTTATTTGACAAGCCAGAAGAGCAACAAACTGGTTCAGCTGCTGAAGCTGTCTGCAACTGGTACATAAACAATATAATCAAAGATGCATCTGGTGCTGGAGTTCTATTTGCCCCATTCCACAAGTGCTTCAAGAGCGCAAGGCCTGTTGGTGGCTATTTTGCTGACTCTTTCACTGATAACAGAGAATTTCAGGCATTTGCTCGAATTTTTGGTGGCTATGGAGTAGACAAGTTGGGGCGGCTAATGAAAGAACACACCGCTGCACTTTTAAATTGCATTGACACATCTTTACGATCTAACCGTGAGGCATTGGAAGCTTTTGCTAGTGGGATTCATTCCGGTGATCGAATCGAAAGAGATGCATCTTTGAAACAGATTATTGATATAGATACAGTTATGGGATTTTGTGTTGAGGCTGGATTAGCATTAGCTTTTGACCAGAGTTTAGCTGAAGCAGCTGGAACTGTTCTCGAGGAAGGTGCCCCTTTAATCTATTCATTATTAGCTGCAGTGGTTAAGTACATACCTGATGAAGTACCTGAAAAGAAGGACATCAAGAGAATGAGAGAAGTGGTTAACATGGTTGGCGTGGTCAGTGATAATGATTCCCAGAGGGTGAGATCTATCTTGGAAGATGTTTATAGCGCAAATGATGGCTCATGGAGCTTATTACCATATTTATTTGCCACCTTCATGACCTCAAGCATTTGGAACTCCACTTCCTTTAATGTGGAGACGGGTGGCTTCAATAACAACATCCACTGCTTAGCAAGGTGCATTAGTGCTGTCGTCGCAGGAAGTGAATATGTAAAATTAGAACGTGAACACAAGCAGAGACAATCATTGTCAAATGGCCATGCCGGTGAAACATTGGATCCTGAAATTTCCATTCAGTTTTCAGCGGAAGCAAGCATAAAGTCAACAATGCAACTTTTTGTGAAATTCGCTGCTGGTATTGTACTAGATTCTTGGACTGAAAATAACAGCAGATCTTATCTGGTTCCGCAGCTTATTTTTCTGGATCAACTTTGTGAGATCTCTCCCTATCTTCCCAGAAGCACTTTGGAAACACACGTTCCTTATACAATTATACGATCTATTTACAGTCAGTTGTACGGAAATTCTCCCACTATGCCATTTGCATTCGTCGGTGCATCTCCCCACCATTCGCCTGCAATATCACTAGCACACGCATCTCCAGTTTTGCGACAGTCTCGTGGCAATCTAACTCCCCAGCACAGTTCCACTGGTTCGAGCATTTTAAAAGGATCATCCGATCATGATTCTGCGAGTTCACAGAGTTTGGAGAATAAGCATCAGAAATTTGGTCGTTCTGGGCCCTTAGATTACAGTTTGAGCCGGAAAGGGAAAAACAACGAAGGCTCAACATCTGGTAACACGAGTCGCAGTCCGTTACCGAGATTTGCGGTCTCAAGGTCTGGTCCCATCGCATACAAGTAG 4119 41.95 MEKSRQRFSNQDPSLSPTAVRTREWEDPLRWTDYLGPDMTSPMTSRSSRNSVSEAHAPNSTGSHKGFSMQWISQLIEVADGLMAKMYRLNQILDYPDSVGNLFSDSFWKAGVFPNHPRICLLLSKKFPEHHSKLQLERVDKVALDAINDGAEIHLQSLEPWVQLLIDLMAFREQALRLILDLSSTVITLLPHQNSVILHAFMDLFCSFIRIPRKMMIQVYNLLHAMTRNDHDCDLYHRLVLFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNTAHPMRAQDLANVTSYRDWVLFGYLVCPDELLRVTSIDIAMVVLRENLVLTLFREECLYLHEDYQLYVLPRILESKKMAKSGRTKQKEADLEYNVAKQVEKMISEVHEQAFVSCDGIHHERRILLKQEIGRMVLFFTDQPSLLAPNIQMVFSALALAQSEVTWYFQHVGIASSKSRASRIIPVEIDASDPTIGFLLNGIDQLCCLVRKYISAIRGYALSYLSSCASRIRFLLGTPGMVALDLDTGLKGLFQQIVHHLENIPKPQGENISAITCDLSVFRKDWLSILMIVTSSRSSINIRHLEKATVSTGKEGLLSEGNAAYSWSRCVDQLELQLSKHGSLKKLYFYHQHLTAVFRNTMFSPEGRPQHCCAWLGVASSFPECASPVVPEEVSKIGRDAVLYVESLIESIMGGLEGLINILDSEGGFGALETQLLPEQAASYLNYASRVSIPSIKSPKGVAGFSLPGHESYPENNASVKMLEAAMQRLTNLCSVLNDMEPICVLNHVFVLREYMRECILGNFQRRLLAVLKMDSDIQRPSVLESLIRRHTSIVHLAEQHVSMDLSQGIREVMLAESFSGPVSSLHLFDKPEEQQTGSAAEAVCNWYINNIIKDASGAGVLFAPFHKCFKSARPVGGYFADSFTDNREFQAFARIFGGYGVDKLGRLMKEHTAALLNCIDTSLRSNREALEAFASGIHSGDRIERDASLKQIIDIDTVMGFCVEAGLALAFDQSLAEAAGTVLEEGAPLIYSLLAAVVKYIPDEVPEKKDIKRMREVVNMVGVVSDNDSQRVRSILEDVYSANDGSWSLLPYLFATFMTSSIWNSTSFNVETGGFNNNIHCLARCISAVVAGSEYVKLEREHKQRQSLSNGHAGETLDPEISIQFSAEASIKSTMQLFVKFAAGIVLDSWTENNSRSYLVPQLIFLDQLCEISPYLPRSTLETHVPYTIIRSIYSQLYGNSPTMPFAFVGASPHHSPAISLAHASPVLRQSRGNLTPQHSSTGSSILKGSSDHDSASSQSLENKHQKFGRSGPLDYSLSRKGKNNEGSTSGNTSRSPLPRFAVSRSGPIAYK 1372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33189948 33222447 + Bda028685.1 Bda07g01760 10650

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01760 1372 MobiDBLite consensus disorder prediction 38 64 - -
Bda07g01760 1372 PANTHER MEMBRANE-ASSOCIATED PROTEIN HEM 62 1264 - -
Bda07g01760 1372 MobiDBLite consensus disorder prediction 1291 1372 - -
Bda07g01760 1372 MobiDBLite consensus disorder prediction 36 64 - -
Bda07g01760 1372 Pfam Nck-associated protein 1 75 1259 IPR019137 -
Bda07g01760 1372 MobiDBLite consensus disorder prediction 1 22 - -
Bda07g01760 1372 PANTHER NCK-ASSOCIATED PROTEIN 1 62 1264 IPR019137 -
Bda07g01760 1372 MobiDBLite consensus disorder prediction 1291 1326 - -
Bda07g01760 1372 MobiDBLite consensus disorder prediction 1341 1360 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01760 K05750 NCKAP1, NAP125; NCK-associated protein 1 - qsu:111986836 2256.1
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g391 . . . . . . Bma14g01960 . Cmo04g01545 Cmo18g00991 . Cma18g00983 Car04g01532 Car18g00905 Sed06g1922 Cpe09g00333 Cpe01g01315 Bhi07g01248 Tan04g0787 Cmetu10g0609 Lac13g0553 Hepe01g1146 . . Cla05g02260 Cam05g2429 Cec05g2446 Cco05g2492 Clacu05g2418 Cmu05g2285 Cre05g2403 Cone13ag0788 . . . Lsi04g00204 Csa05g02663 Chy10g01194 Cme10g00208 . . Bda07g01760 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009667 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33