Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01790 GGAGGGTCATGTGGGTATGGAAATGCAGTGTCAACACCTCCATTTTCTTCACTAGTTACAGGAGTAGGTCCATCTCTTTACAAATCAGGCACACAATGTGGAGTTTGCTATCAGGTTGTTAGGTGTACTAAAAATCGATGGTGTTCAACGAAGGCAACTAGGGTTGTGATAACGGATTTCTGCCCGGGAGGAATTTGTGCTTCTGGCCCTGCTCATTTCGACCTGAGCGGTACCGCATTCGGAGCAATGTCGCTTGCCGGAAGAGAAGACAATCTTCGTGATGCCGGAATAATAGAAGTAGAATATGCAAGAGTGGCATGCGATTACGGGGGGAAGACCATTGCCTTTAGGGTGGACGAGGGTGCAAACAGCCACTATTTTGCTACGTCGATTATGTTCCAAGAAGGTGATGGCGATCTGTCAGCCGTTGATTTGATGGACTCTTCCTCAGGTTATTGGAAGCCCATGATACAATCATGGGGTGCAGTGTGGAAAATAGATTCTCCTCCAGAACTTCTTCCACCTTTCTCAATTAGATTGACTTCGGGATATTCAGAGCAAACCCTAGTGGCAAAAAATGTAATTCCACTCGGATGGGTTCCTGGATTTACTTATAAATCCATGGTCAACTATCTATGA 639 45.7 GGSCGYGNAVSTPPFSSLVTGVGPSLYKSGTQCGVCYQVVRCTKNRWCSTKATRVVITDFCPGGICASGPAHFDLSGTAFGAMSLAGREDNLRDAGIIEVEYARVACDYGGKTIAFRVDEGANSHYFATSIMFQEGDGDLSAVDLMDSSSGYWKPMIQSWGAVWKIDSPPELLPPFSIRLTSGYSEQTLVAKNVIPLGWVPGFTYKSMVNYL 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33827970 33829097 + Bda028722.1 Bda07g01790 10680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01790 212 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 112 IPR007112 -
Bda07g01790 212 PANTHER EXPANSIN-B15-LIKE 1 211 - -
Bda07g01790 212 PANTHER EXPANSIN-B3 1 211 - -
Bda07g01790 212 Pfam Expansin C-terminal domain 114 196 IPR007117 -
Bda07g01790 212 PRINTS Expansin/Lol pI family signature 153 167 IPR007118 GO:0005576
Bda07g01790 212 PRINTS Expansin/Lol pI family signature 95 111 IPR007118 GO:0005576
Bda07g01790 212 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576
Bda07g01790 212 PRINTS Expansin/Lol pI family signature 23 41 IPR007118 GO:0005576
Bda07g01790 212 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 125 207 IPR007117 -
Bda07g01790 212 Gene3D - 1 108 IPR036908 -
Bda07g01790 212 PRINTS Major pollen allergen Lol pI signature 162 179 IPR005795 GO:0005576|GO:0019953
Bda07g01790 212 PRINTS Major pollen allergen Lol pI signature 42 52 IPR005795 GO:0005576|GO:0019953
Bda07g01790 212 PRINTS Major pollen allergen Lol pI signature 116 131 IPR005795 GO:0005576|GO:0019953
Bda07g01790 212 PRINTS Major pollen allergen Lol pI signature 132 147 IPR005795 GO:0005576|GO:0019953
Bda07g01790 212 SUPERFAMILY PHL pollen allergen 112 207 IPR036749 -
Bda07g01790 212 Pfam Lytic transglycolase 23 102 IPR009009 -
Bda07g01790 212 Gene3D - 109 212 IPR036749 -
Bda07g01790 212 SUPERFAMILY Barwin-like endoglucanases 1 111 IPR036908 -
Bda07g01790 212 SMART dpbb_1 19 102 IPR007112 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01790 Bda-Chr7:33827970 Bda11g00424 Bda-Chr11:4507453 8.82E-77 dispersed
Bda07g01790 Bda-Chr7:33827970 Bda11g00425 Bda-Chr11:4511861 6.91E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01790 - - tcc:18605317 315.849