Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01877 ATGGACAACTTTTCGAATTTTTATGAGATGTTCTCTTTTGGGTCGCCGGTTTGTTTGCCGGAAGTGTCAAGCTCCGAGAGCAGTACTTCTAAGGGGGCGAATTTTTCCGACGAGGAGGTAATGTTGGCGTCAAAGCATCCGAAGAAGAAGGCGGGGAGGAAGAAGTTTAAAGAGACGAGGCACTTGGTTTACAGAGGAGTGAGAAGAAGAAATTCCGGCAAGTGGGTGAGTGAGGTGAGAGAGCCCAACAAGAAGTCCAGGATTTGGTTGGGGACTTTTCAGACAGCCGAAATGGCGGCTCGGGCACATGATGTGGCGGCACTAGCCCTGAGAGGCCGGTCTGCTTGTCTGAATTTCGCCGACTCCGTTTGGCGGCTGCCCGTGCCGGATTCCGCCACCCCCAAGGACATTCAAAAGGCAGCAGCAGAAGCGGCAGAGATGTTCCGACAGGCGGAGTCCGATGTGTTGAGTTTGGACGATTCGACACCGGAAATGTCAAAAACTTGCAGCAAAACGTCAGCCATTGTTGACGAAACGACGGCGGAGACATCACCAAACTGGTGGGTTTTGGACGAGGATGAGGTTTTCAGTATGCCTGGACTGCTGATGAACATGGCGGAGGGAATGTTGTTGCCGCCGCCACAGTGTGCGGTAGATGCTGACGTGGGATTCGAGACTGACGTGGCATTATGGAGTTATTCATTTTAA 708 52.26 MDNFSNFYEMFSFGSPVCLPEVSSSESSTSKGANFSDEEVMLASKHPKKKAGRKKFKETRHLVYRGVRRRNSGKWVSEVREPNKKSRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSVWRLPVPDSATPKDIQKAAAEAAEMFRQAESDVLSLDDSTPEMSKTCSKTSAIVDETTAETSPNWWVLDEDEVFSMPGLLMNMAEGMLLPPPQCAVDADVGFETDVALWSYSF 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 36182782 36183489 - Bda028849.1 Bda07g01877 10767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01877 235 MobiDBLite consensus disorder prediction 24 55 - -
Bda07g01877 235 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 23 234 IPR045277 GO:0003700
Bda07g01877 235 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Bda07g01877 235 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Bda07g01877 235 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
Bda07g01877 235 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Bda07g01877 235 SUPERFAMILY DNA-binding domain 63 122 IPR016177 GO:0003677
Bda07g01877 235 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Bda07g01877 235 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Bda07g01877 235 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR 23 234 - -
Bda07g01877 235 Pfam AP2 domain 63 112 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00071 Bda-Chr6:732342 Bda07g01877 Bda-Chr7:36182782 8.38E-42 dispersed
Bda07g01877 Bda-Chr7:36182782 Bda15g00742 Bda-Chr15:10900169 6.72E-84 dispersed
Bda15g00741 Bda-Chr15:10894917 Bda07g01877 Bda-Chr7:36182782 2.02E-38 dispersed
Bda07g01877 Bda-Chr7:36182782 Bda07g01878 Bda-Chr7:36188859 2.33E-19 tandem
Bda06g00662 Bda-Chr6:9261373 Bda07g01877 Bda-Chr7:36182782 5.60E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16206 PF00847 AP2 7.90E-14 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01877 - K09286 nnu:104612692 268.855