Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01884 TCAGGCCTGGCTCTGGAGAGCTATTTAGGCTCCGGCCACCAACGGCCAGTGCCCCCAATGGCGCCCTCACGGGTGGCTGGAGGGTTGGCACAATCTTCCTCCAGTTCAGGGATTTTCTTCCAGGAAGACGGGCAGTCCCAGACTGTTATTAATTCTCACTTGAGCTCATCTTTTGGAAACTCATCTGCTTCAATTCCTGGAACTGGAAGATCAGATTTGATTCCAGCTTCGGGAGACATGAATAATACAGTTTTAAATAGTGTGGCAAACTCAGGTCCAAGCGTTGGGGCAAGTTCTTTGGTTACAGATGCAAACTCTGCATTTTCAGGAGGCCCTCATCTGCAAAGAAGTGCTAGCATCAATAACGAGTCATACATGCGGTTGCCTGCATCGCCTTTGTCATTCTCGTCCAATAATCTCAGTATTTCAGGATCATCAGTTATGGATGGCTCTTCAGTGGTGCAGCAGAGTTCACAACTGGACCATAATTCCCAGCAAATGCAACATAACCAAATGCAGAACCAGCACGGTGCATCAAGTGCAACTTCATTGCCATCATCGCAAACTGGCCAAGTTTCACTTCCTCTCGGTGCACGACTTTCTGGGTCTTTCGTTACGGATCCTAGTAATTTTTCTCAGGTGCAGAAGAAACCACGGTTGGACTCAAAGCAGGAAGATATTCTGCAACAGCAGGTGTTGCAACAGTTATTGCAGAGACAAGACTCGATGCAATTACAAGGCCGTAATCCACAATTGCAAGCGCTGTTACAGCAACAAAGATTTCGGCAACAACAGCAGATTTTGCAGACTATGCCACACTTGCAGAGAGCTCAATTGCAGCAGCAGCAGCAGTTGCAGCTGAGACAGCAGCTGCAACAGCAGGCAGTGCAGCCAAGTTCTCCAATGAAACGTCCATATGATGGTGGTGTATGTTCACGTCGATTGATGCAATATTTATATCATCAAAGGCAAAGGCCTCCGGACAATAGCATTGCCTATTGGAGGAAGTTTGTAACAGAGTATTACTCACCTCGTGCAAAGAAAAGATGGTGCTTGTCATTGTATGATAATGTTGGTCATCATGCACTTGGTGTGTTTCCTCAGGCAGCTATGGATGCATGGCAATGTGACATCTGTGGATCTAAATCTGGACGAGGATTTGAAGCTACTTATGAAGTACTTCCTAGACTAAACGAGATCAAATTTAGCAGTGGAGTCATCGATGAACTTTTATCTTTGGATTTACCACGTGAATGTAGATTTAATTCTGGAATAATGATGCTGGAGTATGGAAAAGCTGTCCAAGAGAGCGTATATGAGCAACTTCGTGTTGTTCGTGAGGGCCAGCTTCGTATCATATACACAAATGACTTGAAGATATTATCTTGGGAATTTTGTGCTCGACGCCATGAGGAACTGCTTCCTCGTAGGTTGGTGGCTCCACAGGTGAATCAGTTAGTTCAGGTTGCACAGAAATGCCAGAGTACAATCTCTGAAGGCGGATCTGATGGGCTGTCGCAGCAAGAATTGCAAGCTAACAGCAATATGGTACTGACGGCTGGGCGTCAACTGGCAAAGAGTCTGGAGTTGCAGTCGCTGAATGACTTGGGTTTCTCTAAAAGATATGTGAGGTGTTTGCAGATATCTGAAGTTGTCAACAGCATGAAAGATCTCGTTGATTTCTGCCGTGAGCACAAAATTGGACCGATCGAGGGGTTGAAAAATTATCCTCGCCATGCCGCCGCAGCCAAACTCCAGGTTAAGAAAATGCAAGAGATGGAGCATTTAGCTAGCGTTCAGGGTCTGCCCACCGACCGAAACACCCTTAACAAGCTAATGGCTATGCATCCGAGCCTCAACAACCAAGTCAATAACAACCATCAAATGGTTGGCCGTGGAGCTTTGAGTGGCTCTGCCCAAGCTGCTTTGGCCCTCACTACATACCAAAACATCCTGATGAGACAGAACTCAATGAACTCGATTCCTAACCCACTTCAACAGGAGGCTTCATCTTCCTTCAACAATTCTAACCAGAGCCCATCGTCGAGCTTCCTTGGGAATGCCACTTTAATCCCTGGTTCTATGCAGAACTCTCCAGCCAGTGGCTTTTCCAGCCCGAATCTCCGAACACCACAGTCTCAACCTACACAGGTGCTCACACAGAGGTCGCTGAGCTCTAATAGCCTCCTTCAACAAAGCCATCCTCAGGGCAATCAGGCTCTACAGCAGCAGATGATCCAGCAATTCTTACAGATGTCTAACACTGGACCTGGGCAAAACCCAAGTGGTAATTTGATCAGAACTGGTATGGGATATGGGGGAAGCCCTTCATTGTCGTCTCCGGCCACCAGTAATCAATTGGGAAATAATGGCCCTGGACCGGCTCCGAGCCGGAGCAGCAGTTTCAAAGCTGTTTCAAACAGTGACTCATCCGCAGGCGGTGGAAATAACGGATTCAGTCAGAGGGCACCGGATTTGGCATCAAACCTTCATCTGCAGGAAGGTATGCTTCCCGATATAGCCCACGATTTCTCGGATAATGCGTTTTTGAACAGTGATTTTGATGATAGTATGGATTATGGGTGGAAGGCTTGA 2595 47.01 SGLALESYLGSGHQRPVPPMAPSRVAGGLAQSSSSSGIFFQEDGQSQTVINSHLSSSFGNSSASIPGTGRSDLIPASGDMNNTVLNSVANSGPSVGASSLVTDANSAFSGGPHLQRSASINNESYMRLPASPLSFSSNNLSISGSSVMDGSSVVQQSSQLDHNSQQMQHNQMQNQHGASSATSLPSSQTGQVSLPLGARLSGSFVTDPSNFSQVQKKPRLDSKQEDILQQQVLQQLLQRQDSMQLQGRNPQLQALLQQQRFRQQQQILQTMPHLQRAQLQQQQQLQLRQQLQQQAVQPSSPMKRPYDGGVCSRRLMQYLYHQRQRPPDNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATYEVLPRLNEIKFSSGVIDELLSLDLPRECRFNSGIMMLEYGKAVQESVYEQLRVVREGQLRIIYTNDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTISEGGSDGLSQQELQANSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLVDFCREHKIGPIEGLKNYPRHAAAAKLQVKKMQEMEHLASVQGLPTDRNTLNKLMAMHPSLNNQVNNNHQMVGRGALSGSAQAALALTTYQNILMRQNSMNSIPNPLQQEASSSFNNSNQSPSSSFLGNATLIPGSMQNSPASGFSSPNLRTPQSQPTQVLTQRSLSSNSLLQQSHPQGNQALQQQMIQQFLQMSNTGPGQNPSGNLIRTGMGYGGSPSLSSPATSNQLGNNGPGPAPSRSSSFKAVSNSDSSAGGGNNGFSQRAPDLASNLHLQEGMLPDIAHDFSDNAFLNSDFDDSMDYGWKA 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 36290989 36296003 + Bda028857.1 Bda07g01884 10774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01884 864 Coils Coil 274 294 - -
Bda07g01884 864 MobiDBLite consensus disorder prediction 752 822 - -
Bda07g01884 864 MobiDBLite consensus disorder prediction 146 193 - -
Bda07g01884 864 MobiDBLite consensus disorder prediction 1 38 - -
Bda07g01884 864 PANTHER LIM DOMAIN-BINDING PROTEIN 205 863 IPR029005 -
Bda07g01884 864 PANTHER LIM DOMAIN-BINDING PROTEIN 24 170 IPR029005 -
Bda07g01884 864 MobiDBLite consensus disorder prediction 752 766 - -
Bda07g01884 864 Pfam LIM-domain binding protein 314 574 IPR029005 -
Bda07g01884 864 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 24 170 - -
Bda07g01884 864 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 205 863 - -
Bda07g01884 864 MobiDBLite consensus disorder prediction 773 822 - -
Bda07g01884 864 MobiDBLite consensus disorder prediction 660 740 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00054 Bda-Chr5:3255013 Bda07g01884 Bda-Chr7:36290989 0 dispersed
Bda07g01884 Bda-Chr7:36290989 Bda13g01540 Bda-Chr13:38631724 4.16E-115 dispersed
Bda07g01884 Bda-Chr7:36290989 Bda01g01383 Bda-Chr1:49717568 1.20E-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01884 - - pper:18787712 1158.28