Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01891 ATGCCTTCATGGTGGGGGAAGTCATCATCCAAAGAAGCAAAGAAAAAGCCTAGCAAGGAAAGTTTTATCGACACATTACAGCGAAAATTTAAAGGTCCATCTGAAAATAAAGTATCAGGAGGATCTCGGAGGCATTGTGTTGATACTGCTTCTGAGATTGGATCTAGATCCCCTTTGGAATCAAGATCGCCATCTCCGTCCAAAAAAGTTTCAAGATGTCAAAGTTTTGCTGAAAGGCCCCGTGCTCAACCGCTCCCTCTTCCTGGTCTGCGCCCTGCCGCTGTAAGTCGCACAGATTCTGGTATTAGTGAATCAACAAAGCCTAGATCAGAAAGAAACTCCAAGGCTTCATTGTTTCTTCCACTTCCCAGGCCTGCCTGCATCCGTAGTAGGCCAAGTCCTGCTAATTTAGATGGAGATTTGGTAACTGGTTCTGTTTCTAGTGAGTGTTCATTAGAGAGTGATGATCCTGCTGATTTGCCCTGCCGCAGCCTTCAGGAAACGGATTGTGACCCTGGGACTAAGACTGCTTCAGCCAGCCCTTCCAGTGTGATTTTCAAGCATCAAGCTACTGCTATCACTCAGCTAAACTCCAGAGAGAGCAAAAAATCAGAAGACCTTTCATTCAATGACAATATATCCTCGACATCGCCTAAAAGGAGGCCTTTGGGCAATCATGTGAAAAATCTACAGGTTCCACCTCCTGGAGCATTCTGTAGTGCTCCAGAAAGTTCTTTGTCAAGTCCTTCTAGAAGCCCGATTAGAGCATATGGCACAGAACAAGTTTTGAACGCTGCATGGGGTGGGAAGCCTTATCCAGATGTAACTTTAATTGGATCTGGCCACTGTTCTAGTCCTGGTTCGGGTCATAATTCAGGGCATAATTCAATGGGAGGTGATATGTCAGGCCAGTTATTTTGGCAACAGAGTAGGGGTAGCCCTGAATATTCTCCAGTGCCGAGTCCTAGAATGACTAGTCCAGGCCCTAGCTCAAGAATTCACAGTGGGGCTGTCACACCTATTCATCCTAGAGAAGGGGGGATGCCCACTGAGTTACAGACTAGCAGGCCAGAAGAGAAACAAAGTCATCGATTACCTCTCCCTCCTATAGGAATTTCAAATTCTTCTCCATTTTCTCACCCAAGTTCAGCTGTAACATCTCCTTCTCTGCCAAGAAGTCCAGGAAGAGCAGAGACTCCAGCAAGCCCCAGCTCACGCTGGAAAAAAGGGAAGCTTCTTGGTAGGGGCACATTTGGACATGTTTATGTTGGGTTTAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTCACATTATTTTCAGACGACGCAAAGTCTAAGGAAAGTGCCAAACAATTAATGCAGGAAATTGCTTTGCTGAGCCGTTTACGGCATCCTAACATTGTGCAGTATTATGGGTCTGAAACAGTGGGTGACAAGTTATACATTTACTTGGAGTATGTTTCTGGTGGATCCATTCATAAGCTTCTCCAGGAATATGGACAGTTTGGTGAACTAGCGATTCGCAGCTACACTCAACAAATACTTTCAGGGCTTGCATATTTACATGCTAAAAATACTGTCCATAGGGATATCAAAGGAGCAAACATTCTCGTTGATCCAAATGGCCGTGTTAAGTTGGCAGACTTTGGGATGGCAAAACATATTGCTGGGCAGAGTTGTCCGTTGTCTTTCAAGGGCAGCCCCTATTGGATGGCTCCTGAGGTTATTAAAAATTCAAATGGTTGCAACCTTGCTGTGGATATCTGGAGTCTAGGATGCACTGTGTTAGAGATGGCTACCACAAAGCCACCTTGGAGTCAGTATGAAGGGGTTGCTGCCATGTTTAAAATTGGTAATAGTAAAGAATTACCAGCAATTCCAGATTACCTCTCAATTGATGGAAAAGATTTTGTGAGGCAATGTTTGCAAAGAAATCCACTTCATCGACCTATGGCTGCTCAACTTTTGGAGCATCCTTTTGTCAAATATGCTGCACCTATAGAAAGGCCAATTCTCGGCTTTGACCAATCAGATCTAAGCCCCATGATTACAAATGGAGTTAAAGCTATGGGAATTGGCCAAGCCAGGAATCATAACATCTTGGATTCAGACAGAGTTGCTCCTCATTCAACTAGATTATCAAAAGTTTGTTTACATGCCAGTGAAATCCATATGCCAAGAAACATATCTTGCCCTGTTTCGCCCATTGGAAGCCCTCTTTTGAAGGCTCATTCACCTCAACACACCAGTGGAAGAATGTCTCCGTCTCCTATCTCTAGTCCAAGGACCATTTCTGGATCGTCTACCCCTCTTACTGGTGGAAGTGGTGCAATTCCATATAACCACCTGAAACATTCTATCTGCTTCCAAGAAGGGTTCGGAAGCATGCCAAAATCGACTACAAATAGTTTTTACAACAATAGTTCTTCCTATCATGACTCAAATCTTGATATTTTTCGCGGGATTCAACCAGGGTCTTGCATTTTTTCTGAGTTGATCATGCTTGAGAATGATGTTTTGAAGCAGGTGGGAAGGCCTGTCTCGGGGGAACCGTACGATAGTCAGTCAATCTTGGCTGATCGTGTGTCTCAGCAGCTCCTCAGGGATAATGCTCAAGTCAATTCTTCTCTGGATTTACGACCTACCTCTCCTTTGTCCAGCCGCATGAGCGGCAATTAA 2685 44.47 MPSWWGKSSSKEAKKKPSKESFIDTLQRKFKGPSENKVSGGSRRHCVDTASEIGSRSPLESRSPSPSKKVSRCQSFAERPRAQPLPLPGLRPAAVSRTDSGISESTKPRSERNSKASLFLPLPRPACIRSRPSPANLDGDLVTGSVSSECSLESDDPADLPCRSLQETDCDPGTKTASASPSSVIFKHQATAITQLNSRESKKSEDLSFNDNISSTSPKRRPLGNHVKNLQVPPPGAFCSAPESSLSSPSRSPIRAYGTEQVLNAAWGGKPYPDVTLIGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQQSRGSPEYSPVPSPRMTSPGPSSRIHSGAVTPIHPREGGMPTELQTSRPEEKQSHRLPLPPIGISNSSPFSHPSSAVTSPSLPRSPGRAETPASPSSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSETVGDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHIAGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPAIPDYLSIDGKDFVRQCLQRNPLHRPMAAQLLEHPFVKYAAPIERPILGFDQSDLSPMITNGVKAMGIGQARNHNILDSDRVAPHSTRLSKVCLHASEIHMPRNISCPVSPIGSPLLKAHSPQHTSGRMSPSPISSPRTISGSSTPLTGGSGAIPYNHLKHSICFQEGFGSMPKSTTNSFYNNSSSYHDSNLDIFRGIQPGSCIFSELIMLENDVLKQVGRPVSGEPYDSQSILADRVSQQLLRDNAQVNSSLDLRPTSPLSSRMSGN 894
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 36324652 36329479 + Bda028864.1 Bda07g01891 10781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01891 894 MobiDBLite consensus disorder prediction 744 770 - -
Bda07g01891 894 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 811 - -
Bda07g01891 894 ProSiteProfiles Protein kinase domain profile. 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01891 894 MobiDBLite consensus disorder prediction 9 26 - -
Bda07g01891 894 MobiDBLite consensus disorder prediction 875 894 - -
Bda07g01891 894 MobiDBLite consensus disorder prediction 208 222 - -
Bda07g01891 894 Gene3D Transferase(Phosphotransferase) domain 1 404 679 - -
Bda07g01891 894 CDD STKc_MEKK1_plant 406 663 - -
Bda07g01891 894 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 811 - -
Bda07g01891 894 MobiDBLite consensus disorder prediction 368 393 - -
Bda07g01891 894 MobiDBLite consensus disorder prediction 198 228 - -
Bda07g01891 894 MobiDBLite consensus disorder prediction 745 770 - -
Bda07g01891 894 MobiDBLite consensus disorder prediction 1 181 - -
Bda07g01891 894 SMART serkin_6 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01891 894 MobiDBLite consensus disorder prediction 54 72 - -
Bda07g01891 894 SUPERFAMILY Protein kinase-like (PK-like) 405 761 IPR011009 -
Bda07g01891 894 MobiDBLite consensus disorder prediction 284 408 - -
Bda07g01891 894 Pfam Protein kinase domain 408 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01891 894 MobiDBLite consensus disorder prediction 284 316 - -
Bda07g01891 894 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01408 Bda-Chr1:49972122 Bda07g01891 Bda-Chr7:36324652 2.75E-80 dispersed
Bda04g00294 Bda-Chr4:45825341 Bda07g01891 Bda-Chr7:36324652 1.13E-113 dispersed
Bda07g01891 Bda-Chr7:36324652 Bda15g00714 Bda-Chr15:10541285 0 dispersed
Bda07g01891 Bda-Chr7:36324652 Bda04g00372 Bda-Chr4:50125331 8.79E-141 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69747 PF00069 Pkinase 3.00E-70 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01891 K20717 - twl:120003884 1268.83