Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01898 ATGGAGACCCAACACCTCCACTTTCTCTGTCTAGTTCTTCTCTCTCTGCTCCCTGCTTTCTCTGCCTCCTTTGTTCCCTTAGATAATTACCTCCTCAATTGTGGGTCAGCCACTAACTCCTCGTTTTTTAACCGAATATTTATCGGCGATTCGACGAAATCCGGCTCCGTATTTCTCTCTTCGGACCGATCAGTTTCGGTTAAAAACCCAAACCCGCCTCCGAATTCACCCAGTTTGTACCGTACAGCGAGAGTTTTCACAAGCTCTTCAAGCTATCGATTCGGCATCAAGAAAAACGGGACACATTTGGTACGTTTCCACTTCTCGCCGTTTGTAGTTCCAGATTTCGCTTTGGCCTCTGCCAGTTTTAGGATTTTGGTTAATGGGTTTTTGCTTTTGAGTGATTTCCATGCTCGAAATACTACGATTAAGGAGTACATATTGACAGTGGATGATAATCTTCTTCAAATTGTGTTTGAGCCCTTGGGCGATTCGGGTTTTGGATTTGTGAATGCTATTGAAGTCTTTTCTGCTCCTGTGGAGCTAATTAACGATAATGGAGCAAGATTAGTTGGGGAAATTGGGGTTGGAGAATACTTCAATCTTTCATCACACGTTCTAGAGACTGTTCTTAGGATTAATGTTGGAGGGTATGATATTACACCTTTCAATGACACTTTGTGGAGAACTTGGGTTCCTGACGATAATTTTTTGGTCCTTAAATCGGCTGCAAAACAAGCTGTCACAACCCGTCCTCCGAATTACAAGGACTCCCTTTTAAGTCGAGAGATTGCTCCGGATAATGTTTATATGACAGCCCAGCAAATGAACAAAGAAAATGCAACTTTTGGGGCTAAATTCAATATCACTTGGAGTTTTCCAGTGGGTAGAAGAGGCGGAATGCACTTAGTCAGGTTGCATTTCAGCGATATTGTTAGTTCGGCTCTTAATTTGTTGTATTTTAACGTATATATCAATGGCTATTCTGCCTATGCTGATATGGATTTGTCCTCTCTTTCCTTCCATTTACTTGCATCGCCTGTTTACATTGATTTTATCGTGGATTCAGATGATAATGGAGTCATACAAGTAAGTGTCGGACCTTCTGCTCTTAGCAGTCCTTTGAGACTGAATGCGATTTTGAATGGTGCGGAGATCATGAGAATGGTGAATGTGAATGACAGTAGATCGCAAGGACGAACAAAGGAAAAAGATAAATGGATCTTACTAGGTTCGATTGTTGGCGGGTTCATAGGTTTATGTGTGATTGTAGTCATTATCTTCCTTGGTATAAAATGCAGGAAGAAGAAGAAACCTAAGCCGAGACGCACAGAAAGTGGAGGCTGGACTTCATTGCATGCATTTGGCGGCAGTAGTTTCGGTTACTTGGATCCCGAATATTTCCGGAGGCAACAATTAACCGATAAATCAGACGTTTATTCTTTCGGTGTGGTGCTTTTAGAGGTTCTTTGTGCTAGACCTGCTGTCGATCCATTGCTTGCAAGAGAACAAGTGAATTTAGCTGAATGGGCAATGGAGTGGCAAAAGAAAGGCGTGATTGAACAAATAATCGACCCCAAACTTGTTGGGAAAATCAATTTAAGTTCTTTAAAAAAATTTGGAGAAACAGCTGAGAAATGTTTGTCTGAGTACGGAGTCGATAGGCCATCGATGGGCGACGTTTTATGGAACTTGGAATATGCACTTCAACTCCAAGAAAATGGAACGGTAAATGAACAAGACGCCATTGTTGTAAATCCAACAGAGGCTCAAGCTCCCCAGATTTCTGCTGATTTTCCCGCCTCGAGCACAGGAAGAGAGGGAGAAGAAGACAACGGCCGCTCGGACATAAGTACGAGCAAAGTGTTTTCCCAGTTGATGAATAATGCAGGCAGATAG 1899 42.39 METQHLHFLCLVLLSLLPAFSASFVPLDNYLLNCGSATNSSFFNRIFIGDSTKSGSVFLSSDRSVSVKNPNPPPNSPSLYRTARVFTSSSSYRFGIKKNGTHLVRFHFSPFVVPDFALASASFRILVNGFLLLSDFHARNTTIKEYILTVDDNLLQIVFEPLGDSGFGFVNAIEVFSAPVELINDNGARLVGEIGVGEYFNLSSHVLETVLRINVGGYDITPFNDTLWRTWVPDDNFLVLKSAAKQAVTTRPPNYKDSLLSREIAPDNVYMTAQQMNKENATFGAKFNITWSFPVGRRGGMHLVRLHFSDIVSSALNLLYFNVYINGYSAYADMDLSSLSFHLLASPVYIDFIVDSDDNGVIQVSVGPSALSSPLRLNAILNGAEIMRMVNVNDSRSQGRTKEKDKWILLGSIVGGFIGLCVIVVIIFLGIKCRKKKKPKPRRTESGGWTSLHAFGGSSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEVLCARPAVDPLLAREQVNLAEWAMEWQKKGVIEQIIDPKLVGKINLSSLKKFGETAEKCLSEYGVDRPSMGDVLWNLEYALQLQENGTVNEQDAIVVNPTEAQAPQISADFPASSTGREGEEDNGRSDISTSKVFSQLMNNAGR 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 36373003 36375854 + Bda028871.1 Bda07g01898 10788

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01898 632 Gene3D - 29 180 - -
Bda07g01898 632 Gene3D - 206 390 - -
Bda07g01898 632 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 17 443 - -
Bda07g01898 632 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 458 577 - -
Bda07g01898 632 SUPERFAMILY Protein kinase-like (PK-like) 459 563 IPR011009 -
Bda07g01898 632 PANTHER OS07G0166700 PROTEIN 17 443 IPR045272 GO:0004714|GO:0006468
Bda07g01898 632 PANTHER OS07G0166700 PROTEIN 458 577 IPR045272 GO:0004714|GO:0006468
Bda07g01898 632 Gene3D Transferase(Phosphotransferase) domain 1 424 591 - -
Bda07g01898 632 MobiDBLite consensus disorder prediction 593 623 - -
Bda07g01898 632 Pfam Malectin-like domain 32 388 IPR024788 -
Bda07g01898 632 Pfam Protein tyrosine and serine/threonine kinase 461 560 IPR001245 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01898 - - - tcc:18605622 551.206
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00993 Bda-Chr3:9005857 Bda07g01898 Bda-Chr7:36373003 5.53E-89 dispersed
Bda07g01898 Bda-Chr7:36373003 Bda14g00568 Bda-Chr14:4335371 7.79E-59 dispersed
Bda07g01898 Bda-Chr7:36373003 Bda02g00799 Bda-Chr2:48675990 1.02E-62 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g749 . . . Bda07g01898 Bpe03g00149 . . Bma14g02048 Cmo16g00112 Cmo18g01293 . . . . . . Cpe14g00089 . . . . . . . . . . . . . . . . . . Lsi05g01200 . . . . Blo09g00068 . . . . . . . . . Cma16g00104 Cma18g01264 Car16g00093 Car18g01174 Cpe09g00072 . . . . . . . . Cla05g00907 . . . . . . . Csa03g01740 Chy06g00971 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009011 1 0 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 0 0 1 0 1 0 1 29
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69748 PF12819 Malectin_like 8.90E-32 CL0202 Bda PK