Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01901 ATGGCTGCAAATGATGTTCCTTGTTGTGAGCCAATGTTTTGGCTTTACCTTATAATTTGTGGAGCACTTGTAGCTTTTGCTGGCCTAATGTCTGGCCTTACCTTAGGACTCATGTCCCTTAGCATCGTCGATCTAGAGGTCCTCTCTCGAGCGGGAAATCCCCAGGACAGAAAAAACGCAGCCAAAATTCTACCTCTGGTTAAGAACCAACACTTGTTGTTGTGCACTCTTCTCATAGGAAACTCCCTTGCAATGGAGGCCTTGCCTATATTTCTTGATGCACTTCTTCCAGCTTGGGGTGCTATTCTAATATCGGTCACTCTTGTTCTTGCTTTTGGTGAGATAATACCGCAAGCTATTTGTTCACGATACGGTCTGCGTGTCGGAGCAAAACTCTCGGTCATCGTCCGGTTGCTCGTCTTATTTTTCTTTCCTCTCTCTTATCCCATTAGTAAGCTTCTGGATTTGCTGCTTGGGAAAGGGCATGCTGCTTTATTACGAAGAGCTGAGCTTAAAACATTTGTAGATATGCATGGAAACAAGGAAGGGAAAGGAGGAGAGTTGACAAAAGATGAAACAACCATAATAACAGGAGCATTGGATTTGACTTTGAAAACAGCTGAAGATGCTATGACTCCTCTCTCCAACATCTTCTCTTTGGACATCAATTCTAAGCTTGATGAGAAAACCATGGGATTGATTATGAGCCGAGGACATAGTCGGGTTCCCGTTTACTCCGGAAGCACCCAGAATATCGTTGGACTTATTCTAGTTAAGAACCTCATCAAGTGTCGGCCGGAAGACGAAACTCCCATTAAAGACCTCGCCATCCGAAAAATTCCAAGATTTTTTTTTCAGGGTGCACGACTAAATTGCCAGTTGTACGATATGATGAATGAGTTCCAAAAAGGACACAGCCATATGGCCATTGTGGTTAGAAGCAACAACGAAGTAAAAGAGATTGCAGAAAGCAAAAGCAAAGAGGAAGAGGAGAAGAAGAGAGATGAAGTTGTTTTTGATATAAAGACACAGACTGTTCCAAGTGAAGACATTATTGGAATTATTACTCTTGAAGATGTCATGGAAGAACTTCTCCAGGAGGAGATATGGGACGAGACTGATGAATATGTGGTCGTTCACAATAAGCTGAAGATCAACATGGTACCGTCGAGAAGATCGTCACCGAGATCACCGGGCCTTCTTTATGCTGGAAATGACACCCTGTTTGAATCAACAGGTCTGCACGGGAAGTCATCAGTTCGAAAAGTTGCTCTTCGGACTGGGAAGGTTGAGGTTCTGCAGAAAATGGATAAATCTGATTTTGGTGAGGGTTTAACCCTTCTTGGTAAAAGGCTGTTCCAAGTTACTTGGTTGCAGAAAACTGGTTTCATTTATAACGTAAACGATTTAAGTAAAATTAAAACATTCACCCATCAAATGAATGATGGTTGGGGACTGGCTACAGATGGAAAAATTTTATTTGGAAGTGATGGGTCGTCCACATTGTACCAAATCAACCCTCAAACATTCAAAGTCATTGCTAAAAAAGTTGTAAAGTACAAAGGTCTTGAGGTAAACAACCTGAATGAGCTGGAATTTGTAAATGGTGAAGTTTGGGCAAATGTTTGGATGACGGACTGCATTGCTAGAATCATCCCTGAAGATGGAAGTGTGGTCGGATGGATACTTCTTCCAACTCTAAGGTTTTGCTCTTTAACTCCCCTTGTGCTAGGTATTGATGTTTTAAACGGAATTGCCTGGGACAGTGAGAGGAATCGAATATTTGTGACAGGGAAAGGCGGAGAGGTGCCTTTGTCCGAAATGTTTGGTACATTTGCTCTCTCAGTCGGCGCTGCCGTGGGAATGGAGTTTTGGGCGAGATGGGCTCATAGAGCCCTATGGCACGCTTCCCTATGGCACATGCATGAGTCGCATCATAAACCGAGAGAAGGACCATTCGAGCTTAACGATGTCTTCGCCATAACTAATGCTGTCCCTGCAATTGCCCTCCTCTCTTATGGCTTCTTCCACAAAGGCCTTGTTCCTGGTCTCTGCTTTGGAGCTGGGCTCGGAATTACGGTGTTCGGGATGGCCTATATGTTTGTCCACGATGGTCTTGTCCACAGAAGATTTCCGGTGGGCCCCATTGCCAACGTGCCATATTTCCAAAGAGTCGCTGCAGCTCACAAGCTGCACCACTCGGACAAGTTCGAGGGCGTTCCATACGGGTTATTTTTGGGGCCGAAGGAGATTGAAGATGTGGGAGGATTAGAAGAGTTGGAGAAGGAGATTAGTAGAAGAAAGAAATCCTACAATGCCTCATAG 2325 44.17 MAANDVPCCEPMFWLYLIICGALVAFAGLMSGLTLGLMSLSIVDLEVLSRAGNPQDRKNAAKILPLVKNQHLLLCTLLIGNSLAMEALPIFLDALLPAWGAILISVTLVLAFGEIIPQAICSRYGLRVGAKLSVIVRLLVLFFFPLSYPISKLLDLLLGKGHAALLRRAELKTFVDMHGNKEGKGGELTKDETTIITGALDLTLKTAEDAMTPLSNIFSLDINSKLDEKTMGLIMSRGHSRVPVYSGSTQNIVGLILVKNLIKCRPEDETPIKDLAIRKIPRFFFQGARLNCQLYDMMNEFQKGHSHMAIVVRSNNEVKEIAESKSKEEEEKKRDEVVFDIKTQTVPSEDIIGIITLEDVMEELLQEEIWDETDEYVVVHNKLKINMVPSRRSSPRSPGLLYAGNDTLFESTGLHGKSSVRKVALRTGKVEVLQKMDKSDFGEGLTLLGKRLFQVTWLQKTGFIYNVNDLSKIKTFTHQMNDGWGLATDGKILFGSDGSSTLYQINPQTFKVIAKKVVKYKGLEVNNLNELEFVNGEVWANVWMTDCIARIIPEDGSVVGWILLPTLRFCSLTPLVLGIDVLNGIAWDSERNRIFVTGKGGEVPLSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHKPREGPFELNDVFAITNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFQRVAAAHKLHHSDKFEGVPYGLFLGPKEIEDVGGLEELEKEISRRKKSYNAS 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 36392314 36409909 - Bda028874.1 Bda07g01901 10791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01901 774 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 400 IPR045095 GO:0010960
Bda07g01901 774 Pfam Fatty acid hydroxylase 618 745 IPR006694 GO:0005506|GO:0008610|GO:0016491
Bda07g01901 774 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 400 - -
Bda07g01901 774 Coils Coil 311 331 - -
Bda07g01901 774 ProSiteProfiles CNNM transmembrane domain profile. 9 192 IPR002550 -
Bda07g01901 774 CDD CBS_pair_CorC_HlyC_assoc 206 362 IPR044751 -
Bda07g01901 774 Pfam Cyclin M transmembrane N-terminal domain 19 188 IPR002550 -
Bda07g01901 774 Gene3D - 190 372 IPR046342 -
Bda07g01901 774 SUPERFAMILY YWTD domain 418 601 - -
Bda07g01901 774 ProSiteProfiles CBS domain profile. 211 272 IPR000644 -
Bda07g01901 774 Coils Coil 757 774 - -
Bda07g01901 774 SUPERFAMILY CBS-domain pair 196 366 IPR046342 -
Bda07g01901 774 Pfam Glutamine cyclotransferase 398 599 IPR007788 GO:0016603|GO:0017186
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00490 Bda-Chr7:6141519 Bda07g01901 Bda-Chr7:36392314 2.42E-103 dispersed
Bda07g01901 Bda-Chr7:36392314 Bda15g00473 Bda-Chr15:7908185 4.66E-145 dispersed
Bda07g01901 Bda-Chr7:36392314 Bda03g00259 Bda-Chr3:2312733 2.24E-158 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01901 K16302 - csv:101210102 545.428