Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01909 ATGGAAGAAGCACTGGTGCTGTACCCTTCTTCAGGGATGGGGCATCTCGTCCCCATGGTTGAGTTGGGCAAGCTTATTCTCAAGCACCATCCTTTCTTCTCCGTCAAAATCCTCATCCTCGATCCTCCTTACTCCACTGGTTCGACCTCCGATTACGTATCCGCCATCTCCGTACCGTCTCTGACCTTCCACCACCTCCCCACTCTCTCTCTCCCTCCTTCCTCTCCTCAAATGGTCGACGATCTCGCCTACCAGCTTCCTCGCCTCAACAACCCCAACCTCCGTAGAACACTGGAGAAAATCTCGGAGACCGCCGTCGTTAGAGCTCTGATGATCGATTTCTTTAACGACGTCGCTTTGGAAGTCGCCGGAGATCTGAGAATACCCGCTTACTTTTTCTTCACATGCGGCGCCGGAGGCCTGGCGGGCTTTCTGTACTTACCCACTTTACACAAAATCACTACCGGAAATTTCAAAGACGAAAAGGTTGTATTCAACATCCCCGGCACACCTCCAATCCTCTCTTCCGATATGCCGACTCCTCTGCAAATTCGCAACACGAACGTCTACAACAGTATGCTTAATACGGCAGTCCAATTTACTAAATCGAGAGGAATTTTGGTGAATACATTCACCGAGCTCGAATCAACAGCTATGGCGGCTTTAACGAACGATATGTGCGTGATAGACTGCCCTACGCCGCCGATCTTCGCAGTCGGACCAGTGATAGCGAGCGGCAACGGGGGAAAAGAAGAAGAACGACACGAATGCTTGAGGTGGCTGGATTCGCAGCCGAGCAAAAGCGTGGTGTTTCTTTGCTTCGGAAGTATGGGTTTGCATTCGGCGAAGCAGATAAGGGAGATGGCTATGGGGATCGAGAAAAGCAGGCATAGGTTCCTGTGGGTGGTCCGGTCACCGCCGGAAGAAGAAGAAGAAGAAGAAGGGAAAAGCGAGACGGTAAGGAGGCCGGAGCCGGAGTTGGAGAAACTATTACCGGAGGGATTTCTGTGTCGGACGAAAAGCAGGGGAATGGTGGTCAAGTCGTGGGCTCCGCAGGTGGCGGTGCTGAATCACGATGCCGTCTGCGGCTTTGTCTCCCACTGCGGTTGGAATTCTCTCATTGAAGCGATTTCTGCAGGCGTGCCACTTCTGGCATGGCCACTGTACGCAGAGCAGAGAATGAACAGAATAATTCTGGTGCAGCAGATGAAGATAGGGTTGTCGGTGAACGAGTCAGAAGACGGGTTTGTGACCGCCGCCGAGTTGGAAGAGCGAGTGAGGGAATTGATGGAGACGGAGAGAGGAAGAGAGGTGAGAGAGAGGGTTGAGAGGATGAGAGATGAAGCTGCTGCAGCAATGGAAGAAGACGGCTCGTCTGTCCTAGCACTGGCTCAGTGGGCTAAGCTGCTGATGAAAGACTCCCAATTTTAG 1431 52.48 MEEALVLYPSSGMGHLVPMVELGKLILKHHPFFSVKILILDPPYSTGSTSDYVSAISVPSLTFHHLPTLSLPPSSPQMVDDLAYQLPRLNNPNLRRTLEKISETAVVRALMIDFFNDVALEVAGDLRIPAYFFFTCGAGGLAGFLYLPTLHKITTGNFKDEKVVFNIPGTPPILSSDMPTPLQIRNTNVYNSMLNTAVQFTKSRGILVNTFTELESTAMAALTNDMCVIDCPTPPIFAVGPVIASGNGGKEEERHECLRWLDSQPSKSVVFLCFGSMGLHSAKQIREMAMGIEKSRHRFLWVVRSPPEEEEEEEGKSETVRRPEPELEKLLPEGFLCRTKSRGMVVKSWAPQVAVLNHDAVCGFVSHCGWNSLIEAISAGVPLLAWPLYAEQRMNRIILVQQMKIGLSVNESEDGFVTAAELEERVRELMETERGREVRERVERMRDEAAAAMEEDGSSVLALAQWAKLLMKDSQF 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 36517004 36518532 - Bda028883.1 Bda07g01909 10799

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01909 476 Coils Coil 435 455 - -
Bda07g01909 476 PANTHER GLYCOSYLTRANSFERASE 1 470 - -
Bda07g01909 476 CDD GT1_Gtf-like 6 452 IPR002213 GO:0008194
Bda07g01909 476 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 210 433 IPR002213 GO:0008194
Bda07g01909 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 472 - -
Bda07g01909 476 Gene3D Glycogen Phosphorylase B; 6 459 - -
Bda07g01909 476 PANTHER GLYCOSYLTRANSFERASE 1 470 - -
Bda07g01909 476 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Bda07g01909 476 Gene3D Glycogen Phosphorylase B; 255 454 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01909 - - K12938 oeu:111405618 474.167
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01909 Bda-Chr7:36517004 Bda07g01963 Bda-Chr7:37060626 0 dispersed
Bda11g01555 Bda-Chr11:48388334 Bda07g01909 Bda-Chr7:36517004 1.99E-39 dispersed
Bda07g01905 Bda-Chr7:36463931 Bda07g01909 Bda-Chr7:36517004 0 proximal
Bda07g01909 Bda-Chr7:36517004 Bda07g01910 Bda-Chr7:36532352 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g797 . . . Bda07g01909 Bpe03g00161 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0015390 4 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 12