Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01931 ATGGGCTATGGAAAGCTAAAACCGTCTGACCCAGGAGGGTCACCCTTCAATCAATCTGAAGCCTCTCCCTCCAACCCTCCTCCACCACGCAGCTGGAGGAAGAAGCTTCTCATTTTCTCCTTTCTCTCTGTTATTCTACTCATCGCCGCCGTCGTCTCTGCCGTTCTCCTCGTTGGTCTTCGAACTAAAACTTCGGGTCGACCCGACATCAATCTCCCTCGTAAACCGACGCAGGCTATTTCTCGGACCTGCAGCCGAACTCGGTTCCCGACCCTTTGCGTCAACTCACTAGCTGCCTTCCCCGGCTCTGCGAGCGCCACCGAGGACGACCTCATCCACATTTCCTTCAACATGACGCTGCAGCATTTCTCCAGGGCCCTCTACCTCTCCACCGGAATCTCCAATTTTCCGATGAATTCTCTCGTCCGATCTGCCTACGAAGATTGCCTGGAGCTCCTCGAAGATTCCATCGACGCGATGGCTCGCTCATTGTTCTCCGTCTCACCACTTCCGGGCGAGGACACTTATACTGTTGGCTCCACTCACGACATCCTCACTTGGCTCAGCGCCGCACTGACCAACCAAGACACCTGCATGGAAGGATTCGAAGCTGTTAGCGGAACTGTCAAGAATCAAATGACTGAGGGTCTTCGCGATTTGTCGGAGCTAGTAAGCAACTGCCTGGCCATTTTTTCGGGGACCGACTCCGGCGATTTTTCCGGCGTGCCTATTCAGAACAGGCGGAGGCTAATGGAGGCCGCGGATACGTTGGACGAAAAGGAGAAACAATCGGAGGAATTTCCGAGATGGATGAGTCGGGAAGAGAGAGAATTGCTGAGTTTGCCGGTTTCTGCGATTCAAGCAGACATTATAGTGTCCAAGGATGGAAACGGAACTTTCAAAACACTAACGGAGGCGATCAAGAAGGCGCCCGAGAACAGCGATCGCCGAACGATAATCTACGTGATGGCAGGAAGGTACGAAGAAGATATCTTAAAGGTGGGAAGGAAAAAGACGAACCTAATGTTCATCGGAGATGGGAAGGGCAAAACGGTCATATCGGGTGGCAAAAGTGTGTACGATGAGCTGACGACATTTCGCACTGCCACCTTTGCTGCGACGGGAGCAGGAGTGATATTACGAGACATTACGTTTGAGAATTATGCCGGACCAAACAAGCACCAGGCGGTGGCTCTCCGAATCGGAGCTGACCATGCAGTGGTCTATAGATGCAACATCATAGGCTACCAAGACACGCTCTATGTGCACTCAAATCGTCAATTCTTTCGAGAATGCGACATATACGGAACTGTAGATTTCATTTTTGGCAATGCTGTTGTTGTATTTCAAAATTCTAGTATTTACGCTCGAAAGTCTCTGCCCCTACAAAAGAACACCATCACAGCCCAAAACCGAAAGGATCCAAACCAAAACTCCGGCATTTCAATCCATGCTTGTCGGATTTTGGCCACCTCTGATCTCGAGCCGTCAAAGGGTAGCTCACCGACGTATCTCGGTCGACCATGGAAACTATACTCTAGGACATGTCCTGGCGCAGCAGTGGGTCAACGGGTCGGCTGGCCCGGGTATCGAGTCATTACGTCGACCATAGAAGCAAGTAAGTTCACGGTAGCTCAATTTATATACGGGTCATCATGGCTACCGGCCACCGGAGTTGCTTTCTTGGCCGGACTTATCGGAATAACTAACCTGAAATGTCAATGTACTTTACATAGAAAATAA 1743 50.72 MGYGKLKPSDPGGSPFNQSEASPSNPPPPRSWRKKLLIFSFLSVILLIAAVVSAVLLVGLRTKTSGRPDINLPRKPTQAISRTCSRTRFPTLCVNSLAAFPGSASATEDDLIHISFNMTLQHFSRALYLSTGISNFPMNSLVRSAYEDCLELLEDSIDAMARSLFSVSPLPGEDTYTVGSTHDILTWLSAALTNQDTCMEGFEAVSGTVKNQMTEGLRDLSELVSNCLAIFSGTDSGDFSGVPIQNRRRLMEAADTLDEKEKQSEEFPRWMSREERELLSLPVSAIQADIIVSKDGNGTFKTLTEAIKKAPENSDRRTIIYVMAGRYEEDILKVGRKKTNLMFIGDGKGKTVISGGKSVYDELTTFRTATFAATGAGVILRDITFENYAGPNKHQAVALRIGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAVVVFQNSSIYARKSLPLQKNTITAQNRKDPNQNSGISIHACRILATSDLEPSKGSSPTYLGRPWKLYSRTCPGAAVGQRVGWPGYRVITSTIEASKFTVAQFIYGSSWLPATGVAFLAGLIGITNLKCQCTLHRK 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 36823276 36825433 + Bda028911.1 Bda07g01931 10821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01931 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 232 IPR035513 -
Bda07g01931 580 CDD PMEI-like_3 84 232 - -
Bda07g01931 580 Pfam Plant invertase/pectin methylesterase inhibitor 79 230 IPR006501 GO:0004857
Bda07g01931 580 PANTHER PECTINESTERASE 517 565 - -
Bda07g01931 580 PANTHER PECTINESTERASE 28 515 - -
Bda07g01931 580 PANTHER PECTINESTERASE 517 565 - -
Bda07g01931 580 PANTHER PECTINESTERASE 28 515 - -
Bda07g01931 580 TIGRFAM PME_inhib: pectinesterase inhibitor domain 50 232 IPR006501 GO:0004857
Bda07g01931 580 Pfam Pectinesterase 289 515 IPR000070 GO:0030599|GO:0042545
Bda07g01931 580 SUPERFAMILY Pectin lyase-like 284 564 IPR011050 -
Bda07g01931 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 233 IPR035513 -
Bda07g01931 580 Gene3D - 283 565 IPR012334 -
Bda07g01931 580 ProSitePatterns Pectinesterase signature 2. 434 443 IPR033131 -
Bda07g01931 580 SMART PMEI_2 75 230 IPR006501 GO:0004857
Bda07g01931 580 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g01931 Bda15g00760 CCT
Bda05g00123 Bda07g01931 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01931 Bda-Chr7:36823276 Bda10g00629 Bda-Chr10:40316479 3.05E-124 dispersed
Bda05g00123 Bda-Chr5:5965310 Bda07g01931 Bda-Chr7:36823276 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01931 - - zju:107414790 786.178