Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda07g01952 | ATGGCTTCAGATCCGAAGGTTCACTCGTTCGAAGACGTGGCCAAGCACAACAAGACCAAAGATTGCTGGCTTATTATTTCTGGCAAGGTGTATGATGTAACTCCTTTCATGGACGATCATCCAGGAGGCGACGAAGTACTACTGTCATCGACTGGAAAAGATGCAACTAATGACTTTGAAGATGTTGGGCACAGCGATTCTGCAAGAGAAATGATGCACAAGTATTACATTGGGGAGATCGATTCATCGATGGTGCCACTCAAACGCAAGTATATTCAACCGCAACAAGCCTCTTACAATCCAGACAAGACCCCCGACTTTGTCATCAAGATTTTACAGTTTCTAGTCCCGCTCTTGATCTTGGGCTTAGCATTTGCCGTTCGACACTACACCAAGAACGAG | 402 | 45.52 | MASDPKVHSFEDVAKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDSAREMMHKYYIGEIDSSMVPLKRKYIQPQQASYNPDKTPDFVIKILQFLVPLLILGLAFAVRHYTKNE | 134 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 36938338 | 36939366 | + | Bda033999 | Bda07g01952 | 10842 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda07g01952 | 134 | Gene3D | - | 1 | 85 | IPR036400 | - | |
| Bda07g01952 | 134 | PANTHER | CYTOCHROME B5 | 1 | 132 | - | - | |
| Bda07g01952 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 10 | 80 | IPR001199 | - | |
| Bda07g01952 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 4 | 94 | IPR036400 | - | |
| Bda07g01952 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
| Bda07g01952 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
| Bda07g01952 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
| Bda07g01952 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
| Bda07g01952 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037 | |
| Bda07g01952 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
| Bda07g01952 | 134 | PANTHER | CYTOCHROME B5-LIKE | 1 | 132 | - | - | |
| Bda07g01952 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda04g00888 | Bda-Chr4:58634581 | Bda07g01952 | Bda-Chr7:36938338 | 7.16E-12 | dispersed | |
| Bda07g01952 | Bda-Chr7:36938338 | Bda11g00353 | Bda-Chr11:3925250 | 1.28E-64 | dispersed | |
| Bda07g01952 | Bda-Chr7:36938338 | Bda13g00491 | Bda-Chr13:5773805 | 4.40E-67 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda07g01952 | K23490 | - | sind:105166769 | 252.292 |