Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01963 TTCATGGAAGAAGCACTGGTGCTATACCCTTCTCCAGGGATGGGGCATCTCGTCCCCATGGTTGAGTTGGGCAAGCTTATTCTCAAGCACCATCCTTTCTTCTCCGTCAAAATCCTCATCCTCGATCCTCCTTACTCCACTGGTTCGACCTCCGATTACGTATCCGCCATCTCCTTACCGTCTCTGACCTTCCACCACCTCCCCACTCTCTCTCTCCCTCCTTCTTCCTCTCCTCAAATGGTCGAAGATCTCGCCTACCAGCTTCCTCGCCTCAACAACCCCAATCTCCGCAGAACACTGGAGAAAATCTCGGAGACTGCCGTCGTTAGAGCTCTGATGATCGATTTCTTCAACGACGTCGCTTTGGAAGTCGCCGGAGATCTGAGAATACCCGCTTACTTTTTCTTCACATGCGGCGCCGGAAACCTGGCGGGCTTTCTGTCCTTACCCACTTTACACAAAATCACTACCGGAAATTTCAAAGACGAAAAGGTTGTATTCAACATCCCCGGCACACCTCCAATCCTCTCTTCCGATATGCCGACTCCTCTGCAAATTCGCAACACGAACTTATACAACAGTATGCTTAATACGGCAGTCCAATTTACTAAATCGAGAGGAATTTTGGTGAATACATTCACAGAGCTCGAATCAACAGCTATGGCGGCTTTAACGAACGGTATGTGCGTGATAGACTGTCCTACGCCGCCGATCTTCGCAGTCGGACCAATGATAGCGAGCAGCAACGGGGGAAAAGAAGAAGAACGACACGAATGCTTGAGGTGGCTGGATTCGCAGCCGAGCAAAAGCGTGGTGTTTCTTTGCTTCGGAAGTATGGGTTTGCATTCGGCGAAGCAGATAAGGGAGATGGCTATGGGGATCGAGAAAAGCGGGCATAGGTTCCTGTGGGTGGTCCGGTCACCGCCGGAAGAAGAAGAAGAAGAAGAAGGGAAGAGCCAGACGGTAAGGAGGCCGGAGCCGGAGTTGGAGAAACTATTACCGGAGGGATTTCTGTGTCAGACGAAAAGCAGGGGAATGGTGGTCAAGTCGTGGGCTCCGCAGGTGGCGGTGCTGAATCACGATGCCGTCGGCGGCTTTGTCTCCCACTGCGGTTGGAATTCTCTCATTGAAGCCATTTCTGCAGGCGTGCCACTTCTGGCATGGCCACTGTACGCAGAGCAGAGAATGAACAGAATAATTCTGGTGCAGCAGATGAAGATAGGGTTGTCTGTGAACGAGTCAGAAGACAGGTTTGTGACCGCCGCCGAGTTGGAAGAGCGAGTGAGGGAATTGATGGAGACGGAGAGAGGAAGAGAGGTGAGAGAGAGGGTTGAAAGGATGAGAGATGAAGCTGCTGCAGCAATGGAAGAAGACGGCTCGTCTGTCCTAGCACTGGCTCAGTGGGCTACGCTGCTGATGAAAGGCTCCCAATTTTAG 1437 51.91 FMEEALVLYPSPGMGHLVPMVELGKLILKHHPFFSVKILILDPPYSTGSTSDYVSAISLPSLTFHHLPTLSLPPSSSPQMVEDLAYQLPRLNNPNLRRTLEKISETAVVRALMIDFFNDVALEVAGDLRIPAYFFFTCGAGNLAGFLSLPTLHKITTGNFKDEKVVFNIPGTPPILSSDMPTPLQIRNTNLYNSMLNTAVQFTKSRGILVNTFTELESTAMAALTNGMCVIDCPTPPIFAVGPMIASSNGGKEEERHECLRWLDSQPSKSVVFLCFGSMGLHSAKQIREMAMGIEKSGHRFLWVVRSPPEEEEEEEGKSQTVRRPEPELEKLLPEGFLCQTKSRGMVVKSWAPQVAVLNHDAVGGFVSHCGWNSLIEAISAGVPLLAWPLYAEQRMNRIILVQQMKIGLSVNESEDRFVTAAELEERVRELMETERGREVRERVERMRDEAAAAMEEDGSSVLALAQWATLLMKGSQF 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 37060626 37062160 + Bda028949.1 Bda07g01963 10853

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01963 478 Coils Coil 437 457 - -
Bda07g01963 478 MobiDBLite consensus disorder prediction 306 326 - -
Bda07g01963 478 PANTHER GLYCOSYLTRANSFERASE 2 472 - -
Bda07g01963 478 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 212 435 IPR002213 GO:0008194
Bda07g01963 478 CDD GT1_Gtf-like 7 454 IPR002213 GO:0008194
Bda07g01963 478 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Bda07g01963 478 Gene3D Glycogen Phosphorylase B; 257 456 - -
Bda07g01963 478 Gene3D Glycogen Phosphorylase B; 7 461 - -
Bda07g01963 478 PANTHER GLYCOSYLTRANSFERASE 2 472 - -
Bda07g01963 478 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 474 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01963 - - K12938 oeu:111405618 477.248
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda05g00152 Bda07g01963 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01905 Bda-Chr7:36463931 Bda07g01963 Bda-Chr7:37060626 0 dispersed
Bda07g01909 Bda-Chr7:36517004 Bda07g01963 Bda-Chr7:37060626 0 dispersed
Bda07g01910 Bda-Chr7:36532352 Bda07g01963 Bda-Chr7:37060626 0 dispersed
Bda07g01963 Bda-Chr7:37060626 Bda10g00120 Bda-Chr10:2952239 7.22E-72 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g947 . . Bda05g00152 Bda07g01963 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone1ag1032 Cone5ag0740 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0015390 4 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 12