Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00037 | ATGGGTAAGGAAAAGGTCCACATCAACATTGTTGTCATTGGTCATGTCGACTCTGGAAAGTCTACCACCACCGGCCACCTTATCTACAAGCTTGGAGGTATTGACAAGCGTGTGATTGAGAGGTTCGAGAAAGAAGCTGCTGAAATGAACAAGAGGTCATTCAAGTATGCATGGGTTCTTGATAAGCTTAAGGCAGAGCGTGAGCGTGGTATTACTATTGATATTGCATTGTGGAAATTTGAGACCACCAAGTACTACTGCACTGTCATTGATGCTCCTGGACATCGAGACTTTATCAAGAACATGATTACTGGAACTTCCCAAGCAGATTGTGCTGTTCTCATTATCGATTCCACTACTGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGTCAGACCCGTGAACATGCCCTCCTTGCTTTCACTCTTGGAGTCAAGCAGATGATTTGCTGCTGCAACAAGATGGATGCCACCACACCCAAGTATTCTAAGGCCAGGTACGATGAAATTGTTAAAGAAGTGTCTTCTTACCTGAAGAAGGTTGGATACAACCCTGACAAAATCCCATTTGTTCCCATATCTGGGTTTGAGGGTGATAACATGATTGAGAGATCTACAAACCTTGATTGGTACAAGGGTCCTACCCTCCTCGATGCCCTTGACTTGATCCAGGAGCCCAAGAGGCCTTCAGACAAGCCTCTTCGACTGCCACTTCAGGATGTGTACAAGATTGGTGGTATTGGTACTGTCCCTGTTGGACGAGTTGAAACTGGTGTGCTGAAGCCTGGTATGGTGGTCACCTTTGGGCCAACTGGACTGACCACTGAAGTTAAGTCTGTTGAAATGCATCACGAGGCTCTACAAGAGGCCCTTCCTGGTGACAACGTTGGCTTCAACGTGAAGAATGTTGCAGTGAAAGATCTGAAGCGTGGTTTTGTTGCATCCAACTCCAAAGACGATCCAGCCAGGGAGGCTGCAAATTTCACATCGCAAGTCATTATCATGAACCACCCTGGACAAATTGGGAATGGTTATGCCCCAGTTCTTGATTGCCACACCTCTCACATTGCCGTCAAGTTTGCAGAGATATTGACCAAAATTGACAGGCGTTCTGGGAAAGAGCTTGAGAAGGAGCCCAAGTTTTTGAAGAATGGGGACGCTGGAATGGTTAAGATGATTCCCACCAAGCCCTATGGTGGTGGAGACATTCTCGGAGTATCCTCCGTTGGGTCGTTTTGCTGTCCGTGA | 1248 | 46.71 | MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPYGGGDILGVSSVGSFCCP | 415 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 299944 | 301883 | - | Bda024428.1 | Bda08g00037 | 10893 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00037 | 415 | TIGRFAM | EF-1_alpha: translation elongation factor EF-1, subunit alpha | 1 | 412 | IPR004539 | GO:0003746|GO:0005525|GO:0006414 | |
Bda08g00037 | 415 | Gene3D | Translation factors | 229 | 316 | - | - | |
Bda08g00037 | 415 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 61 | 76 | IPR031157 | - | |
Bda08g00037 | 415 | CDD | EF1_alpha_II | 230 | 320 | - | - | |
Bda08g00037 | 415 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 230 | IPR000795 | GO:0003924|GO:0005525 | |
Bda08g00037 | 415 | PANTHER | ELONGATION FACTOR 1-ALPHA-LIKE | 1 | 398 | - | - | |
Bda08g00037 | 415 | Pfam | Elongation factor Tu GTP binding domain | 6 | 221 | IPR000795 | GO:0003924|GO:0005525 | |
Bda08g00037 | 415 | Gene3D | - | 1 | 226 | IPR027417 | - | |
Bda08g00037 | 415 | CDD | EF1_alpha_III | 323 | 397 | - | - | |
Bda08g00037 | 415 | Pfam | Elongation factor Tu domain 2 | 248 | 313 | IPR004161 | GO:0005525 | |
Bda08g00037 | 415 | CDD | EF1_alpha | 9 | 227 | - | - | |
Bda08g00037 | 415 | Gene3D | Translation factors | 323 | 399 | - | - | |
Bda08g00037 | 415 | PANTHER | TRANSLATION FACTOR | 1 | 398 | - | - | |
Bda08g00037 | 415 | SUPERFAMILY | Translation proteins | 231 | 360 | IPR009000 | - | |
Bda08g00037 | 415 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 249 | IPR027417 | - | |
Bda08g00037 | 415 | PRINTS | GTP-binding elongation factor signature | 88 | 98 | IPR000795 | GO:0003924|GO:0005525 | |
Bda08g00037 | 415 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924|GO:0005525 | |
Bda08g00037 | 415 | PRINTS | GTP-binding elongation factor signature | 68 | 76 | IPR000795 | GO:0003924|GO:0005525 | |
Bda08g00037 | 415 | PRINTS | GTP-binding elongation factor signature | 104 | 115 | IPR000795 | GO:0003924|GO:0005525 | |
Bda08g00037 | 415 | PRINTS | GTP-binding elongation factor signature | 148 | 157 | IPR000795 | GO:0003924|GO:0005525 | |
Bda08g00037 | 415 | Pfam | Elongation factor Tu C-terminal domain | 322 | 397 | IPR004160 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00037 | Bda-Chr8:299944 | Bda09g01471 | Bda-Chr9:46517877 | 0 | dispersed | |
Bda11g00347 | Bda-Chr11:3873899 | Bda08g00037 | Bda-Chr8:299944 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00037 | K03231 | - | dct:110098184 | 801.201 |