Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00061 | ATGGAAAGGTTGTTTCTGATGGATGAGGAATGCAATGCTGCACCAATTACCTGGAATTACTCATCGTTTGACGTGGATTTCCAGAAATACGACCTGAATTCTGCGTCTGACCAGCTTCAGAACAGTTTTTCGGGTGCGGATTGGGAAAATTCGGTTGAACTGTGTGATCCTCTTGAGTCTGCTTTGAGCTCCATTGTTTCTTCTCCGGCGGCGTCCAATGTCGGCGCTAGCTTTAATTCCGGTGGAGATAAACTAATTGTTAGGGAACTAATAGGGAGGCTGGGAAGCATTTGCGAAGTCGGCGACATTCCAACGCTGGAGTGCATTGGGGGAAAGAAGGACAATACTGATCCCTCGTATGACAGTACGCCATTAAATTCTCCTCCGAAGCTCAATCTGTCAGTGGAAATTCGAGAAGCCAAAGGTCATTCGTCATTTTTTGATAGCAATGTTCTAATCCATTCAAGCTTGAAGCCATTTTCTTCGGACCCTGAGTTTGCTGCGAGAGCTGCTACGTTTTCATCCTTAGCCGCTACAAATGGAGGTCTAAGTAAAGAGATTCCAACGATTCCTGTTATCGAAACTCGAATTGCTGTTCAAGAGCACAGAAAAAGCTCGATTCAGTGTAGAACTTCACTTAGTACGAAATCAAGAAAGTTGTCGAGATCTCTTGGCCGTGAAAATGCAGAGATGGGCGACTCTCGAGAAGGATCTTCTTTGTCTGAGCAAATCTCCTGCAGGGAATCGGCCATGAAAGGGAAAGATGAAGTTGATCTGAACCACAGAAAAAGAAAATTGATTTCAAATGTTAACTCAGAAGAAAAACCACCTCCTTCCTCGGCTAAAATCGCCAAGGTTGAAGGTAGAAACGACGGACCAAATCCAGGCGAAACTTCTGCAAGAAAAAATGATGGAACAAAGACGAAGACAGAAGCAAATGAAGGTAAAAAATCAGGAGAAGATGAAAATCAGAAGAGTACAAAGCTTCCGGAGCCTCCAAAGGATTATATCCATGTCAGAGCAAGAAGAGGTCAAGCTACAGACAGCCATAGTCTCGCAGAGAGAGTTAGAAGAGAAAAAATCAGCGGAAGGATGAAGTTTCTACAAGATCTTGTCCCTGGTTTGAATAAGGTGACAGGAAAAGCAGTGATGCTTGATGAAATTATAAATTATGTTCAATCATTACAACGCCAGGTTGAGTTTCTTTCAATGAAGCTGGCATCAGTTCCTCCAAGTATGAATCTGAACAATGAAGCTCTTCTATCCAAAGATATCATTCAATCTTGTGTATCTTCACAACATATTATAAACCCACTGGACTCCTCTTTAGCGGCATTCGAGATCGGCTGCCAGAGTGTTCCTTCTGAGACAGAGATCCCATACCCAGTAAACTCTTTAAATGCATTTCTCTGCAGAAACCCAGACATTCAAACGATTCATCTTGATGGATACAGTAAAGATGATGATCAACAAGTCTTATCATGCTGGGAAGATGACCTTCAAAGTGTAGTTCAGATGGGTTTTGGACAAAATCAGCAGCAAAACTCGAGATGTTAG | 1557 | 42.65 | MERLFLMDEECNAAPITWNYSSFDVDFQKYDLNSASDQLQNSFSGADWENSVELCDPLESALSSIVSSPAASNVGASFNSGGDKLIVRELIGRLGSICEVGDIPTLECIGGKKDNTDPSYDSTPLNSPPKLNLSVEIREAKGHSSFFDSNVLIHSSLKPFSSDPEFAARAATFSSLAATNGGLSKEIPTIPVIETRIAVQEHRKSSIQCRTSLSTKSRKLSRSLGRENAEMGDSREGSSLSEQISCRESAMKGKDEVDLNHRKRKLISNVNSEEKPPPSSAKIAKVEGRNDGPNPGETSARKNDGTKTKTEANEGKKSGEDENQKSTKLPEPPKDYIHVRARRGQATDSHSLAERVRREKISGRMKFLQDLVPGLNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVPPSMNLNNEALLSKDIIQSCVSSQHIINPLDSSLAAFEIGCQSVPSETEIPYPVNSLNAFLCRNPDIQTIHLDGYSKDDDQQVLSCWEDDLQSVVQMGFGQNQQQNSRC | 518 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 491731 | 493834 | - | Bda024452.1 | Bda08g00061 | 10917 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00061 | 518 | PANTHER | TRANSCRIPTION FACTOR BHLH78-LIKE ISOFORM X1 | 49 | 514 | - | - | |
Bda08g00061 | 518 | SMART | finulus | 351 | 401 | IPR011598 | GO:0046983 | |
Bda08g00061 | 518 | Pfam | Helix-loop-helix DNA-binding domain | 349 | 396 | IPR011598 | GO:0046983 | |
Bda08g00061 | 518 | Gene3D | - | 342 | 416 | IPR036638 | GO:0046983 | |
Bda08g00061 | 518 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 49 | 514 | IPR024097 | GO:0006355 | |
Bda08g00061 | 518 | CDD | bHLH_AtBPE_like | 335 | 420 | - | - | |
Bda08g00061 | 518 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 343 | 412 | IPR036638 | GO:0046983 | |
Bda08g00061 | 518 | MobiDBLite | consensus disorder prediction | 208 | 335 | - | - | |
Bda08g00061 | 518 | MobiDBLite | consensus disorder prediction | 302 | 335 | - | - | |
Bda08g00061 | 518 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 345 | 395 | IPR011598 | GO:0046983 | |
Bda08g00061 | 518 | MobiDBLite | consensus disorder prediction | 248 | 270 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00061 | Bda-Chr8:491731 | Bda13g00303 | Bda-Chr13:3849368 | 9.41E-91 | dispersed | |
Bda15g00591 | Bda-Chr15:9105510 | Bda08g00061 | Bda-Chr8:491731 | 4.05E-43 | dispersed | |
Bda08g00061 | Bda-Chr8:491731 | Bda03g01075 | Bda-Chr3:10797734 | 1.05E-143 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16222 | PF00010 | HLH | 4.00E-05 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00061 | - | - | tcc:18602600 | 429.098 |