Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00075 ATGAACTCTCTCTCTCTCTCTCTCTCTCTTGTGTCTAAATTCTGGAAGTTCCATGGCAGGTGGAGAAGCTCAAATTCAGAGAAGAACAAAGTCAAAGCGAGGAGGAAGCTGAGAGAGCCGAGGTTCTGTTTTCAGACAAGAAGCGATGTGGATGTGCTAGACGACGGCTACAAATGGCGGAAATACGGCCAAAAAGTTGTCAAAAACAGCCTTCATCCAAGAGGTTACTATCGATGTACGTACAATTCTTGTAGAGTGAAGAAAAGAGTCGAACGACTATCAGAAGACTGCCGGATGGTGATAACAACGTACGAAGGAAGACATAACCACTCTCCTTGCGATGAGTCGAACTCATCTGAACCCGAATGTTTCTAA 375 44.8 MNSLSLSLSLVSKFWKFHGRWRSSNSEKNKVKARRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRGYYRCTYNSCRVKKRVERLSEDCRMVITTYEGRHNHSPCDESNSSEPECF 124
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 701243 701935 + Bda024474.1 Bda08g00075 10931
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00075 124 ProSiteProfiles WRKY domain profile. 48 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda08g00075 124 SUPERFAMILY WRKY DNA-binding domain 45 111 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda08g00075 124 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 23 123 - -
Bda08g00075 124 Gene3D WRKY domain 38 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda08g00075 124 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 123 IPR044810 GO:0003700
Bda08g00075 124 Pfam WRKY DNA -binding domain 54 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda08g00075 124 SMART WRKY_cls 53 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bda08g00075 Bda11g00335 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00075 Bda-Chr8:701243 Bda11g01345 Bda-Chr11:15001434 6.71E-49 dispersed
Bda08g00075 Bda-Chr8:701243 Bda09g01561 Bda-Chr9:47169033 3.72E-17 transposed
Bda08g00075 Bda-Chr8:701243 Bda11g00494 Bda-Chr11:5270703 9.62E-35 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16224 PF03106 WRKY 6.10E-24 CL0274 Bda TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00075 - - jre:109016788 213.001