Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00075 | ATGAACTCTCTCTCTCTCTCTCTCTCTCTTGTGTCTAAATTCTGGAAGTTCCATGGCAGGTGGAGAAGCTCAAATTCAGAGAAGAACAAAGTCAAAGCGAGGAGGAAGCTGAGAGAGCCGAGGTTCTGTTTTCAGACAAGAAGCGATGTGGATGTGCTAGACGACGGCTACAAATGGCGGAAATACGGCCAAAAAGTTGTCAAAAACAGCCTTCATCCAAGAGGTTACTATCGATGTACGTACAATTCTTGTAGAGTGAAGAAAAGAGTCGAACGACTATCAGAAGACTGCCGGATGGTGATAACAACGTACGAAGGAAGACATAACCACTCTCCTTGCGATGAGTCGAACTCATCTGAACCCGAATGTTTCTAA | 375 | 44.8 | MNSLSLSLSLVSKFWKFHGRWRSSNSEKNKVKARRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRGYYRCTYNSCRVKKRVERLSEDCRMVITTYEGRHNHSPCDESNSSEPECF | 124 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 701243 | 701935 | + | Bda024474.1 | Bda08g00075 | 10931 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00075 | 124 | ProSiteProfiles | WRKY domain profile. | 48 | 110 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda08g00075 | 124 | SUPERFAMILY | WRKY DNA-binding domain | 45 | 111 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda08g00075 | 124 | PANTHER | WRKY TRANSCRIPTION FACTOR 12-RELATED | 23 | 123 | - | - | |
Bda08g00075 | 124 | Gene3D | WRKY domain | 38 | 113 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda08g00075 | 124 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 23 | 123 | IPR044810 | GO:0003700 | |
Bda08g00075 | 124 | Pfam | WRKY DNA -binding domain | 54 | 110 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda08g00075 | 124 | SMART | WRKY_cls | 53 | 112 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda08g00075 | Bda11g00335 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00075 | Bda-Chr8:701243 | Bda11g01345 | Bda-Chr11:15001434 | 6.71E-49 | dispersed | |
Bda08g00075 | Bda-Chr8:701243 | Bda09g01561 | Bda-Chr9:47169033 | 3.72E-17 | transposed | |
Bda08g00075 | Bda-Chr8:701243 | Bda11g00494 | Bda-Chr11:5270703 | 9.62E-35 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16224 | PF03106 | WRKY | 6.10E-24 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00075 | - | - | jre:109016788 | 213.001 |