Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bda08g00075	ATGAACTCTCTCTCTCTCTCTCTCTCTCTTGTGTCTAAATTCTGGAAGTTCCATGGCAGGTGGAGAAGCTCAAATTCAGAGAAGAACAAAGTCAAAGCGAGGAGGAAGCTGAGAGAGCCGAGGTTCTGTTTTCAGACAAGAAGCGATGTGGATGTGCTAGACGACGGCTACAAATGGCGGAAATACGGCCAAAAAGTTGTCAAAAACAGCCTTCATCCAAGAGGTTACTATCGATGTACGTACAATTCTTGTAGAGTGAAGAAAAGAGTCGAACGACTATCAGAAGACTGCCGGATGGTGATAACAACGTACGAAGGAAGACATAACCACTCTCCTTGCGATGAGTCGAACTCATCTGAACCCGAATGTTTCTAA	375	44.8	MNSLSLSLSLVSKFWKFHGRWRSSNSEKNKVKARRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRGYYRCTYNSCRVKKRVERLSEDCRMVITTYEGRHNHSPCDESNSSEPECF	124

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
8	701243	701935	+	Bda024474.1	Bda08g00075	10931

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bda08g00075	124	ProSiteProfiles	WRKY domain profile.	48	110	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bda08g00075	124	SUPERFAMILY	WRKY DNA-binding domain	45	111	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bda08g00075	124	PANTHER	WRKY TRANSCRIPTION FACTOR 12-RELATED	23	123	-	-
	Bda08g00075	124	Gene3D	WRKY domain	38	113	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bda08g00075	124	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	23	123	IPR044810	GO:0003700
	Bda08g00075	124	Pfam	WRKY DNA -binding domain	54	110	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bda08g00075	124	SMART	WRKY_cls	53	112	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Bda08g00075	Bda11g00335	CCT

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Bda08g00075	Bda-Chr8:701243	Bda11g01345	Bda-Chr11:15001434	6.71E-49	dispersed
	Bda08g00075	Bda-Chr8:701243	Bda09g01561	Bda-Chr9:47169033	3.72E-17	transposed
	Bda08g00075	Bda-Chr8:701243	Bda11g00494	Bda-Chr11:5270703	9.62E-35	transposed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	16224	PF03106	WRKY	6.10E-24	CL0274	Bda	TF

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bda08g00075	-		-	jre:109016788	213.001