Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00081 ATGGAAATGAAGCTGGAGAAGAGCAAAGAGGAAGTGGAAGAAGTGGAGGACGACGGTTGCCGTACGGAGGTTGTCAGGTGGGAGAGGTTTCTTCCCAGGATGGCGCTGAGAGTTCTTCTTGTTGAAGCTGATGATTCCACGCGTCGGATAATTTCAGCGCTTCTCCGTAAATGCAGCTATAGAGTTACTGCTGTTTCTGATGGACTACAGGCGTGGGAAACTATAAGGGTTAAACCTCAGAGTATAGATATAATAATGACGGAGGTGGATTTGCCATCAATATCCGGATATGCTCTCCTTACTCTAGTGATGGAACATGAAGTTTGCAAAAACATTCCGGTTATAATGATGTCCTCTCAAGATTCAGTTAGCACGGTCTTCAAGTACATGTTGAGAGGCGCTGTTGACTTTCTTGTTAAACCTCTTAGGAGCAATGAGCTGAGGAACCTATGGCAGCATGTTTGGAGGAGGCAGAGTCATGGTGCCGATAATACCTGTAAAGCTGTGGCATCTCTCGAGAATAATGCAGTGAGCAATTATTCAAGCGATCTTGCATCATCCAGACAGAAACAGAAGGAATGCAGTGAGAAGGAGGGCGATACTCAAAGCTCATGTACAATGCCTCATGTGGAAGCTGAGAGTGCATACGCTCAAAACATGCAGGGCTTTGCCAATTTAAAGAGTCGAAGTTCCTCTATTTTGAGCAACACTGGAGAGCCAGAGCATGATCATAGTGGTGTTATGGAAGGCAGAACTGGAGGTGTGTTGGTCATTATTACAGAAAATTTACACGCTATAGGATCAGAATTTCAATCCTGTCATGAAGTCTATTTTGCTACTCCTTTGAGACGGAAAGAAAACTTGGATTCCATCCAAGGAATTAATAAAGAAGGCCATGCAGGATCTGATAGGCATACAGATAAGGAAATTCTCGCTGGTGGAATTAATAGTTGTGATGATGAATGCAATGAACTTTCCTCTAGAGCCATTGATCTGATAGCGACAATAGATTTTAAACAGAAGTGCATGGAAGGAGTATTCAATTATGAAAAAATCCAATCTGCTCCAAAATTGGAACTTTCTTTGAGGCGGACGCATCCAAGTTCATATACCCAAGGGACTGATGAAATGAAATCACTGAACCATTCTAATGCTTCAGCATTTTCATTGTATACTGGTAGTAAGACATGGCAGCCTCCTCTTCATATCATATCTACTGATTCTCATAAATCGGAAGATGGACCTGAACCATCCTCGAGTAAAATCACTCGAGATGAATGTACTTATTCAAAGCACCGTACAAGTAATAAAGGAAATGCAGAAAACCGAGAATCTAATAATTCAGTCCCTGGCCTTGATTTTGATAATGTAGGTGCTGGATACAATCACGCAGTTCAATCCAGTTTTTTTGCTCAATATGGTTTATCCACTGGGTGGAATACCAGACAAACCAGTGAGCAAGGGCAACCCCTATTTACCATGGGAGTCCTTAAACAGCCCAATCCTGAAAAAAGCATAAAACAGGTTTATCTTCAATCACCCAATACTATAAGGAACTCGATGGAGCAGACTGAGCCTGAAAAGAATGTAATAAAGCCTTCAGAAACACCTAGACACGATTCTCCTGCTCCACCTCGTAGTACAAGCAGTACTTTATGTAATGAAACTTCAGATCACAATTGGCAGGAGGCAGTTGAGATGGCTGCTGCAAAGGTTGAGGGTTTAAACGACATTGGTTTTAAAGGGCCTCACTCTGGCTCTCACTTCATGAGCCAGAGGGAAGCAGCTTTAACCAAGTTCCGATTGAAGCGTAAAGATCGATGCTACGAAAAAAAGGTTCGATATCAAAGCCGGAAAAGATTGGCCGAGCAGCGGCCGAGAGTAAAGGGGCAGTTTGTGCGACAAATAAAGGCAGACCCACCAATCACTGAAGCAAGATGTTCATGA 1947 42.84 MEMKLEKSKEEVEEVEDDGCRTEVVRWERFLPRMALRVLLVEADDSTRRIISALLRKCSYRVTAVSDGLQAWETIRVKPQSIDIIMTEVDLPSISGYALLTLVMEHEVCKNIPVIMMSSQDSVSTVFKYMLRGAVDFLVKPLRSNELRNLWQHVWRRQSHGADNTCKAVASLENNAVSNYSSDLASSRQKQKECSEKEGDTQSSCTMPHVEAESAYAQNMQGFANLKSRSSSILSNTGEPEHDHSGVMEGRTGGVLVIITENLHAIGSEFQSCHEVYFATPLRRKENLDSIQGINKEGHAGSDRHTDKEILAGGINSCDDECNELSSRAIDLIATIDFKQKCMEGVFNYEKIQSAPKLELSLRRTHPSSYTQGTDEMKSLNHSNASAFSLYTGSKTWQPPLHIISTDSHKSEDGPEPSSSKITRDECTYSKHRTSNKGNAENRESNNSVPGLDFDNVGAGYNHAVQSSFFAQYGLSTGWNTRQTSEQGQPLFTMGVLKQPNPEKSIKQVYLQSPNTIRNSMEQTEPEKNVIKPSETPRHDSPAPPRSTSSTLCNETSDHNWQEAVEMAAAKVEGLNDIGFKGPHSGSHFMSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQIKADPPITEARCS 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 750110 754167 - Bda024482.1 Bda08g00081 10937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00081 648 MobiDBLite consensus disorder prediction 404 451 - -
Bda08g00081 648 Pfam CCT motif 593 635 IPR010402 GO:0005515
Bda08g00081 648 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 6 626 - -
Bda08g00081 648 SMART REC_2 36 151 IPR001789 GO:0000160
Bda08g00081 648 MobiDBLite consensus disorder prediction 406 439 - -
Bda08g00081 648 ProSiteProfiles Response regulatory domain profile. 37 155 IPR001789 GO:0000160
Bda08g00081 648 MobiDBLite consensus disorder prediction 181 206 - -
Bda08g00081 648 MobiDBLite consensus disorder prediction 541 555 - -
Bda08g00081 648 SUPERFAMILY CheY-like 36 161 IPR011006 -
Bda08g00081 648 CDD psREC_PRR 38 141 - -
Bda08g00081 648 ProSiteProfiles CCT domain profile. 593 635 IPR010402 GO:0005515
Bda08g00081 648 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 626 IPR045279 GO:0009736
Bda08g00081 648 MobiDBLite consensus disorder prediction 516 555 - -
Bda08g00081 648 Pfam Response regulator receiver domain 38 149 IPR001789 GO:0000160
Bda08g00081 648 Gene3D - 34 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00081 Bda-Chr8:750110 Bda14g00095 Bda-Chr14:684443 3.52E-54 dispersed
Bda07g01959 Bda-Chr7:36961945 Bda08g00081 Bda-Chr8:750110 7.59E-111 transposed
Bda11g00187 Bda-Chr11:2406265 Bda08g00081 Bda-Chr8:750110 2.61E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16227 PF00072 Response_reg 7.30E-19 CL0304 Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00081 K12130 - qsu:112004762 512.686