Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00119 ATGGGGACCAATGAAAATGGAAAGTCTTCTAGGTCAGAAAAGCTATCTTCGCCTGCAAAACTGACCAAGCTGACTAATCCAACCAATGATCATGTACATCATGATTGGGCAGCCATTCAGGCGCATTACGGTCCGAGAGTTGCTATTCCACCGTATTACCACTACATTTGGGGCCCTCAACAGCCCATTGTGGCACCTTATGGGACACCCTACGCAGATTATGCGCATCCTGCTGTTTATGCACATCCTGCTGTTTATGCGCATCCTGCTGTTTCTTTCATTGCTGCAACTCCTTTGAGCACGGAAACACCGGCCAAGTCAGCCGAAAATGGCGACAAAGGTTTGATGAAGAAATTGAAAAGTTTTGATGGCCTGGCAATGTCTCTAGGCAATGGTGGCACAGAGATCAGAGACAGCGAAGCCGAAGACACGATGTCGATGAGTGTGGAGACTGGAGGTTCTAGCAATGGAAGTGGTGGAAATTTAGCTGTGACGAATCGAATGAGAAAAAAAAGAAGCCGCGAGGGAACGCCCATGACAGGCACCTACAAGGAAACCGAAACTCCGGCCAATCCATCATCTGATAAGAAGGTGAAAGAAGAAAATGTCTGTGCTAGTTTGTCTAAACAATTGTTCGGACCTGTTATTTCGCCTGCCATAGCCAAGGCTGTAGAGCTAACCAGCCCTTCCGGCCTAAATCCGCCCTCGGAACACTGGTCACAGAACGAGAAAGAGCTAAAGCGGGAAAAGAGGAAACAATCGAACCGAGAATCTGCGAGAAGATCGAGGTTGAGGAAACAGGCTGAAGCCGAAGAACTAGGACAAAAAGTTGAATTCCTGATCGCAGAGAACATGTTGATAAAATCTGAAATAAGTCAACTTGCAGAGAAATCCAAGAAACTTAAGCTAGAAAACGCTTCCCTAATGGGGAGACTAAACAAAACAAACCAAGGAGGAAGCAAAGAATTACTCCTAAACATCATCAACGAGAAGCAAGAAGAGCTTGTTTGTACTGAGAACTTGCTTCCAAGAGTTAACCATTCCGATTCCGTCAATACAAACACAAAAGAAGAATGTGAAATTTGCCCGAAAATCTCAAACCTGGGTCCGAAACTGCATCAACTCTTGGATTCGAGTTTAAGAACGGATGCTGTGGCAGCCAGCTGA 1167 45.76 MGTNENGKSSRSEKLSSPAKLTKLTNPTNDHVHHDWAAIQAHYGPRVAIPPYYHYIWGPQQPIVAPYGTPYADYAHPAVYAHPAVYAHPAVSFIAATPLSTETPAKSAENGDKGLMKKLKSFDGLAMSLGNGGTEIRDSEAEDTMSMSVETGGSSNGSGGNLAVTNRMRKKRSREGTPMTGTYKETETPANPSSDKKVKEENVCASLSKQLFGPVISPAIAKAVELTSPSGLNPPSEHWSQNEKELKREKRKQSNRESARRSRLRKQAEAEELGQKVEFLIAENMLIKSEISQLAEKSKKLKLENASLMGRLNKTNQGGSKELLLNIINEKQEELVCTENLLPRVNHSDSVNTNTKEECEICPKISNLGPKLHQLLDSSLRTDAVAAS 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1014806 1017359 - Bda024523.1 Bda08g00119 10975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00119 388 MobiDBLite consensus disorder prediction 227 269 - -
Bda08g00119 388 SUPERFAMILY Leucine zipper domain 246 302 IPR046347 GO:0003700|GO:0006355
Bda08g00119 388 Gene3D - 246 317 - -
Bda08g00119 388 SMART brlzneu 243 307 IPR004827 GO:0003700|GO:0006355
Bda08g00119 388 MobiDBLite consensus disorder prediction 147 163 - -
Bda08g00119 388 Pfam bZIP transcription factor 243 305 IPR004827 GO:0003700|GO:0006355
Bda08g00119 388 MobiDBLite consensus disorder prediction 240 269 - -
Bda08g00119 388 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 388 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bda08g00119 388 Pfam Disordered region downstream of MFMR 112 231 - -
Bda08g00119 388 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Bda08g00119 388 PANTHER G-BOX-BINDING FACTOR 3 1 388 - -
Bda08g00119 388 MobiDBLite consensus disorder prediction 1 26 - -
Bda08g00119 388 Pfam G-box binding protein MFMR 1 91 IPR012900 -
Bda08g00119 388 MobiDBLite consensus disorder prediction 1 27 - -
Bda08g00119 388 MobiDBLite consensus disorder prediction 147 201 - -
Bda08g00119 388 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 308 IPR004827 GO:0003700|GO:0006355
Bda08g00119 388 CDD bZIP_plant_GBF1 248 297 IPR045314 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00119 Bda11g00226 CCT
Bda08g00119 Bda11g00226 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00119 Bda-Chr8:1014806 Bda10g00121 Bda-Chr10:3166845 6.49E-42 dispersed
Bda03g01002 Bda-Chr3:9155968 Bda08g00119 Bda-Chr8:1014806 1.16E-142 transposed
Bda11g00226 Bda-Chr11:2763032 Bda08g00119 Bda-Chr8:1014806 4.46E-111 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16236 PF16596 MFMR_assoc 1.00E-12 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00119 K09060 - jre:108996456 374.4