Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00146 ATGTCTCAATCAGATCAATCTCCTCATTTCGACAGACCCAGATTGCCGATCAAGAAGGTTTTAGCTAAGCTTCAGGGGGAGGGAGATGGTGCTGTTGTTAGGAGAGGCATTGGAAGGAGTGATTTGAAGAACTTGGATCCTTTCCTCATGTTGGATGATTTCTCAGTGGGTCCCCCTGCTGGATTTCCAGATCATCCACACAGAGAAAGTAAATTTCATTCTTGTGAATTGCAGGGAGGGATTACTCATCAAGACTTTGCAGGGCACAAGGGCACAATATGGACTGGAGATGTGCAGTGGATGACTGCGGGGAGAGGGATTATTCACTCTGAAATGCCTGCCAGTGAAGGTGCCCAAACCGGTTTGCAGCTTTGGATCAACTTATCGTCCGAAGACAAACTGGTCGAACCGAGATACCAAGAGCTTCTGAGCAAAGACATCCCGAGAGCGGAGAAAGACGGAGTTGAAGTCCGAGTTATCGCCGGAGAATCGATGGGAGTCCGGTCTCCGGTCTACACTAGAACTCCGACGATGTACCTCGATTTCACTCTAAAACCAAGGGCTCAGATGCATCAGAAAATCCCAGAATCCTGGAACTCGTTCGTGTATATAATCGAAGGAGAGGGTGTCTTTGGAGCCCCAAATTCATCGACCGTAGCAGCTCATCACGTTCTTGTTCTGGGCATTGGAGACGGTCTGAGTGTGTGGAATCGATCTTCGAAGACTCTGAGATTCGTGTTGATTGCAGGGCAGCCATTGAATGAGACCGTGGTTCAGTATGGACCTTTTGTGATGAACACTCAGGCTGAGATTGATCAAGCCATTGAAGACTACCATTACTGCAAAAATGGGTTTGAATTGGCCAAGTATTGGAGATCTCAA 882 47.73 MSQSDQSPHFDRPRLPIKKVLAKLQGEGDGAVVRRGIGRSDLKNLDPFLMLDDFSVGPPAGFPDHPHRESKFHSCELQGGITHQDFAGHKGTIWTGDVQWMTAGRGIIHSEMPASEGAQTGLQLWINLSSEDKLVEPRYQELLSKDIPRAEKDGVEVRVIAGESMGVRSPVYTRTPTMYLDFTLKPRAQMHQKIPESWNSFVYIIEGEGVFGAPNSSTVAAHHVLVLGIGDGLSVWNRSSKTLRFVLIAGQPLNETVVQYGPFVMNTQAEIDQAIEDYHYCKNGFELAKYWRSQ 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1369530 1371246 + Bda033792 Bda08g00146 11002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00146 294 CDD cupin_pirin_N 31 128 - -
Bda08g00146 294 Gene3D Jelly Rolls 148 253 IPR014710 -
Bda08g00146 294 PIRSF Pirin 12 292 IPR012093 -
Bda08g00146 294 PANTHER PIRIN-LIKE PROTEIN 5 294 - -
Bda08g00146 294 SUPERFAMILY RmlC-like cupins 16 292 IPR011051 -
Bda08g00146 294 CDD cupin_pirin_C 176 252 - -
Bda08g00146 294 Pfam Pirin 34 126 IPR003829 -
Bda08g00146 294 Pfam Pirin C-terminal cupin domain 179 284 IPR008778 -
Bda08g00146 294 PANTHER PIRIN-RELATED 5 294 IPR012093 -
Bda08g00146 294 Gene3D Jelly Rolls 27 279 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00146 Bda-Chr8:1369530 Bda13g00758 Bda-Chr13:9166726 3.38E-34 dispersed
Bda04g01258 Bda-Chr4:63132077 Bda08g00146 Bda-Chr8:1369530 6.02E-40 transposed
Bda03g00986 Bda-Chr3:8923167 Bda08g00146 Bda-Chr8:1369530 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00146 K06911 - pop:7468491 506.908