Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00197 ATGTTCGCTTTCAATCTCGGTCCATCTCCCGCGCTCCTTTCTTCCAATCGTACTGGTAACTACGCCATTAATGCATCTTCCTTTCTTAATCCAAATCTTCTTCACAGAGCTCAACAATCCCTTGGAAACACTCATTCTCCATCTGCGCCTAACTTCAGCAAAATCCATGGCTGCCTCCCACTTGGATTTTCTCATCGTTCATCGTCTCAGATTGTGAATCCCACCGCTAATTTAAAGCATTTGAGCGAAATCTGCTCCCTCCCATTTGGGATTTCTCCGAAACCGAGAGTTTATGTTCCCAGAGCCTCATCTGAATCGAGTCCCGGAAGTGAAGAAGCCGAGATTTCGAAATCGAAGAGCAAGACATATCAGCTAGCAATCGTTTTTGGTCTCTGGTACTTCCAAAATATTGTGTTTAATATCTACAACAAGAAGGTACTAAATCTTTTCCCATTTCCATGGCTACTTGCTTCTTTCCAGCTCTTCGTTGGGTCTGTTTGGATGCTCATTCTCTGGTCTTTTAAGCTCCAACCATGTCCAAAAATATCAAAAAATTTTATTATTGCCCTACTTGGTCCTGCGTTGTTCCACACCATTGGTCACATTTCAGCTTGTGTTTCATTCTCTAAGGTGGCTGTTTCTTTCACCCATGTTATCAAATCTTCCGAACCCGTTTTCTCTGTCGTGTTTTCATCGTTACTTGGTGATACTTATCCCATACAAGTATGGCTTTCGATCCTTCCCATTGTTTTGGGTTGCTCTCTGGCTGCCATTACTGAAGTTTCCTTCAATTTCCAAGGTCTATGGGGTGCTTTGATCAGCAATGTCGGGTTCGTATTTAGAAATATTTACTCAAAAAGAAGTTTGGAGAGCTTCAAAGAAGTAAATGGGTTGAATTTATATGGTTGGATCAGTATAATATCATTGCTATATCTATTTCCTGTGGCTATTTTCGTTGAAGGGTCCCAATGGCTCCAAGGATATCACCAAGCAATTGCAGCCGTGGGAAAACCATCCACATTATACACTTGGGTTATGCTTTCTGGGGTGTTTTATCATCTTTATAACCAATCTTCGTACCAAGCTCTCGACGAGATTAGCCCCTTGACGTTTTCAGTCGGAAACACGATGAAAAGAGTAGTCGTCATTGTATCGACCGTTTTGGTATTCAGGAATCCGGTTAGACCTCTGAATGCTCTTGGCTCTGCCATTGCCATTTTGGGAACTTTCTTGTATTCGCAGGCCACTTCGAAGAAGAAGAAAGGCGATGAGAAGAAGAACTGA 1284 42.29 MFAFNLGPSPALLSSNRTGNYAINASSFLNPNLLHRAQQSLGNTHSPSAPNFSKIHGCLPLGFSHRSSSQIVNPTANLKHLSEICSLPFGISPKPRVYVPRASSESSPGSEEAEISKSKSKTYQLAIVFGLWYFQNIVFNIYNKKVLNLFPFPWLLASFQLFVGSVWMLILWSFKLQPCPKISKNFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSSEPVFSVVFSSLLGDTYPIQVWLSILPIVLGCSLAAITEVSFNFQGLWGALISNVGFVFRNIYSKRSLESFKEVNGLNLYGWISIISLLYLFPVAIFVEGSQWLQGYHQAIAAVGKPSTLYTWVMLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSTVLVFRNPVRPLNALGSAIAILGTFLYSQATSKKKKGDEKKN 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1801806 1803089 + Bda024610.1 Bda08g00197 11053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00197 427 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 124 422 IPR004696 GO:0016021|GO:0022857|GO:0055085
Bda08g00197 427 Pfam Triose-phosphate Transporter family 124 413 IPR004853 -
Bda08g00197 427 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 60 422 - -
Bda08g00197 427 PANTHER SOLUTE CARRIER FAMILY 35 60 422 - -
Bda08g00197 427 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 416 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00346 Bda-Chr7:4504625 Bda08g00197 Bda-Chr8:1801806 8.80E-62 dispersed
Bda08g00197 Bda-Chr8:1801806 Bda08g00208 Bda-Chr8:1877223 0 dispersed
Bda08g00197 Bda-Chr8:1801806 Bda09g00389 Bda-Chr9:4950552 1.56E-102 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00197 K15283 - qsu:111998150 613.609