Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00217 ATGAGTGGTGGAGAAGAAGTAGAGACAAACTTAGAGTTCACTCCGACATGGGTGGTTGCCGCGGTCTGTACTGTAATCGTCGCCATTTCCCTCGCCGTAGAGCGGCTTATTCACTACACCGGAAAATACCTCAAGAGGAAGAATCAGAAGCCTCTATTCGAAGCTTTACTGAAAATTAAGGAAGAATTGATGCTTTTGGGGTTTATCTCGCTTCTTCTCACGGTATTTCAGAGCACCATTACTAAGTTTTGCGTCCACGAGGGTTTGACGCAGAATCTGCTCCCTTGTAAACTTAGTGACAGGGGTGAAGGAGAACAAGGATCGTCTTCAAATTCTACTTCTGAGTCATCAACGGTTCACCATTTTCAAACTTCCTTTGGTTCAAGCATTTCTGGTTCCGTCAGACGTCTGCTCTCCGAAGCTGCTTCTTCGCAGATTGGTTACTGTGCTGGCAAGAACAAGGTGCCTTTGTTATCACTGGAAGCTTTACACCATCTTCATATCTTTATATTCATTCTCGCTATTGTCCACGTGAGCTTTTCTGTTCTTACTGTCGTCTTTGGCGGAGCAAAGATACGACAATGGAAGCACTGGGAGGATTCCATCGCAAAAGAGAACTATGATACCCAACAAATTCTGAAATCAAAGGTCACCAACGTCCATCAGCACACTTTTATTCAGGATCATTTTCGGGGTTTTGGTAAAAATTCAGCTCTTCTTGGTTGGTTGCATTCGTTTGTCAAGCAATTTTATAATTCCGTGACTAAATCAGATTACGCGACAATGCGATTGGGTTTCATCATGATGCATTGCAGGGGAAACCCGAAGTTTAACTTTCACAAATACATGATAAGAGCGCTTGAAGATGATTTTAAGAAAGTCGTTGGGATATGGTATCTTTGGATCTTTGTGGTGATCTTCCTGCTGCTCAATATTAGTGGTTGGCATACATACTTCTGGATTGCATTCATTCCATTAATCCTCTTACTTGCCGTGGGGACTAAATTAGAGCACGTGATTACCCAGTTAGCTCAGGAGGTCGCGGAGAAACATGCTGCCATCGAAGGCGAATTGGTCGTCCAGCCATCGGATGATCACTTTTGGTTTCATCGCCCCCGCATTATCCTCTACTTGATCCATTTTATTCTTTTTCAAAATGCTTTTGAGATTGGATTTTTCTTCTGGATTTGGGTTCAATACGGATTCGACTCGTGCATAATGGGACAAGTGCGTTTCATCATTCCGAGGCTCATAATCGGGGTGTTTGTTCAAGTGCTTTGTAGTTACAGCACCCTACCTCTATATGCGATTGTAACGCAGATGGGAAGTTCATTCAAGAAAGTGATATTTGACGAACATGTACAAACTGGTCTGGTTGGTTGGGCTCAGAAAGTGAAGAGGAAGAAAGGACTGAAGGCAGCCATTGATGGCTCTGTTCAAGATAAGTCCAAAGACGGCTCTACCGTCGGGATACAGCTCGGAAGCGTCATGAGTAAAGCGGCAGTCCAGGAGATTCTGCCTGCCAAGGATCCTGACCGGTCGTGA 1545 44.21 MSGGEEVETNLEFTPTWVVAAVCTVIVAISLAVERLIHYTGKYLKRKNQKPLFEALLKIKEELMLLGFISLLLTVFQSTITKFCVHEGLTQNLLPCKLSDRGEGEQGSSSNSTSESSTVHHFQTSFGSSISGSVRRLLSEAASSQIGYCAGKNKVPLLSLEALHHLHIFIFILAIVHVSFSVLTVVFGGAKIRQWKHWEDSIAKENYDTQQILKSKVTNVHQHTFIQDHFRGFGKNSALLGWLHSFVKQFYNSVTKSDYATMRLGFIMMHCRGNPKFNFHKYMIRALEDDFKKVVGIWYLWIFVVIFLLLNISGWHTYFWIAFIPLILLLAVGTKLEHVITQLAQEVAEKHAAIEGELVVQPSDDHFWFHRPRIILYLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGQVRFIIPRLIIGVFVQVLCSYSTLPLYAIVTQMGSSFKKVIFDEHVQTGLVGWAQKVKRKKGLKAAIDGSVQDKSKDGSTVGIQLGSVMSKAAVQEILPAKDPDRS 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1944451 1948994 + Bda024631.1 Bda08g00217 11073

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00217 514 MobiDBLite consensus disorder prediction 100 119 - -
Bda08g00217 514 Pfam Mlo family 9 483 IPR004326 GO:0006952|GO:0016021
Bda08g00217 514 PANTHER MLO-LIKE PROTEIN 3 504 - -
Bda08g00217 514 MobiDBLite consensus disorder prediction 103 119 - -
Bda08g00217 514 PANTHER MLO-LIKE PROTEIN 1 3 504 IPR004326 GO:0006952|GO:0016021
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00217 K08472 MLO; mlo protein - csv:101211868 810.831
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00915 Bda-Chr3:8082630 Bda08g00217 Bda-Chr8:1944451 5.04E-26 dispersed
Bda08g00217 Bda-Chr8:1944451 Bda01g01568 Bda-Chr1:51542215 2.15E-135 dispersed
Bda08g00215 Bda-Chr8:1926334 Bda08g00217 Bda-Chr8:1944451 0 proximal
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda07g00291 . 3 530 MLO family AT5G53760 66.4 5.5e-203 704.1
Bda09g00184 CCT,ECH 13 433 MLO family AT3G45290 58.8 6.9e-141 497.7
Bda07g00625 BCT,CCT,ECH 13 444 MLO family AT3G45290 57.2 4.3e-135 478.4
Bda07g00291 . 3 530 MLO family AT1G26700 64.1 3.5e-191 664.8
Bda15g00172 CCT,ECH 4 481 MLO family AT2G39200 71.4 4.8e-199 691.0
Bda14g00343 CCT,ECH 5 536 MLO family AT2G39200 65.3 6.5e-196 680.6
Bda09g01468 CCT,ECH 9 525 MLO family AT2G39200 63.8 1.0e-185 646.7
Bda09g00185 BCT,CCT,ECH 8 575 MLO family AT2G39200 57.2 1.7e-180 629.4
Bda02g00768 CCT,ECH 9 561 MLO family AT2G39200 58.9 8.0e-178 620.5
Bda01g01568 . 29 478 MLO family AT2G39200 51.1 1.0e-124 444.1
Bda15g00172 CCT,ECH 3 405 MLO family AT1G61560 68.3 5.8e-162 567.4
Bda14g00343 CCT,ECH 1 417 MLO family AT1G61560 67.1 9.5e-157 550.1
Bda09g01468 CCT,ECH 9 415 MLO family AT1G61560 65.2 3.2e-152 535.0
Bda02g00768 CCT,ECH 9 466 MLO family AT1G61560 59.8 1.9e-149 525.8
Bda09g00185 BCT,CCT,ECH 8 475 MLO family AT1G61560 57.8 1.3e-145 513.1
Bda10g00277 CCT,ECH 28 415 MLO family AT1G61560 53.2 6.7e-118 421.0
Bda01g01568 . 29 420 MLO family AT1G61560 51.5 1.7e-113 406.4
Bda10g00277 CCT,ECH 10 465 MLO family AT2G17430 68.6 8.3e-177 617.1
Bda04g00205 . 10 471 MLO family AT2G17430 63.9 2.7e-167 585.5
Bda01g01568 . 26 484 MLO family AT2G17430 61.8 5.1e-158 554.7
Bda10g00277 CCT,ECH 1 561 MLO family AT2G17480 63.0 1.1e-193 673.3
Bda04g00205 . 4 534 MLO family AT2G17480 61.7 1.5e-179 626.3
Bda01g01568 . 29 483 MLO family AT2G17480 64.0 2.6e-163 572.4
Bda01g01568 . 29 385 MLO family AT1G42560 65.2 6.8e-133 470.7
Bda10g00277 CCT,ECH 28 380 MLO family AT1G42560 58.6 2.9e-115 412.1
Bda04g00205 . 28 386 MLO family AT1G42560 57.3 5.0e-112 401.4
Bda09g01468 CCT,ECH 1 380 MLO family AT1G42560 51.9 8.9e-101 364.0
Bda08g00215 . 5 421 MLO family AT4G24250 54.0 2.6e-119 425.6
Bda08g00217 . 5 420 MLO family AT4G24250 52.8 3.3e-114 408.7
Bda10g00277 CCT,ECH 5 380 MLO family AT5G65970 69.7 3.2e-148 521.9
Bda04g00205 . 5 386 MLO family AT5G65970 64.7 7.4e-137 484.2
Bda01g01568 . 23 385 MLO family AT5G65970 62.9 4.8e-128 454.9
Bda09g01468 CCT,ECH 2 380 MLO family AT5G65970 50.9 4.6e-102 368.6
Bda01g01568 . 29 511 MLO family AT2G33670 65.4 2.0e-177 619.0
Bda10g00277 CCT,ECH 28 463 MLO family AT2G33670 63.4 9.1e-154 540.4
Bda04g00205 . 28 469 MLO family AT2G33670 61.9 9.4e-151 530.4
Bda09g01468 CCT,ECH 1 484 MLO family AT2G33670 50.2 7.0e-130 461.1
Bda15g00172 CCT,ECH 62 481 MLO family AT1G11310 69.7 6.9e-173 604.0
Bda14g00343 CCT,ECH 63 508 MLO family AT1G11310 64.7 5.6e-167 584.3
Bda09g01468 CCT,ECH 64 496 MLO family AT1G11310 64.2 4.3e-159 558.1
Bda02g00768 CCT,ECH 64 558 MLO family AT1G11310 57.3 1.7e-155 546.2
Bda09g00185 BCT,CCT,ECH 63 582 MLO family AT1G11310 55.2 9.6e-151 530.4
Bda02g00508 . 64 421 MLO family AT1G11310 50.4 1.9e-106 383.3
Bda01g01568 . 84 473 MLO family AT1G11310 51.3 6.1e-105 378.3
Bda08g00215 . 1 505 MLO family AT2G44110 58.2 6.5e-160 560.8
Bda08g00217 . 1 504 MLO family AT2G44110 58.4 1.5e-156 549.7
Bda08g00215 . 7 487 MLO family AT4G02600 71.6 1.3e-198 689.5
Bda08g00217 . 3 486 MLO family AT4G02600 71.2 2.7e-196 681.8
Bda03g00915 . 2 256 MLO family AT4G02600 54.3 1.5e-69 260.8
Bda08g00432 . 1 507 MLO family AT1G11000 70.1 2.6e-197 685.3
Bda11g01831 . 1 457 MLO family AT1G11000 53.3 5.4e-134 474.9
Bda08g00215 . 7 487 MLO family AT4G02600 71.6 1.3e-198 689.5
Bda08g00217 . 3 486 MLO family AT4G02600 71.2 2.7e-196 681.8
Bda03g00915 . 2 256 MLO family AT4G02600 54.3 1.5e-69 260.8
Bda15g00172 CCT,ECH 62 481 MLO family AT1G11310 69.7 6.9e-173 604.0
Bda14g00343 CCT,ECH 63 508 MLO family AT1G11310 64.7 5.6e-167 584.3
Bda09g01468 CCT,ECH 64 496 MLO family AT1G11310 64.2 4.3e-159 558.1
Bda02g00768 CCT,ECH 64 558 MLO family AT1G11310 57.3 1.7e-155 546.2
Bda09g00185 BCT,CCT,ECH 63 582 MLO family AT1G11310 55.2 9.6e-151 530.4
Bda02g00508 . 64 421 MLO family AT1G11310 50.4 1.9e-106 383.3
Bda01g01568 . 84 473 MLO family AT1G11310 51.3 6.1e-105 378.3
Bda09g00184 CCT,ECH 13 433 MLO family AT3G45290 58.8 6.9e-141 497.7
Bda07g00625 BCT,CCT,ECH 13 444 MLO family AT3G45290 57.2 4.3e-135 478.4
Bda08g00432 . 1 507 MLO family AT1G11000 70.1 2.6e-197 685.3
Bda11g01831 . 1 457 MLO family AT1G11000 53.3 5.4e-134 474.9
Bda01g01568 . 29 511 MLO family AT2G33670 65.4 2.0e-177 619.0
Bda10g00277 CCT,ECH 28 463 MLO family AT2G33670 63.4 9.1e-154 540.4
Bda04g00205 . 28 469 MLO family AT2G33670 61.9 9.4e-151 530.4
Bda09g01468 CCT,ECH 1 484 MLO family AT2G33670 50.2 7.0e-130 461.1
Bda15g00172 CCT,ECH 3 405 MLO family AT1G61560 68.3 5.8e-162 567.4
Bda14g00343 CCT,ECH 1 417 MLO family AT1G61560 67.1 9.5e-157 550.1
Bda09g01468 CCT,ECH 9 415 MLO family AT1G61560 65.2 3.2e-152 535.0
Bda02g00768 CCT,ECH 9 466 MLO family AT1G61560 59.8 1.9e-149 525.8
Bda09g00185 BCT,CCT,ECH 8 475 MLO family AT1G61560 57.8 1.3e-145 513.1
Bda10g00277 CCT,ECH 28 415 MLO family AT1G61560 53.2 6.7e-118 421.0
Bda01g01568 . 29 420 MLO family AT1G61560 51.5 1.7e-113 406.4
Bda10g00277 CCT,ECH 10 465 MLO family AT2G17430 68.6 8.3e-177 617.1
Bda04g00205 . 10 471 MLO family AT2G17430 63.9 2.7e-167 585.5
Bda01g01568 . 26 484 MLO family AT2G17430 61.8 5.1e-158 554.7
Bda10g00277 CCT,ECH 1 561 MLO family AT2G17480 63.0 1.1e-193 673.3
Bda04g00205 . 4 534 MLO family AT2G17480 61.7 1.5e-179 626.3
Bda01g01568 . 29 483 MLO family AT2G17480 64.0 2.6e-163 572.4
Bda01g01568 . 29 385 MLO family AT1G42560 65.2 6.8e-133 470.7
Bda10g00277 CCT,ECH 28 380 MLO family AT1G42560 58.6 2.9e-115 412.1
Bda04g00205 . 28 386 MLO family AT1G42560 57.3 5.0e-112 401.4
Bda09g01468 CCT,ECH 1 380 MLO family AT1G42560 51.9 8.9e-101 364.0
Bda10g00277 CCT,ECH 5 380 MLO family AT5G65970 69.7 3.2e-148 521.9
Bda04g00205 . 5 386 MLO family AT5G65970 64.7 7.4e-137 484.2
Bda01g01568 . 23 385 MLO family AT5G65970 62.9 4.8e-128 454.9
Bda09g01468 CCT,ECH 2 380 MLO family AT5G65970 50.9 4.6e-102 368.6
Bda07g00291 . 3 530 MLO family AT5G53760 66.4 5.5e-203 704.1
Bda15g00172 CCT,ECH 4 481 MLO family AT2G39200 71.4 4.8e-199 691.0
Bda14g00343 CCT,ECH 5 536 MLO family AT2G39200 65.3 6.5e-196 680.6
Bda09g01468 CCT,ECH 9 525 MLO family AT2G39200 63.8 1.0e-185 646.7
Bda09g00185 BCT,CCT,ECH 8 575 MLO family AT2G39200 57.2 1.7e-180 629.4
Bda02g00768 CCT,ECH 9 561 MLO family AT2G39200 58.9 8.0e-178 620.5
Bda01g01568 . 29 478 MLO family AT2G39200 51.1 1.0e-124 444.1
Bda08g00215 . 5 421 MLO family AT4G24250 54.0 2.6e-119 425.6
Bda08g00217 . 5 420 MLO family AT4G24250 52.8 3.3e-114 408.7
Bda07g00291 . 3 530 MLO family AT1G26700 64.1 3.5e-191 664.8
Bda08g00215 . 1 505 MLO family AT2G44110 58.2 6.5e-160 560.8
Bda08g00217 . 1 504 MLO family AT2G44110 58.4 1.5e-156 549.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000916 3 4 3 1 3 3 3 2 3 2 4 3 3 3 2 3 3 6 3 2 2 2 1 2 2 2 3 6 5 2 86
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda08g00217 Bda_Chr08 FPKM 10.628866 8.431255 14.673605 13.987511 13.807041 13.886585 14.902097 14.067071 12.325281