Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00230 ACGGGGGAGTGCGACCATTTCAAAGCGGCCTTCTCGCATAAACCCGCAGGGCCTCCTCTCACGGGAGAGAGAGCGATGAGTATGGCGATTCTTGAGACCATTGTCGTTGACCTTCTCCTTATGCTGCTTTTGATTATCATCATCCTCTTTGCTTGCAAGCCATGGCGATTCCTTTCTTTTTCTCGGTCCCGTACGATCAAGGTCCCTGAACTTGAGAGGCCCCTTGTTTCAGACAATGTGGATCCTCAAGATCAAAGCAATGAATTTCCAAGAGATTACGATTTAGAAGGAGCTTTTCAATCTGATGGGCATTTTTGCTCCCCTCGAGCACATGAACTCATTTACAAACAAAGGCTTCCAGCTACATCTCCAGAAATGATTTATCGATTGTTTTTTTGGCTGAAGAAACTATATATTCTACGTCTGGTTCTAGATGTACTTGCAGATTCTTCGGAAGAAATTTCTGTTGGCGAGACACTTAAGAGGCCATACGATGCAAACCAGATTTCAGAAGTTCAAAGGCCTAGTAGACAGCGTGTTGGAAATGAAAGACATCAAGAGTTTCCCAGAAAAGATATCTTACATCAAAGAAGCTGCATCTCTTTGGAGGTTATTTCTGGTCCTTCTCGCGGATTTAGAGCTTTTATACATTCAACAAGCACCTCTCGGCTTCCGCTGACTCTTGGGAGGGTTTCTCCTAGTGATATTGTATTGAAGGATTCAGAGATTTCAGGGAAGCATGCATTGATAAATTGGGATTTAAAAAAAATGAAATGGGAGCTGTTAGACATGGGTAGCTTGAATGGAACACTGCTAAATTCCCAACCTATACACCATCCTGATTCTGGAAGTAGGCATTGGAGTGATCCCACTGAACTTGCTAGTGGAGATATAATAACACTTGGTTCAACCTCAAACGTACATGTTCATATAACTTCTCAAACTGAGGATCAAATTCCCTTTGGATTTGGTGTGGCATCTGATCCCATGGCTTTGCGGCGGGGAGGAAAGAAGTTGGTCATGGAAGATATGTTTTATTATAAGTGGCCTCTTCCTGGAGTCAGTCAGGTATTGGCTTGTATATATTTTCTCTTAATCATGATTTTTTGCATCTTCCTTATACAAAGAATATTTTTTGTTTTGCAGTTGGGATTGTTTGGGATTTGTGATGGTCATGGTGGTTCAGCAGCTGCCAAAGATGCAAGCGAAATTCTACCCGAGATGGTTGCCACTATTTTATCCGATTCTCTGAAAAGAGATCGGCTACTTTCCCTATGCAATGCTTCAGATGTTTTAAGGGATGCATTTTCTCGGACAGAATCGTTCATGAATCACCACTATGAGGGCTGCACTGCAACCTTACTTCTTGTATGGGTTGATTGTAATGATAATTACTTTGTGCAATGTGCAAATGTTGGCGATTCTGCTTGTATTTTGAATGTTGATGGGCAACAGATAAAGATGACTGAAGACCATAGAGTAACTAGCTATTCAGAACGACAACGAATAGAAAAATTAGGAGAGCCATTGAAAGATGGGGAAACACGTTTATGGGGTTTGAACCTTGCACGTATGCTTGGTGACAAATTTCTGAAACAACAGGATATTCGCTTCAGTTCAGAGCCTTATATAAGTCAAGTTGTACATATTAATCAAGCGAGCAGGGCATTTGCACTCATGGCAAGTGATGGCTTTTGGGATGTCATTAGTGTCAAGAAGGCAATTCAGCTAGTTCTTCAGGCTCAGGAGAGATACTCTAAAGATTCAGAAAATTTAGCGGAGAATATTGCTAATTTTTTGTTGGGTGAGGCTAGAACACTGCGAACAAAGGATAATACCACTATAATTTACTTAGATTTTGACTCACATAAAATCTCTTGTAAAGTTGAATCATAA 1896 40.98 TGECDHFKAAFSHKPAGPPLTGERAMSMAILETIVVDLLLMLLLIIIILFACKPWRFLSFSRSRTIKVPELERPLVSDNVDPQDQSNEFPRDYDLEGAFQSDGHFCSPRAHELIYKQRLPATSPEMIYRLFFWLKKLYILRLVLDVLADSSEEISVGETLKRPYDANQISEVQRPSRQRVGNERHQEFPRKDILHQRSCISLEVISGPSRGFRAFIHSTSTSRLPLTLGRVSPSDIVLKDSEISGKHALINWDLKKMKWELLDMGSLNGTLLNSQPIHHPDSGSRHWSDPTELASGDIITLGSTSNVHVHITSQTEDQIPFGFGVASDPMALRRGGKKLVMEDMFYYKWPLPGVSQVLACIYFLLIMIFCIFLIQRIFFVLQLGLFGICDGHGGSAAAKDASEILPEMVATILSDSLKRDRLLSLCNASDVLRDAFSRTESFMNHHYEGCTATLLLVWVDCNDNYFVQCANVGDSACILNVDGQQIKMTEDHRVTSYSERQRIEKLGEPLKDGETRLWGLNLARMLGDKFLKQQDIRFSSEPYISQVVHINQASRAFALMASDGFWDVISVKKAIQLVLQAQERYSKDSENLAENIANFLLGEARTLRTKDNTTIIYLDFDSHKISCKVES 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2296955 2303410 + Bda024645.2 Bda08g00230 11086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00230 631 SUPERFAMILY PP2C-like 336 622 IPR036457 -
Bda08g00230 631 ProSiteProfiles Forkhead-associated (FHA) domain profile. 226 277 IPR000253 GO:0005515
Bda08g00230 631 PANTHER PROTEIN PHOSPHATASE 2C 70 58 357 - -
Bda08g00230 631 PANTHER PROTEIN PHOSPHATASE 2C 70 382 630 - -
Bda08g00230 631 Pfam Protein phosphatase 2C 384 612 IPR001932 -
Bda08g00230 631 ProSiteProfiles PPM-type phosphatase domain profile. 322 620 IPR001932 -
Bda08g00230 631 PANTHER PROTEIN PHOSPHATASE 2C 58 357 IPR015655 GO:0004722|GO:0006470
Bda08g00230 631 Gene3D - 376 628 IPR036457 -
Bda08g00230 631 ProSitePatterns PPM-type phosphatase domain signature. 385 393 IPR000222 GO:0043169
Bda08g00230 631 SUPERFAMILY SMAD/FHA domain 199 308 IPR008984 GO:0005515
Bda08g00230 631 CDD FHA 202 305 IPR000253 GO:0005515
Bda08g00230 631 Gene3D - 194 331 - -
Bda08g00230 631 SMART FHA_2 225 277 IPR000253 GO:0005515
Bda08g00230 631 SMART PP2C_4 316 618 IPR001932 -
Bda08g00230 631 Pfam FHA domain 227 302 IPR000253 GO:0005515
Bda08g00230 631 PANTHER PROTEIN PHOSPHATASE 2C 382 630 IPR015655 GO:0004722|GO:0006470
Bda08g00230 631 CDD PP2Cc 372 620 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00897 Bda08g00230 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00230 Bda-Chr8:2296955 Bda01g00652 Bda-Chr1:33517281 8.71E-19 dispersed
Bda03g00897 Bda-Chr3:7832645 Bda08g00230 Bda-Chr8:2296955 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00230 K01090 - mnt:21390736 771.926