Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00254 ATGAATGCCAGTCCAGCGACGCTCCGATCGATTCTGGACAAACCGCTTAACCAGCTCACTGAGGATGACATTTCGCAGCTCACCCGGGAGGACTGCCGGAAATATCTCAAAGAAAAAGGAATGCGGAGGCCTTCGTGGAACAAATCGCAGGCGATCCAGCAGGTTATTTGCCTAAAAGCTTTGCTTGAGCCCTGCGATGATTCCGGAGCCGTTGCGCTCCGAAAGCTTGCTGTTTCTACTCGTGTGACTTTGAGTCCTGGAGATTCTGCTAAAGAACCAAGCGATGATACGCAGCCTCCATTGTCGACTGATGATGCTGTTCCAACTAGGCAAGCTGAGCCTTCGGATTCTATTCAAGAGGATTCACATACTGATTCAGAGTACAAGGTCCCCAGTCTGAGAAGCAAGTGCACCATAAATGGTTCAGTTGGGCAAATGGCAATTTTTTACAGTGGCAAGGTGAACGTGTACGATGAAATACCTCGTGATAAAGCACGGGCAATCATGCATGTTGCAGCTCATCCAATTCATTTTAGAGGAGATCATTTATTTGGTGGATTCCTCTTCGATCTCACTCTCCATGCCATTTGCAGATGGCAAATGAAAAAGGCGGCCCTTTTCCTCTTAAACCCACCCACCACCATGCAACACAATCAGAGAACGTGGTTGAGTGTGCTCAGCATCAATACGAAATGGGAAACAGTACTCCAAATTCTGGGGGTCAGATAA 729 47.74 MNASPATLRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVICLKALLEPCDDSGAVALRKLAVSTRVTLSPGDSAKEPSDDTQPPLSTDDAVPTRQAEPSDSIQEDSHTDSEYKVPSLRSKCTINGSVGQMAIFYSGKVNVYDEIPRDKARAIMHVAAHPIHFRGDHLFGGFLFDLTLHAICRWQMKKAALFLLNPPTTMQHNQRTWLSVLSINTKWETVLQILGVR 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2622065 2624886 + Bda024681.1 Bda08g00254 11110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00254 242 ProSiteProfiles Tify domain profile. 139 174 IPR010399 -
Bda08g00254 242 MobiDBLite consensus disorder prediction 82 129 - -
Bda08g00254 242 MobiDBLite consensus disorder prediction 82 115 - -
Bda08g00254 242 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 6 183 - -
Bda08g00254 242 SMART tify_2 139 174 IPR010399 -
Bda08g00254 242 Pfam tify domain 145 173 IPR010399 -
Bda08g00254 242 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 183 IPR040390 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00254 Bda11g00596 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00596 Bda-Chr11:6070796 Bda08g00254 Bda-Chr8:2622065 1.01E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16243 PF06200 tify 2.10E-12 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00254 - - csv:101204377 233.417