Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00254 | ATGAATGCCAGTCCAGCGACGCTCCGATCGATTCTGGACAAACCGCTTAACCAGCTCACTGAGGATGACATTTCGCAGCTCACCCGGGAGGACTGCCGGAAATATCTCAAAGAAAAAGGAATGCGGAGGCCTTCGTGGAACAAATCGCAGGCGATCCAGCAGGTTATTTGCCTAAAAGCTTTGCTTGAGCCCTGCGATGATTCCGGAGCCGTTGCGCTCCGAAAGCTTGCTGTTTCTACTCGTGTGACTTTGAGTCCTGGAGATTCTGCTAAAGAACCAAGCGATGATACGCAGCCTCCATTGTCGACTGATGATGCTGTTCCAACTAGGCAAGCTGAGCCTTCGGATTCTATTCAAGAGGATTCACATACTGATTCAGAGTACAAGGTCCCCAGTCTGAGAAGCAAGTGCACCATAAATGGTTCAGTTGGGCAAATGGCAATTTTTTACAGTGGCAAGGTGAACGTGTACGATGAAATACCTCGTGATAAAGCACGGGCAATCATGCATGTTGCAGCTCATCCAATTCATTTTAGAGGAGATCATTTATTTGGTGGATTCCTCTTCGATCTCACTCTCCATGCCATTTGCAGATGGCAAATGAAAAAGGCGGCCCTTTTCCTCTTAAACCCACCCACCACCATGCAACACAATCAGAGAACGTGGTTGAGTGTGCTCAGCATCAATACGAAATGGGAAACAGTACTCCAAATTCTGGGGGTCAGATAA | 729 | 47.74 | MNASPATLRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVICLKALLEPCDDSGAVALRKLAVSTRVTLSPGDSAKEPSDDTQPPLSTDDAVPTRQAEPSDSIQEDSHTDSEYKVPSLRSKCTINGSVGQMAIFYSGKVNVYDEIPRDKARAIMHVAAHPIHFRGDHLFGGFLFDLTLHAICRWQMKKAALFLLNPPTTMQHNQRTWLSVLSINTKWETVLQILGVR | 242 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2622065 | 2624886 | + | Bda024681.1 | Bda08g00254 | 11110 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00254 | 242 | ProSiteProfiles | Tify domain profile. | 139 | 174 | IPR010399 | - | |
Bda08g00254 | 242 | MobiDBLite | consensus disorder prediction | 82 | 129 | - | - | |
Bda08g00254 | 242 | MobiDBLite | consensus disorder prediction | 82 | 115 | - | - | |
Bda08g00254 | 242 | PANTHER | PROTEIN TIFY 4B-LIKE ISOFORM X1 | 6 | 183 | - | - | |
Bda08g00254 | 242 | SMART | tify_2 | 139 | 174 | IPR010399 | - | |
Bda08g00254 | 242 | Pfam | tify domain | 145 | 173 | IPR010399 | - | |
Bda08g00254 | 242 | PANTHER | PROTEIN TIFY 4A-RELATED-RELATED | 6 | 183 | IPR040390 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda08g00254 | Bda11g00596 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g00596 | Bda-Chr11:6070796 | Bda08g00254 | Bda-Chr8:2622065 | 1.01E-69 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16243 | PF06200 | tify | 2.10E-12 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00254 | - | - | csv:101204377 | 233.417 |