Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00266 TTGGGATGTTTGAAAATGGTTCGGGACGGTCATGTGGTGCCGGCCGACCCGCAGGCTTCGGTGGCGGCGAAGAAGAAATCGTCTCGGAGTTGGATGCTTTTGGATTCAACCGGCCAAGGTACCGTCATCGATGTCGACAAGTATGCTGTAATGCACCGGGTCCAGATTCATGCACGAGACCTTCGGATTCTAGATCCTTTGCTCTCTTATCCGTCCACCATTCTTGGCCGCGAGGGAGCCATTGTTCTTAATTTGGAGCATATCAAGGCAATTATTACCTCTGAAGAGGTTTTGCTCCGAGATCCAATGGATGAGAATGTTATCCCAGTTGTTGAAGAGCTGCAAAGGCGATTGCCTCCCAATAATGCCATACAGCTTCAAAAGCAAGAAGATGGGAAAGAGTATCCTGGTGGGCATAATGATGTTGAAGCGGGTGATGAAGATGATTCTCCATTTGAATTTCGAGCCCTAGAGGTAGCTTTAGAAGCCATTTGTAGTTTTCTTGCTGCACGAACAACAGAACTGGAGACTACAGCCTATCCTGCCTTAGATGAGCTCACCTCCAAAATTAGTAGCCGTAACTTAGACAGAGTTCGTAAACTGAAAAGTGCAATGACCAGGTTGACAGGAAGAGTTCAAAAGGTAAGGGATGAGCTTGAGCAGCTATTGGATGACGACGACGATATGACAGACCTTTACTTGACAAGAAAGTTAGCTGGGGCATCTTCTCCTGTTAGTGCCTCTGGCGTTCCTAATTGGTATCCTGCCTCTCCTACGATAGGTTCAAAAATATCAAGAGCAAGCAGAGCTAGCATCGCAACTGTTCGTGGAGACGATAATGATGTCGAAGAGCTTGAAATGTTGCTGGAGGCTTACTTTATGCAAATTGATGGCACGTTGAACAAATTAACAACGATGAGAGTCAATTGGAAACTGCTAACTATGAAGTGTAACGTGGGCAATAAGACACTACACTTAAAGGGCGACCCTAGTTTAGGGAAGACAAAAATCTCTATGAATGCTATGTTGCGCGAATACATAGATGACACAGAAGATTACATTAATATTCAGTGTAGTTGTAATTATCATTTCTCTCAACCTCGAACCCTCTGTTTGTTGCAGCTGGAGCTTTTTCTCAGTACAGGGACTGTTTGTTTGGCCATTTATGCTTTGGTGGCTGCCATTTTTGGCATGAATATCCCGTACACTTGGAATACCGGCCATAGTTACATGTTCAAATGGGTGGTCATCCTGACGACTGTTGGTTGTGCAATTCTATTCGTGATAGTTATTGCATATGCTCGCCACAAAGGTTTGGTGGGATCGTGA 1329 44.92 LGCLKMVRDGHVVPADPQASVAAKKKSSRSWMLLDSTGQGTVIDVDKYAVMHRVQIHARDLRILDPLLSYPSTILGREGAIVLNLEHIKAIITSEEVLLRDPMDENVIPVVEELQRRLPPNNAIQLQKQEDGKEYPGGHNDVEAGDEDDSPFEFRALEVALEAICSFLAARTTELETTAYPALDELTSKISSRNLDRVRKLKSAMTRLTGRVQKVRDELEQLLDDDDDMTDLYLTRKLAGASSPVSASGVPNWYPASPTIGSKISRASRASIATVRGDDNDVEELEMLLEAYFMQIDGTLNKLTTMRVNWKLLTMKCNVGNKTLHLKGDPSLGKTKISMNAMLREYIDDTEDYINIQCSCNYHFSQPRTLCLLQLELFLSTGTVCLAIYALVAAIFGMNIPYTWNTGHSYMFKWVVILTTVGCAILFVIVIAYARHKGLVGS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2739618 2749160 + Bda024695.2 Bda08g00266 11122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00266 442 PANTHER MAGNESIUM TRANSPORTER MRS2-I 6 307 - -
Bda08g00266 442 PANTHER MAGNESIUM TRANSPORTER MRS2-I 341 442 - -
Bda08g00266 442 CDD Mrs2_Mfm1p-like 31 439 IPR039204 -
Bda08g00266 442 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 341 442 IPR039204 -
Bda08g00266 442 MobiDBLite consensus disorder prediction 132 146 - -
Bda08g00266 442 Gene3D Magnesium transport protein CorA, transmembrane region 110 361 - -
Bda08g00266 442 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 378 430 IPR045863 -
Bda08g00266 442 MobiDBLite consensus disorder prediction 126 146 - -
Bda08g00266 442 Gene3D - 17 102 - -
Bda08g00266 442 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 307 IPR039204 -
Bda08g00266 442 Coils Coil 198 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00266 Bda-Chr8:2739618 Bda11g01176 Bda-Chr11:12156585 4.34E-75 dispersed
Bda08g00266 Bda-Chr8:2739618 Bda12g00562 Bda-Chr12:9654647 3.11E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00266 K16075 - pop:7467525 572.778