Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00266 | TTGGGATGTTTGAAAATGGTTCGGGACGGTCATGTGGTGCCGGCCGACCCGCAGGCTTCGGTGGCGGCGAAGAAGAAATCGTCTCGGAGTTGGATGCTTTTGGATTCAACCGGCCAAGGTACCGTCATCGATGTCGACAAGTATGCTGTAATGCACCGGGTCCAGATTCATGCACGAGACCTTCGGATTCTAGATCCTTTGCTCTCTTATCCGTCCACCATTCTTGGCCGCGAGGGAGCCATTGTTCTTAATTTGGAGCATATCAAGGCAATTATTACCTCTGAAGAGGTTTTGCTCCGAGATCCAATGGATGAGAATGTTATCCCAGTTGTTGAAGAGCTGCAAAGGCGATTGCCTCCCAATAATGCCATACAGCTTCAAAAGCAAGAAGATGGGAAAGAGTATCCTGGTGGGCATAATGATGTTGAAGCGGGTGATGAAGATGATTCTCCATTTGAATTTCGAGCCCTAGAGGTAGCTTTAGAAGCCATTTGTAGTTTTCTTGCTGCACGAACAACAGAACTGGAGACTACAGCCTATCCTGCCTTAGATGAGCTCACCTCCAAAATTAGTAGCCGTAACTTAGACAGAGTTCGTAAACTGAAAAGTGCAATGACCAGGTTGACAGGAAGAGTTCAAAAGGTAAGGGATGAGCTTGAGCAGCTATTGGATGACGACGACGATATGACAGACCTTTACTTGACAAGAAAGTTAGCTGGGGCATCTTCTCCTGTTAGTGCCTCTGGCGTTCCTAATTGGTATCCTGCCTCTCCTACGATAGGTTCAAAAATATCAAGAGCAAGCAGAGCTAGCATCGCAACTGTTCGTGGAGACGATAATGATGTCGAAGAGCTTGAAATGTTGCTGGAGGCTTACTTTATGCAAATTGATGGCACGTTGAACAAATTAACAACGATGAGAGTCAATTGGAAACTGCTAACTATGAAGTGTAACGTGGGCAATAAGACACTACACTTAAAGGGCGACCCTAGTTTAGGGAAGACAAAAATCTCTATGAATGCTATGTTGCGCGAATACATAGATGACACAGAAGATTACATTAATATTCAGTGTAGTTGTAATTATCATTTCTCTCAACCTCGAACCCTCTGTTTGTTGCAGCTGGAGCTTTTTCTCAGTACAGGGACTGTTTGTTTGGCCATTTATGCTTTGGTGGCTGCCATTTTTGGCATGAATATCCCGTACACTTGGAATACCGGCCATAGTTACATGTTCAAATGGGTGGTCATCCTGACGACTGTTGGTTGTGCAATTCTATTCGTGATAGTTATTGCATATGCTCGCCACAAAGGTTTGGTGGGATCGTGA | 1329 | 44.92 | LGCLKMVRDGHVVPADPQASVAAKKKSSRSWMLLDSTGQGTVIDVDKYAVMHRVQIHARDLRILDPLLSYPSTILGREGAIVLNLEHIKAIITSEEVLLRDPMDENVIPVVEELQRRLPPNNAIQLQKQEDGKEYPGGHNDVEAGDEDDSPFEFRALEVALEAICSFLAARTTELETTAYPALDELTSKISSRNLDRVRKLKSAMTRLTGRVQKVRDELEQLLDDDDDMTDLYLTRKLAGASSPVSASGVPNWYPASPTIGSKISRASRASIATVRGDDNDVEELEMLLEAYFMQIDGTLNKLTTMRVNWKLLTMKCNVGNKTLHLKGDPSLGKTKISMNAMLREYIDDTEDYINIQCSCNYHFSQPRTLCLLQLELFLSTGTVCLAIYALVAAIFGMNIPYTWNTGHSYMFKWVVILTTVGCAILFVIVIAYARHKGLVGS | 442 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2739618 | 2749160 | + | Bda024695.2 | Bda08g00266 | 11122 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00266 | 442 | PANTHER | MAGNESIUM TRANSPORTER MRS2-I | 6 | 307 | - | - | |
Bda08g00266 | 442 | PANTHER | MAGNESIUM TRANSPORTER MRS2-I | 341 | 442 | - | - | |
Bda08g00266 | 442 | CDD | Mrs2_Mfm1p-like | 31 | 439 | IPR039204 | - | |
Bda08g00266 | 442 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 341 | 442 | IPR039204 | - | |
Bda08g00266 | 442 | MobiDBLite | consensus disorder prediction | 132 | 146 | - | - | |
Bda08g00266 | 442 | Gene3D | Magnesium transport protein CorA, transmembrane region | 110 | 361 | - | - | |
Bda08g00266 | 442 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 378 | 430 | IPR045863 | - | |
Bda08g00266 | 442 | MobiDBLite | consensus disorder prediction | 126 | 146 | - | - | |
Bda08g00266 | 442 | Gene3D | - | 17 | 102 | - | - | |
Bda08g00266 | 442 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 6 | 307 | IPR039204 | - | |
Bda08g00266 | 442 | Coils | Coil | 198 | 225 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00266 | Bda-Chr8:2739618 | Bda11g01176 | Bda-Chr11:12156585 | 4.34E-75 | dispersed | |
Bda08g00266 | Bda-Chr8:2739618 | Bda12g00562 | Bda-Chr12:9654647 | 3.11E-100 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00266 | K16075 | - | pop:7467525 | 572.778 |