Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00275 | ATGGATTCGGTGAGGTGCTGGTTCAATAAGTTTAAGTCCAAAGACAAGTCGAAGTCTCCAAAGAAGAAAGAGGCAACAAGTGGGAAGGAGCCAGTAAAAGCTCCAACTACTGAGGAAATACCTTCAAATGTAACCAAACAGAAGGTTGCAGCTGCAAAGCAGTATATTGAAAACCATTATAAGAAGCAAATGAAGAACTTGCAGGAAAGGAAGGATAGGCGTGATTTATTAGAAAAAAAATTGGCTGATGCTGAGGTTTCTGAAGACGAGCTAAACAACTTACTTAAATACTTAGAGAAGAAGGAGACAGAATATATGCGCATTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCTTTGACTATGATAGGGAAGGGTGCATTTGGAGAGGCCATCATGATTTTGGCTTTCTTTCTTCCTTTAGACAGCGTTTTCGTGTTACAATTCCATCATATACTTTGTATAAAAAAGAGAGAAAATAATTGTAATATTAAAGAGATGGTACTTATTAGAACACTTCTAATTGTTAGAGTCTGTAGAGAGAAAGCAACGGGTCATGTATATGCTATGAAGAAGCTTAAAAAATCAGAGATGCTTCGAAGAGGCCAGATAGCTTTACCTGGTCTCATTCACTTCACTTACCCATTTTTATTTCATAATATCAAGGTTGAACATGTGAAAGCAGAGAGGAATCTACTTGCAGAGGTTGATAGCAATTGTATTGTGAAGCTGTACTGTTCCTTCCAAGATGAGGAATATTTATATCTAGTTATGGAATACCTACCGGGGGGAGATATGATGACTTTACTTATGCGGAAGGATATACTTACAGAAGATGAGGCCAAGTTTTATGTTGGGGAAACTGTTCTGGCTATTGAATCCATTCATAAACATAATTATATTCACAGTTATGGTTTAGATAAGAGCATCTTGTTGGTAGTAATCCTCTTTTTGTTGGCATTCTTCAGAGATATCAAGCCTGACAACTTACTACTAGATAGAACTGGTCATATGAAACTATCAGATTTTGGATTATGTAAACCATTGGACTGTACTAACCTCCAAGAAAAGGATTTTTCTATTGGAAACAACCTTAGTGGAGCCCTTCAAAGTGATGGGCGCCCTGCAATACCAAAACGGACACAGCAAGAACAACTGCAGCACTGGCAACGAAACAGGAGGATGCTAGCCTATTCGACTGTTGGAACTCCTGACTACATTGCCCCAGAAGTTTTGCTGAAGAAAGGATATGGAATGGAGTGTGATTGGTGGTCTCTTGGAGCTATAATGTATGAAATGCTTGTTGGGTACCCACCTTTTTATTCAGATGAACCCATGTCCACTTGTAGGAAGATAGTCAATTGGAGGACTCACTTAAAATTTCCAGAAGAAGCAAAACTCTCTCTGGAAGCTAAGGATCTAATAAGTAAACTCTTGTGCAATGTTGACCAGAGACTGGGAACAAAAGGGGCTGATGAAATAAAGGCTCACCCCTGGTTCAAGGGCATTGAATGGGATAAATTATATCAAATGAAAGCTGCATTTATTCCGGAAGTCAATGATGAACTGGATACTCAAAATTTTGAAAAATTTGAAGAGGTTGAAAACCAAATCCAGACATCATCAAAATCGGGTCCATGGAGAAAGATGCTCTCATCTAAGGATATTAACTTCGTGGGTTACACTTACAAGAACTTTGAAATTGTCAATGATCATCAGATACCTGGCATCGCTGAACTGAAGAAGAAGAGCACAAAACCTAAGAGACCTTCCATCAAAAACCTCTTTGGTAATTTCCTTATTATGACGCTGATCATCATGCATATTATGTTGTGTTTGTTGTCCGATGTGGATCGTGTTTTTGCCAATGCAGATGATGAATCGGCCATGGGTGCGAATCACTCGGTCCAGGGAAGTTTTTTGAAGCTCTTGCCTCCCCAGTTAGAGGTCCCTGAGAAGCAAATGGATGGGGAGGAGAAGCATTAA | 1989 | 39.27 | MDSVRCWFNKFKSKDKSKSPKKKEATSGKEPVKAPTTEEIPSNVTKQKVAAAKQYIENHYKKQMKNLQERKDRRDLLEKKLADAEVSEDELNNLLKYLEKKETEYMRIQRHKMGADDFEPLTMIGKGAFGEAIMILAFFLPLDSVFVLQFHHILCIKKRENNCNIKEMVLIRTLLIVRVCREKATGHVYAMKKLKKSEMLRRGQIALPGLIHFTYPFLFHNIKVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLVMEYLPGGDMMTLLMRKDILTEDEAKFYVGETVLAIESIHKHNYIHSYGLDKSILLVVILFLLAFFRDIKPDNLLLDRTGHMKLSDFGLCKPLDCTNLQEKDFSIGNNLSGALQSDGRPAIPKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSLEAKDLISKLLCNVDQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVENQIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQIPGIAELKKKSTKPKRPSIKNLFGNFLIMTLIIMHIMLCLLSDVDRVFANADDESAMGANHSVQGSFLKLLPPQLEVPEKQMDGEEKH | 662 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2863373 | 2868401 | + | Bda024707.3 | Bda08g00275 | 11131 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00275 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 400 | 519 | - | - | |
Bda08g00275 | 662 | Pfam | Protein kinase domain | 177 | 501 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g00275 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 94 | 554 | IPR011009 | - | |
Bda08g00275 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 177 | 265 | - | - | |
Bda08g00275 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 520 | 530 | - | - | |
Bda08g00275 | 662 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 37 | 131 | - | - | |
Bda08g00275 | 662 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 177 | 603 | - | - | |
Bda08g00275 | 662 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 502 | 574 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bda08g00275 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 266 | 351 | - | - | |
Bda08g00275 | 662 | CDD | STKc_NDR_like | 116 | 565 | - | - | |
Bda08g00275 | 662 | ProSiteProfiles | Protein kinase domain profile. | 118 | 501 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g00275 | 662 | Coils | Coil | 60 | 104 | - | - | |
Bda08g00275 | 662 | MobiDBLite | consensus disorder prediction | 12 | 45 | - | - | |
Bda08g00275 | 662 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 37 | 131 | - | - | |
Bda08g00275 | 662 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 177 | 603 | - | - | |
Bda08g00275 | 662 | SMART | serkin_6 | 169 | 501 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g00275 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 135 | - | - | |
Bda08g00275 | 662 | SMART | pkinase_C_6 | 502 | 566 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bda08g00275 | 662 | Pfam | Protein kinase C terminal domain | 520 | 564 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Bda08g00275 | 662 | MobiDBLite | consensus disorder prediction | 12 | 29 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00487 | Bda-Chr2:45741741 | Bda08g00275 | Bda-Chr8:2863373 | 0 | dispersed | |
Bda04g00643 | Bda-Chr4:55190617 | Bda08g00275 | Bda-Chr8:2863373 | 0 | dispersed | |
Bda08g00275 | Bda-Chr8:2863373 | Bda09g01079 | Bda-Chr9:41210689 | 0 | dispersed | |
Bda15g00561 | Bda-Chr15:8745370 | Bda08g00275 | Bda-Chr8:2863373 | 4.84E-10 | dispersed | |
Bda08g00275 | Bda-Chr8:2863373 | Bda10g00636 | Bda-Chr10:40402956 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69757 | PF00069 | Pkinase | 4.10E-47 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00275 | K08790 | - | qsu:112030601 | 934.095 |