Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00275 ATGGATTCGGTGAGGTGCTGGTTCAATAAGTTTAAGTCCAAAGACAAGTCGAAGTCTCCAAAGAAGAAAGAGGCAACAAGTGGGAAGGAGCCAGTAAAAGCTCCAACTACTGAGGAAATACCTTCAAATGTAACCAAACAGAAGGTTGCAGCTGCAAAGCAGTATATTGAAAACCATTATAAGAAGCAAATGAAGAACTTGCAGGAAAGGAAGGATAGGCGTGATTTATTAGAAAAAAAATTGGCTGATGCTGAGGTTTCTGAAGACGAGCTAAACAACTTACTTAAATACTTAGAGAAGAAGGAGACAGAATATATGCGCATTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCTTTGACTATGATAGGGAAGGGTGCATTTGGAGAGGCCATCATGATTTTGGCTTTCTTTCTTCCTTTAGACAGCGTTTTCGTGTTACAATTCCATCATATACTTTGTATAAAAAAGAGAGAAAATAATTGTAATATTAAAGAGATGGTACTTATTAGAACACTTCTAATTGTTAGAGTCTGTAGAGAGAAAGCAACGGGTCATGTATATGCTATGAAGAAGCTTAAAAAATCAGAGATGCTTCGAAGAGGCCAGATAGCTTTACCTGGTCTCATTCACTTCACTTACCCATTTTTATTTCATAATATCAAGGTTGAACATGTGAAAGCAGAGAGGAATCTACTTGCAGAGGTTGATAGCAATTGTATTGTGAAGCTGTACTGTTCCTTCCAAGATGAGGAATATTTATATCTAGTTATGGAATACCTACCGGGGGGAGATATGATGACTTTACTTATGCGGAAGGATATACTTACAGAAGATGAGGCCAAGTTTTATGTTGGGGAAACTGTTCTGGCTATTGAATCCATTCATAAACATAATTATATTCACAGTTATGGTTTAGATAAGAGCATCTTGTTGGTAGTAATCCTCTTTTTGTTGGCATTCTTCAGAGATATCAAGCCTGACAACTTACTACTAGATAGAACTGGTCATATGAAACTATCAGATTTTGGATTATGTAAACCATTGGACTGTACTAACCTCCAAGAAAAGGATTTTTCTATTGGAAACAACCTTAGTGGAGCCCTTCAAAGTGATGGGCGCCCTGCAATACCAAAACGGACACAGCAAGAACAACTGCAGCACTGGCAACGAAACAGGAGGATGCTAGCCTATTCGACTGTTGGAACTCCTGACTACATTGCCCCAGAAGTTTTGCTGAAGAAAGGATATGGAATGGAGTGTGATTGGTGGTCTCTTGGAGCTATAATGTATGAAATGCTTGTTGGGTACCCACCTTTTTATTCAGATGAACCCATGTCCACTTGTAGGAAGATAGTCAATTGGAGGACTCACTTAAAATTTCCAGAAGAAGCAAAACTCTCTCTGGAAGCTAAGGATCTAATAAGTAAACTCTTGTGCAATGTTGACCAGAGACTGGGAACAAAAGGGGCTGATGAAATAAAGGCTCACCCCTGGTTCAAGGGCATTGAATGGGATAAATTATATCAAATGAAAGCTGCATTTATTCCGGAAGTCAATGATGAACTGGATACTCAAAATTTTGAAAAATTTGAAGAGGTTGAAAACCAAATCCAGACATCATCAAAATCGGGTCCATGGAGAAAGATGCTCTCATCTAAGGATATTAACTTCGTGGGTTACACTTACAAGAACTTTGAAATTGTCAATGATCATCAGATACCTGGCATCGCTGAACTGAAGAAGAAGAGCACAAAACCTAAGAGACCTTCCATCAAAAACCTCTTTGGTAATTTCCTTATTATGACGCTGATCATCATGCATATTATGTTGTGTTTGTTGTCCGATGTGGATCGTGTTTTTGCCAATGCAGATGATGAATCGGCCATGGGTGCGAATCACTCGGTCCAGGGAAGTTTTTTGAAGCTCTTGCCTCCCCAGTTAGAGGTCCCTGAGAAGCAAATGGATGGGGAGGAGAAGCATTAA 1989 39.27 MDSVRCWFNKFKSKDKSKSPKKKEATSGKEPVKAPTTEEIPSNVTKQKVAAAKQYIENHYKKQMKNLQERKDRRDLLEKKLADAEVSEDELNNLLKYLEKKETEYMRIQRHKMGADDFEPLTMIGKGAFGEAIMILAFFLPLDSVFVLQFHHILCIKKRENNCNIKEMVLIRTLLIVRVCREKATGHVYAMKKLKKSEMLRRGQIALPGLIHFTYPFLFHNIKVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLVMEYLPGGDMMTLLMRKDILTEDEAKFYVGETVLAIESIHKHNYIHSYGLDKSILLVVILFLLAFFRDIKPDNLLLDRTGHMKLSDFGLCKPLDCTNLQEKDFSIGNNLSGALQSDGRPAIPKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSLEAKDLISKLLCNVDQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVENQIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQIPGIAELKKKSTKPKRPSIKNLFGNFLIMTLIIMHIMLCLLSDVDRVFANADDESAMGANHSVQGSFLKLLPPQLEVPEKQMDGEEKH 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2863373 2868401 + Bda024707.3 Bda08g00275 11131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00275 662 Gene3D Transferase(Phosphotransferase) domain 1 400 519 - -
Bda08g00275 662 Pfam Protein kinase domain 177 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00275 662 SUPERFAMILY Protein kinase-like (PK-like) 94 554 IPR011009 -
Bda08g00275 662 Gene3D Phosphorylase Kinase; domain 1 177 265 - -
Bda08g00275 662 Gene3D Phosphorylase Kinase; domain 1 520 530 - -
Bda08g00275 662 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 37 131 - -
Bda08g00275 662 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 177 603 - -
Bda08g00275 662 ProSiteProfiles AGC-kinase C-terminal domain profile. 502 574 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda08g00275 662 Gene3D Transferase(Phosphotransferase) domain 1 266 351 - -
Bda08g00275 662 CDD STKc_NDR_like 116 565 - -
Bda08g00275 662 ProSiteProfiles Protein kinase domain profile. 118 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00275 662 Coils Coil 60 104 - -
Bda08g00275 662 MobiDBLite consensus disorder prediction 12 45 - -
Bda08g00275 662 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 131 - -
Bda08g00275 662 PANTHER SERINE/THREONINE-PROTEIN KINASE 177 603 - -
Bda08g00275 662 SMART serkin_6 169 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00275 662 Gene3D Phosphorylase Kinase; domain 1 56 135 - -
Bda08g00275 662 SMART pkinase_C_6 502 566 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda08g00275 662 Pfam Protein kinase C terminal domain 520 564 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bda08g00275 662 MobiDBLite consensus disorder prediction 12 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00487 Bda-Chr2:45741741 Bda08g00275 Bda-Chr8:2863373 0 dispersed
Bda04g00643 Bda-Chr4:55190617 Bda08g00275 Bda-Chr8:2863373 0 dispersed
Bda08g00275 Bda-Chr8:2863373 Bda09g01079 Bda-Chr9:41210689 0 dispersed
Bda15g00561 Bda-Chr15:8745370 Bda08g00275 Bda-Chr8:2863373 4.84E-10 dispersed
Bda08g00275 Bda-Chr8:2863373 Bda10g00636 Bda-Chr10:40402956 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69757 PF00069 Pkinase 4.10E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00275 K08790 - qsu:112030601 934.095