Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00300 ATGGCGTCCTCCATGGCTAGGCGGTCATTTGCTTCTATTCTTACCAGAACTCTTCGCTCCCCTTCTTCCTCTCCGTCTTTTTCTTTATCTTCTCGCTCCCGCTTTGCTTTCGCGATTTTCAACGAAAAAGCGCCATTAATTCCTGACTCGACTAATATCCCCATTCGATTCAAGACTTCCGGGTCGGGATATTCGCCCCTTAATGATCCGTCTCCGAACTGGAGCAATCGGCCGCCGAAAGAGACGATCCTTCTCGATGGCTGTGACTATGAACATTGGCTCATTGTTTTGGAGTTTCCAAAAGACTCTAAGCCCTCGGAACCGAGTCCATCTCGAATCTTTGATGAGTTGCCTAGGGCCACCATAGTCTCCGTCTCTCGCCCCGATGCTGCTGATTTCAGCCCCATGCTTCTCTCTTACTTGATCGAGTTTCAATACAAGCAGCTCTCGCTCTTTTTTCATTATTTTTATCCATTCAAATGGCGCTTACTAAAGAAGGCTTCACATGTATTTTATCTACACTTTGCCTTAAAGAAACGTGCTTTTATCGAGGAAATTCAAGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTGGGAATAGGAGATCATGCAGCAGTTGTACAAGATGACGATGAACCGGATGATGAGGTCGGTTTTTTATCCAGAAATGTCCCATCCAGAGCTGTCCTACCGGTAATTCGACCTGCACTAGGAAGGCAGCATTCCATATCAGAGAGAGCCAAGGTTGCAATGCAAGGGTACCTAAACCATTTCTTAGGGAATATGGACATTGTTAATTCGCGAGAGGTTTGCAGGTTTATGGAGGTTTCGAAGCTTTCATTTTCACCAGAGTATGGCCCTAAGTTAAAAGAAGATTATGTCATGGTGAAACATCTCCCACCAATACCAAAGAATGATGATTCCAGTACGTGCTGTGCATGCTGTTGGTCTAGTTGTTGCAATGATAATTGGCAAAAGGTTTGGGCTGTACTAAAACCTGGATTTCTAGCCTTGTTGGGAGATCCTTATGATATGCAACCATTAGATATTATTGTGTTTGATGTGCTACCATCCTCAGATGGAAATGGAGAAGGACGGCTTTCACTAGCCAACGAAATTAAAGAAAGGAATCCTCTACGGAATGCATTTAAGGTTACTTGTGGCAACCGAAACATTAGGTTAAGAACAAAAGGTGGTGCTAAAGTTAAAGACTGGGTTGCTGCAATAAATGATGCAGGACTGAGGCCTCCTGAGGGGTGGTGTTACCCTCACCGCTTTGGTTCATTTGCTCCTCCCAGAGGTTTGATAGAAGATGGTAGTCAGGCTCAGTGGTTTGTCGATGGTGGAGCAGCATTTGAGGCTATCACTGCTTCAATTGAGGATGCAAAATCGGAGATTTTTATTTGTGGCTGGTGGGTCTGTCCGGAGCTGTATCTAATCTATATTCTACTGTATAAGGAGGTTGCTCTAGCTCTAAAGATCAACAGTGTATATAGCAAGAGAAAACTTCTTAGCATCCATGAGAATGTGAGAGTACTACGATATCCTGACCACTTTTCTTGTGGTGTCTACCTATGGTCCCACCATGAAAAAATTGTCATTGTTGATCATCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGATATGACACACCTGAACATAAAGTGGGAGATTTTCCTCCGTTGGTGTGGAAAGGAAAAGACTATTATAACCCTAGGGAATCTGAACCAAATTCATGGGAGGATACGATGAAAGATGAGTTGGATCGGGGAAAATATCCTCGTATGCCTTGGCATGATGTGCATTGTGCCCTATGGGGACCACCATGCCGTGATGTAGCAAGGCATTTTGTCCAACGCTGGAATTATGCAAAGAGAAATAAAGCCCCAAATGAGCAAGCAATTCCACTACTTATGCCTCAGCACCACATGGTTATTCCACATTACTGGGGACAGAGTAGAGAGCTGGAAGATGAACAGCAGAATTTAAACGCGTCGAAAGACAATAAAAAACTGGATTCTTTCTCGTCTCGCTCCTCATTTCAAGATATTCCACTGCTTTTGCCGCAAGAGGCTGATGGACTAGGTTCTGAAATTAAAGACCCAAAGTCTACAGTGGAAGATTCTGCTTCTAATTTTCCAAGTCAGGCCAACAAGGCTAATGGTAGTCTTCCTTTTCCTTTCCGGAAGTCTAAAGGTGATCAACTTGGTACGGCTTTGCCAATGAAAGGCTTTGTTGATGATTTTGACACTTCGGATTGTCATGGGAAAACGATGGGAGAGGGAGTAACACAAAATGGCATAAGAAATTCAAATCCGGAGTGGTGGGAAACACAAGAGAGGGGAGATCAAGGTGGTTTGATGAATGAATGTGGACAAGTTGGTCCTCGTTCCTCGTGCCGCTGTCAGGTTATTAGAAGTGTCAGTCAATGGTCTGCTGGAACAAGCCAAACTGAAGAAAGCATTCACATTGCTTATTGTTCTCTTATAGAAAAAGCTGAACATTTTATTTATATCGAGAATCAATTTTTCATATCAGGTCTTTCAGGGGATGAGATAATACGCAACCGTGTATTAGAAGCACTTTATCGTCGAATTATGAGAGCTTACAATGATCAGAAGATTTTTAGGGTTATTATTATTATACCACTTTTACCAGGTTTCCAGGGGGGTCTGGATGATAGCGGTGCAGCATCAGTGAGAGCCATAATGCATTGGCAGTACCGAACAATATGTAGAGGAAATAGTTCGATACTGCATAATTTGTATGATCTTCTTGGTTCTAAAGCCCATGATTACATTTCATTCTATGGTGTCAGAGCCTATGGCAGACTTTATGATGGTGGTCCAGTTTACGTTCATAGCAAAATCCTCATTGTTGACGATTCCACTGCATTGATTGGATCTGCTAACATTAATGATAGGAGTTTACTTGGTTCGAGGGATTCTGAGATTGGTATCGCCATCGAAGATAAAGAGCTAGTTACTTCTCAAATGGGAGGACAACCATGGCAAGCTGGAAGATTTTGTTTGAGTCTTCGGCTGTCGCTATGGGCGGAGCACCTTGGTCTTCGTCCCGGACAGATTAATCAAATTGTGGACCCTATTGCTGATTCAACGTATAAGGACATATGGATGGCAACTGCTAAGTCAAATACCACAATCTACCAGGATGTGTTTTCTTGTATACCAAATGACCTTGTCCATTCCAGAGCGGCCCTACGACAAAGCATGGCATCTTGGAAAGAGAAACTGGGTCACACTACGATAGACTTGGGAATTGCACCAGAGAAACTAGAGTACTTACAGAATGGAGATATAAAGAAGATCGATCCAATTGAGAGACTGGAAGCAGTGAAAGGGCATCTCGTTTCTTTCCCTTTGGAGTTCATGTGCCAAGAAGACCTGAGACCTGTTTTCAATGAGAGTGAGTATTATGCTTCCCAAGTCTTCCATTAA 3474 43.03 MASSMARRSFASILTRTLRSPSSSPSFSLSSRSRFAFAIFNEKAPLIPDSTNIPIRFKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPKDSKPSEPSPSRIFDELPRATIVSVSRPDAADFSPMLLSYLIEFQYKQLSLFFHYFYPFKWRLLKKASHVFYLHFALKKRAFIEEIQEKQEQVKEWLQNLGIGDHAAVVQDDDEPDDEVGFLSRNVPSRAVLPVIRPALGRQHSISERAKVAMQGYLNHFLGNMDIVNSREVCRFMEVSKLSFSPEYGPKLKEDYVMVKHLPPIPKNDDSSTCCACCWSSCCNDNWQKVWAVLKPGFLALLGDPYDMQPLDIIVFDVLPSSDGNGEGRLSLANEIKERNPLRNAFKVTCGNRNIRLRTKGGAKVKDWVAAINDAGLRPPEGWCYPHRFGSFAPPRGLIEDGSQAQWFVDGGAAFEAITASIEDAKSEIFICGWWVCPELYLIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSCGVYLWSHHEKIVIVDHQICFIGGLDLCFGRYDTPEHKVGDFPPLVWKGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYWGQSRELEDEQQNLNASKDNKKLDSFSSRSSFQDIPLLLPQEADGLGSEIKDPKSTVEDSASNFPSQANKANGSLPFPFRKSKGDQLGTALPMKGFVDDFDTSDCHGKTMGEGVTQNGIRNSNPEWWETQERGDQGGLMNECGQVGPRSSCRCQVIRSVSQWSAGTSQTEESIHIAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLEALYRRIMRAYNDQKIFRVIIIIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGNSSILHNLYDLLGSKAHDYISFYGVRAYGRLYDGGPVYVHSKILIVDDSTALIGSANINDRSLLGSRDSEIGIAIEDKELVTSQMGGQPWQAGRFCLSLRLSLWAEHLGLRPGQINQIVDPIADSTYKDIWMATAKSNTTIYQDVFSCIPNDLVHSRAALRQSMASWKEKLGHTTIDLGIAPEKLEYLQNGDIKKIDPIERLEAVKGHLVSFPLEFMCQEDLRPVFNESEYYASQVFH 1157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3135500 3153925 + Bda024735.1 Bda08g00300 11156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00300 1157 MobiDBLite consensus disorder prediction 699 732 - -
Bda08g00300 1157 SUPERFAMILY Phospholipase D/nuclease 410 646 - -
Bda08g00300 1157 CDD PLDc_vPLD1_2_yPLD_like_2 819 998 - -
Bda08g00300 1157 MobiDBLite consensus disorder prediction 711 727 - -
Bda08g00300 1157 Gene3D Endonuclease Chain A 783 1010 - -
Bda08g00300 1157 SUPERFAMILY Phospholipase D/nuclease 800 1002 - -
Bda08g00300 1157 CDD PH_PLD 267 414 - -
Bda08g00300 1157 PANTHER PHOSPHOLIPASE D 482 1154 IPR015679 -
Bda08g00300 1157 Coils Coil 179 199 - -
Bda08g00300 1157 PIRSF PLD_euk 91 481 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bda08g00300 1157 PIRSF PLD_euk 566 672 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bda08g00300 1157 PIRSF PLD_euk 652 1157 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bda08g00300 1157 PIRSF PLD_euk 482 569 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bda08g00300 1157 PANTHER PHOSPHOLIPASE D 106 481 IPR015679 -
Bda08g00300 1157 Pfam Phospholipase D Active site motif 526 553 IPR001736 GO:0003824
Bda08g00300 1157 PANTHER PHOSPHOLIPASE 106 481 - -
Bda08g00300 1157 Gene3D - 318 416 IPR011993 -
Bda08g00300 1157 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 954 981 IPR001736 GO:0003824
Bda08g00300 1157 SUPERFAMILY PH domain-like 321 414 - -
Bda08g00300 1157 PANTHER PHOSPHOLIPASE 482 1154 - -
Bda08g00300 1157 SMART pld_4 526 553 IPR001736 GO:0003824
Bda08g00300 1157 SMART pld_4 954 981 IPR001736 GO:0003824
Bda08g00300 1157 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 526 553 IPR001736 GO:0003824
Bda08g00300 1157 Gene3D Endonuclease Chain A 494 676 - -
Bda08g00300 1157 Pfam PLD-like domain 833 1001 IPR025202 -
Bda08g00300 1157 Coils Coil 658 678 - -
Bda08g00300 1157 SMART PH_update 290 418 IPR001849 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01281 Bda-Chr7:15658298 Bda08g00300 Bda-Chr8:3135500 3.65E-156 dispersed
Bda08g00300 Bda-Chr8:3135500 Bda10g00858 Bda-Chr10:43057432 7.62E-11 dispersed
Bda08g00300 Bda-Chr8:3135500 Bda04g00828 Bda-Chr4:58155369 1.54E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00300 K01115 - qsu:112006006 1695.63