Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00300 | ATGGCGTCCTCCATGGCTAGGCGGTCATTTGCTTCTATTCTTACCAGAACTCTTCGCTCCCCTTCTTCCTCTCCGTCTTTTTCTTTATCTTCTCGCTCCCGCTTTGCTTTCGCGATTTTCAACGAAAAAGCGCCATTAATTCCTGACTCGACTAATATCCCCATTCGATTCAAGACTTCCGGGTCGGGATATTCGCCCCTTAATGATCCGTCTCCGAACTGGAGCAATCGGCCGCCGAAAGAGACGATCCTTCTCGATGGCTGTGACTATGAACATTGGCTCATTGTTTTGGAGTTTCCAAAAGACTCTAAGCCCTCGGAACCGAGTCCATCTCGAATCTTTGATGAGTTGCCTAGGGCCACCATAGTCTCCGTCTCTCGCCCCGATGCTGCTGATTTCAGCCCCATGCTTCTCTCTTACTTGATCGAGTTTCAATACAAGCAGCTCTCGCTCTTTTTTCATTATTTTTATCCATTCAAATGGCGCTTACTAAAGAAGGCTTCACATGTATTTTATCTACACTTTGCCTTAAAGAAACGTGCTTTTATCGAGGAAATTCAAGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTGGGAATAGGAGATCATGCAGCAGTTGTACAAGATGACGATGAACCGGATGATGAGGTCGGTTTTTTATCCAGAAATGTCCCATCCAGAGCTGTCCTACCGGTAATTCGACCTGCACTAGGAAGGCAGCATTCCATATCAGAGAGAGCCAAGGTTGCAATGCAAGGGTACCTAAACCATTTCTTAGGGAATATGGACATTGTTAATTCGCGAGAGGTTTGCAGGTTTATGGAGGTTTCGAAGCTTTCATTTTCACCAGAGTATGGCCCTAAGTTAAAAGAAGATTATGTCATGGTGAAACATCTCCCACCAATACCAAAGAATGATGATTCCAGTACGTGCTGTGCATGCTGTTGGTCTAGTTGTTGCAATGATAATTGGCAAAAGGTTTGGGCTGTACTAAAACCTGGATTTCTAGCCTTGTTGGGAGATCCTTATGATATGCAACCATTAGATATTATTGTGTTTGATGTGCTACCATCCTCAGATGGAAATGGAGAAGGACGGCTTTCACTAGCCAACGAAATTAAAGAAAGGAATCCTCTACGGAATGCATTTAAGGTTACTTGTGGCAACCGAAACATTAGGTTAAGAACAAAAGGTGGTGCTAAAGTTAAAGACTGGGTTGCTGCAATAAATGATGCAGGACTGAGGCCTCCTGAGGGGTGGTGTTACCCTCACCGCTTTGGTTCATTTGCTCCTCCCAGAGGTTTGATAGAAGATGGTAGTCAGGCTCAGTGGTTTGTCGATGGTGGAGCAGCATTTGAGGCTATCACTGCTTCAATTGAGGATGCAAAATCGGAGATTTTTATTTGTGGCTGGTGGGTCTGTCCGGAGCTGTATCTAATCTATATTCTACTGTATAAGGAGGTTGCTCTAGCTCTAAAGATCAACAGTGTATATAGCAAGAGAAAACTTCTTAGCATCCATGAGAATGTGAGAGTACTACGATATCCTGACCACTTTTCTTGTGGTGTCTACCTATGGTCCCACCATGAAAAAATTGTCATTGTTGATCATCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGATATGACACACCTGAACATAAAGTGGGAGATTTTCCTCCGTTGGTGTGGAAAGGAAAAGACTATTATAACCCTAGGGAATCTGAACCAAATTCATGGGAGGATACGATGAAAGATGAGTTGGATCGGGGAAAATATCCTCGTATGCCTTGGCATGATGTGCATTGTGCCCTATGGGGACCACCATGCCGTGATGTAGCAAGGCATTTTGTCCAACGCTGGAATTATGCAAAGAGAAATAAAGCCCCAAATGAGCAAGCAATTCCACTACTTATGCCTCAGCACCACATGGTTATTCCACATTACTGGGGACAGAGTAGAGAGCTGGAAGATGAACAGCAGAATTTAAACGCGTCGAAAGACAATAAAAAACTGGATTCTTTCTCGTCTCGCTCCTCATTTCAAGATATTCCACTGCTTTTGCCGCAAGAGGCTGATGGACTAGGTTCTGAAATTAAAGACCCAAAGTCTACAGTGGAAGATTCTGCTTCTAATTTTCCAAGTCAGGCCAACAAGGCTAATGGTAGTCTTCCTTTTCCTTTCCGGAAGTCTAAAGGTGATCAACTTGGTACGGCTTTGCCAATGAAAGGCTTTGTTGATGATTTTGACACTTCGGATTGTCATGGGAAAACGATGGGAGAGGGAGTAACACAAAATGGCATAAGAAATTCAAATCCGGAGTGGTGGGAAACACAAGAGAGGGGAGATCAAGGTGGTTTGATGAATGAATGTGGACAAGTTGGTCCTCGTTCCTCGTGCCGCTGTCAGGTTATTAGAAGTGTCAGTCAATGGTCTGCTGGAACAAGCCAAACTGAAGAAAGCATTCACATTGCTTATTGTTCTCTTATAGAAAAAGCTGAACATTTTATTTATATCGAGAATCAATTTTTCATATCAGGTCTTTCAGGGGATGAGATAATACGCAACCGTGTATTAGAAGCACTTTATCGTCGAATTATGAGAGCTTACAATGATCAGAAGATTTTTAGGGTTATTATTATTATACCACTTTTACCAGGTTTCCAGGGGGGTCTGGATGATAGCGGTGCAGCATCAGTGAGAGCCATAATGCATTGGCAGTACCGAACAATATGTAGAGGAAATAGTTCGATACTGCATAATTTGTATGATCTTCTTGGTTCTAAAGCCCATGATTACATTTCATTCTATGGTGTCAGAGCCTATGGCAGACTTTATGATGGTGGTCCAGTTTACGTTCATAGCAAAATCCTCATTGTTGACGATTCCACTGCATTGATTGGATCTGCTAACATTAATGATAGGAGTTTACTTGGTTCGAGGGATTCTGAGATTGGTATCGCCATCGAAGATAAAGAGCTAGTTACTTCTCAAATGGGAGGACAACCATGGCAAGCTGGAAGATTTTGTTTGAGTCTTCGGCTGTCGCTATGGGCGGAGCACCTTGGTCTTCGTCCCGGACAGATTAATCAAATTGTGGACCCTATTGCTGATTCAACGTATAAGGACATATGGATGGCAACTGCTAAGTCAAATACCACAATCTACCAGGATGTGTTTTCTTGTATACCAAATGACCTTGTCCATTCCAGAGCGGCCCTACGACAAAGCATGGCATCTTGGAAAGAGAAACTGGGTCACACTACGATAGACTTGGGAATTGCACCAGAGAAACTAGAGTACTTACAGAATGGAGATATAAAGAAGATCGATCCAATTGAGAGACTGGAAGCAGTGAAAGGGCATCTCGTTTCTTTCCCTTTGGAGTTCATGTGCCAAGAAGACCTGAGACCTGTTTTCAATGAGAGTGAGTATTATGCTTCCCAAGTCTTCCATTAA | 3474 | 43.03 | MASSMARRSFASILTRTLRSPSSSPSFSLSSRSRFAFAIFNEKAPLIPDSTNIPIRFKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPKDSKPSEPSPSRIFDELPRATIVSVSRPDAADFSPMLLSYLIEFQYKQLSLFFHYFYPFKWRLLKKASHVFYLHFALKKRAFIEEIQEKQEQVKEWLQNLGIGDHAAVVQDDDEPDDEVGFLSRNVPSRAVLPVIRPALGRQHSISERAKVAMQGYLNHFLGNMDIVNSREVCRFMEVSKLSFSPEYGPKLKEDYVMVKHLPPIPKNDDSSTCCACCWSSCCNDNWQKVWAVLKPGFLALLGDPYDMQPLDIIVFDVLPSSDGNGEGRLSLANEIKERNPLRNAFKVTCGNRNIRLRTKGGAKVKDWVAAINDAGLRPPEGWCYPHRFGSFAPPRGLIEDGSQAQWFVDGGAAFEAITASIEDAKSEIFICGWWVCPELYLIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSCGVYLWSHHEKIVIVDHQICFIGGLDLCFGRYDTPEHKVGDFPPLVWKGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYWGQSRELEDEQQNLNASKDNKKLDSFSSRSSFQDIPLLLPQEADGLGSEIKDPKSTVEDSASNFPSQANKANGSLPFPFRKSKGDQLGTALPMKGFVDDFDTSDCHGKTMGEGVTQNGIRNSNPEWWETQERGDQGGLMNECGQVGPRSSCRCQVIRSVSQWSAGTSQTEESIHIAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLEALYRRIMRAYNDQKIFRVIIIIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGNSSILHNLYDLLGSKAHDYISFYGVRAYGRLYDGGPVYVHSKILIVDDSTALIGSANINDRSLLGSRDSEIGIAIEDKELVTSQMGGQPWQAGRFCLSLRLSLWAEHLGLRPGQINQIVDPIADSTYKDIWMATAKSNTTIYQDVFSCIPNDLVHSRAALRQSMASWKEKLGHTTIDLGIAPEKLEYLQNGDIKKIDPIERLEAVKGHLVSFPLEFMCQEDLRPVFNESEYYASQVFH | 1157 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3135500 | 3153925 | + | Bda024735.1 | Bda08g00300 | 11156 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00300 | 1157 | MobiDBLite | consensus disorder prediction | 699 | 732 | - | - | |
Bda08g00300 | 1157 | SUPERFAMILY | Phospholipase D/nuclease | 410 | 646 | - | - | |
Bda08g00300 | 1157 | CDD | PLDc_vPLD1_2_yPLD_like_2 | 819 | 998 | - | - | |
Bda08g00300 | 1157 | MobiDBLite | consensus disorder prediction | 711 | 727 | - | - | |
Bda08g00300 | 1157 | Gene3D | Endonuclease Chain A | 783 | 1010 | - | - | |
Bda08g00300 | 1157 | SUPERFAMILY | Phospholipase D/nuclease | 800 | 1002 | - | - | |
Bda08g00300 | 1157 | CDD | PH_PLD | 267 | 414 | - | - | |
Bda08g00300 | 1157 | PANTHER | PHOSPHOLIPASE D | 482 | 1154 | IPR015679 | - | |
Bda08g00300 | 1157 | Coils | Coil | 179 | 199 | - | - | |
Bda08g00300 | 1157 | PIRSF | PLD_euk | 91 | 481 | IPR016555 | GO:0004630|GO:0006654|GO:0048017 | |
Bda08g00300 | 1157 | PIRSF | PLD_euk | 566 | 672 | IPR016555 | GO:0004630|GO:0006654|GO:0048017 | |
Bda08g00300 | 1157 | PIRSF | PLD_euk | 652 | 1157 | IPR016555 | GO:0004630|GO:0006654|GO:0048017 | |
Bda08g00300 | 1157 | PIRSF | PLD_euk | 482 | 569 | IPR016555 | GO:0004630|GO:0006654|GO:0048017 | |
Bda08g00300 | 1157 | PANTHER | PHOSPHOLIPASE D | 106 | 481 | IPR015679 | - | |
Bda08g00300 | 1157 | Pfam | Phospholipase D Active site motif | 526 | 553 | IPR001736 | GO:0003824 | |
Bda08g00300 | 1157 | PANTHER | PHOSPHOLIPASE | 106 | 481 | - | - | |
Bda08g00300 | 1157 | Gene3D | - | 318 | 416 | IPR011993 | - | |
Bda08g00300 | 1157 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 954 | 981 | IPR001736 | GO:0003824 | |
Bda08g00300 | 1157 | SUPERFAMILY | PH domain-like | 321 | 414 | - | - | |
Bda08g00300 | 1157 | PANTHER | PHOSPHOLIPASE | 482 | 1154 | - | - | |
Bda08g00300 | 1157 | SMART | pld_4 | 526 | 553 | IPR001736 | GO:0003824 | |
Bda08g00300 | 1157 | SMART | pld_4 | 954 | 981 | IPR001736 | GO:0003824 | |
Bda08g00300 | 1157 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 526 | 553 | IPR001736 | GO:0003824 | |
Bda08g00300 | 1157 | Gene3D | Endonuclease Chain A | 494 | 676 | - | - | |
Bda08g00300 | 1157 | Pfam | PLD-like domain | 833 | 1001 | IPR025202 | - | |
Bda08g00300 | 1157 | Coils | Coil | 658 | 678 | - | - | |
Bda08g00300 | 1157 | SMART | PH_update | 290 | 418 | IPR001849 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01281 | Bda-Chr7:15658298 | Bda08g00300 | Bda-Chr8:3135500 | 3.65E-156 | dispersed | |
Bda08g00300 | Bda-Chr8:3135500 | Bda10g00858 | Bda-Chr10:43057432 | 7.62E-11 | dispersed | |
Bda08g00300 | Bda-Chr8:3135500 | Bda04g00828 | Bda-Chr4:58155369 | 1.54E-11 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00300 | K01115 | - | qsu:112006006 | 1695.63 |