Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00304 | ATGAATCTGAATCACGGCAAGGCATCGATGCCTACAGCCGTTTGTAGTGCTGCTCTTAAATCCGGCGAAGTTGTTTCCGACCAATTTCCGGCTGGTCTGCGAGTTCTGGTCGTCGATGACGATCCGACCTGCCTGAGAATCTTGGATAAGATGCTTCAATTTTGTCTCTACCACGTTTCTATGTGCAATCGAGCCGAGACTGCGTTGTCTAAGCTTCGAGATAACAAAAATGGATTCGATATCGTAATTAGTGATGTCCATATGCCGGACATGGATGGATTTAAGCTCTTAGAGCACATTGGCCTAGAAATGGACCTACCAGTTATCATGATGTCTGCCGATGAAAGCAAAGATGTTGTCATGAAGGGAGTTACTCACGGAGCTTGCGATTATTTAATAAAACCTGTTCGAATTGAAGCTTTGAAGAACATATGGCAACATGTAGTTCGGAGGAGGAAGAATGAGTGGAAGGATCTAGAACAATCCGGAAGTGTGGAAGACGGGGATCGGCAACCAAAACTGTGCGATGACGCGGATTACTCGTCCTCGTTAAATGATGGAAGTTGCAAAAGCTCGAAGAGGAGGAAAGACGATGAAGAAGAAGCTGAGGAACGAGATGATTCGTCGACGTTGAAGAAGCCACGCGTGGTTTGGTCGGTCGAGCTTCATCAGCAGTTTGTCGCAGCTGTTAATCAACTCGGCATTGACAAGGCCGTTCCTAAGAAAATTTTGGAGCTGATGAATGTTCCGGGACTCACTAGAGAAAATGTTGCCAGTCATCTTCAGAAATATCGGTTGTATCTAAGAAGGCTAAGCGGAGTCGCACAATACCCTAGTAATTTGAACAATTCCTTCATCAACCCACAAGAAGCAATTTTCGGGCCAGTTTCAGCGTTCAACGAGATCAATCTTCAGGCTCTTGCCATGACAGGAAAACTCACACTCCAAAGTCTCGCCTCGCTTCAAGCTGCCGGCCTGAGTAGATCTTCTTCATCAAAATCCGGCGTAATTTCCGATCAACAGAAAATATTTAGTTTTGAGAATCCCAAACTGAGATTTGGTGAGGCCCAGCCTCAGCATCTCAACAGTAGTAAACCAATAAATTTACTGCATGGAATTCCCACCACCATGGAAGCAAAGCAGCTTGCAAATTTGAACCATGGAAGCATAAATATGCAAGGTAATATCCATGGAGGCCAAAACAACTCTTTATTAACCCAGATGACTCAACCTCAATCATCAATCAGACAGTCTGTTAGAATTCCAGGTGGGGTTCCGAAGAACAATTTGATTCCGCCAGAATCGTCTATCTTCAGTTTTCCGGCGAACCAAACAGCTGAATTCCCGGGAAATAATTTGCCTCTTCAAACGGCTCCATCTAAAGGGCCATTCTTGGAAGAATCAAATCTAGAAACAAAACAATCAGGAAGATTTGTATCAAATTATGATATATTAGATGATTTGCAGAATCCCAGTTTGAACTTCAATGCCTCTCAAGGCAACCTGAATATCTCATCTTCGGGTTTATATCATCAAAGCTTTCCCTCCGGCCAAAGGATCAGACAAGAAAGCGATGTTTCTACAGCTCGACCTGAGAACGGACAGATCATTAGACAGCAACTAAATTCTGTTCTTTTTGACAATCCGGTGAGGGTTAAAGCCGAGACAATCCCAGATCCAAGCTGCGTCTTATTCCCTGAAAACTTCATTCGGGACGATCTAATGAGTACCCTTTTCAGACAAGTTAGTTTCCTACAACTTTTCTTCTCTGTTTGTTTTCGATGA | 1785 | 43.7 | MNLNHGKASMPTAVCSAALKSGEVVSDQFPAGLRVLVVDDDPTCLRILDKMLQFCLYHVSMCNRAETALSKLRDNKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADESKDVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRRRKNEWKDLEQSGSVEDGDRQPKLCDDADYSSSLNDGSCKSSKRRKDDEEEAEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVAQYPSNLNNSFINPQEAIFGPVSAFNEINLQALAMTGKLTLQSLASLQAAGLSRSSSSKSGVISDQQKIFSFENPKLRFGEAQPQHLNSSKPINLLHGIPTTMEAKQLANLNHGSINMQGNIHGGQNNSLLTQMTQPQSSIRQSVRIPGGVPKNNLIPPESSIFSFPANQTAEFPGNNLPLQTAPSKGPFLEESNLETKQSGRFVSNYDILDDLQNPSLNFNASQGNLNISSSGLYHQSFPSGQRIRQESDVSTARPENGQIIRQQLNSVLFDNPVRVKAETIPDPSCVLFPENFIRDDLMSTLFRQVSFLQLFFSVCFR | 594 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3176640 | 3179261 | + | Bda024739.1 | Bda08g00304 | 11160 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00304 | 594 | Pfam | Response regulator receiver domain | 35 | 143 | IPR001789 | GO:0000160 | |
Bda08g00304 | 594 | CDD | REC_typeB_ARR-like | 35 | 149 | - | - | |
Bda08g00304 | 594 | MobiDBLite | consensus disorder prediction | 189 | 210 | - | - | |
Bda08g00304 | 594 | SUPERFAMILY | Homeodomain-like | 210 | 270 | IPR009057 | - | |
Bda08g00304 | 594 | SMART | REC_2 | 33 | 145 | IPR001789 | GO:0000160 | |
Bda08g00304 | 594 | Gene3D | - | 33 | 166 | - | - | |
Bda08g00304 | 594 | SUPERFAMILY | CheY-like | 32 | 156 | IPR011006 | - | |
Bda08g00304 | 594 | Gene3D | - | 210 | 272 | - | - | |
Bda08g00304 | 594 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 9 | 413 | IPR045279 | GO:0009736 | |
Bda08g00304 | 594 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 213 | 266 | IPR006447 | GO:0003677 | |
Bda08g00304 | 594 | MobiDBLite | consensus disorder prediction | 156 | 210 | - | - | |
Bda08g00304 | 594 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 212 | 269 | IPR017930 | - | |
Bda08g00304 | 594 | MobiDBLite | consensus disorder prediction | 156 | 176 | - | - | |
Bda08g00304 | 594 | Pfam | Myb-like DNA-binding domain | 215 | 265 | IPR001005 | - | |
Bda08g00304 | 594 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 9 | 413 | - | - | |
Bda08g00304 | 594 | ProSiteProfiles | Response regulatory domain profile. | 34 | 149 | IPR001789 | GO:0000160 | |
Bda08g00304 | 594 | PIRSF | RR_ARR_type-B | 15 | 561 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g01158 | Bda08g00304 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01795 | Bda-Chr1:54160869 | Bda08g00304 | Bda-Chr8:3176640 | 8.04E-127 | dispersed | |
Bda07g01879 | Bda-Chr7:36209687 | Bda08g00304 | Bda-Chr8:3176640 | 1.18E-49 | dispersed | |
Bda08g00304 | Bda-Chr8:3176640 | Bda11g00187 | Bda-Chr11:2406265 | 4.81E-132 | dispersed | |
Bda03g00918 | Bda-Chr3:8109038 | Bda08g00304 | Bda-Chr8:3176640 | 1.63E-44 | transposed | |
Bda03g01158 | Bda-Chr3:12761839 | Bda08g00304 | Bda-Chr8:3176640 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16251 | PF00072 | Response_reg | 3.50E-22 | CL0304 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00304 | - | K14491 | tcc:18603588 | 691.804 |