Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00305 ATGGACTTGAAGCTCTTATTCAAGTTGTTGGCCATTTTAGCTGCTTTTCCCTTTTCTTCTTCTCAAGAGGCTGACGCTCCTTCGCCGGCCTCCGATTCCTGCAATGGTATTTTCTTAAGCTATAGCTACACGGATGGAGCGAAGATCCCCCCGGATCTCAAAACGAATCTTGCTAACCAGCCGTACCGATTCGAATCTGTTCTCACTGTTCTGAACAACGGGCTGGAAGAGCTCAAATCATGGCGGGTTTTCGTAGGGTTTCACAATAATGAGTTGTTGGTTTCTGCTTCGAACGCAGTGCTGGCAGATGGGAGTACACTTCCAGCTCTTGTTGGAAACGGCACCGTTTTCGCGGGGTTTCCTTCGACAGACCTGAAGACCGCGGTTGAGACCGCCGGAGACTTGACTCAGATGCAGGTTCAGGTCAATTTGGTCGGAACACAGTTTGGTGTTGCATCTCCGGCGATTCCGATGCCGTTGAATATATCTCTTGTCAACGATGGCTACGCTTGTCAACATTTAACTCTCCAAGGGACGAGAGAAATGCAAGTTTGCTGTATTCCAGACACAACTGTCAAAACAAACATAAGTATAAGCGACGAGTTCTTGCCTCGCCAAGATGGTGATCTTATAATCATGTACGATGTTACAAAAACATATGACTCGAGTTATTGGACGCAAGTAACAATCTCTAATCACAACCCTCTCGGCCGTTTGGATAGTTGGAAGCTAAGCTGGGATTGGATGATGGGTGAATTCATTTTCTCCATGAGAGGAGCTTATCCTTCTGTTGTTGATTCTTCAGAGTGTATATTCGGCCCTCAAGGAATCCATTATCAGGGCACGGACTTTTCCGAGGTTTTGAATTGTGAAAGGCGGCCAACTATAGTCGATCTGCCACTTACTAAGGCTAATGACACAAACCTTGGATATGTCCCGTATTGTTGCCGGAACGGAACGATCCTGCCTCCCCACATGGATCCTAGCAAGTCGATCTCATCATTTCAAATGCAAGTTTTCAAAATGCCACCAGAGCTGAACCGATCTCAGTTGACACCTCCACAAAACTGGAAAATCAATGGCAGCCTCAATCCTAGCTATCTTTGTGGCCCTCCGATCAGGGTCAGTCCGAGCCAATTCCCTAGCCCAACTGGGCTGCCTTCTCTAACCACAGCAGTGGCTAGTTGGCAGGTTGTTTGCAATATCACTCGGACTAAGTCAGCCATCCCAAAATGCTGCGTTTCGTTCTCTGCCTATTACAACGAGTCAGTGATCCCTTGCCGGACTTGTGCATGTGGGTGTCCGAGCAACACGAGCCGGACGTGCAGCTCGACTACACCAGCAATGCTTCTTCCGGCCGAGGCTCTTCTCGTCCCCTTCGACAATCGAACCGAAAAAGCATTGGCCTGGGCTGCACTGAAGCACTTTCCGGTTCCAAATCCGACGCCTTGTGGCGATAATTGCGGAGTGAGTATAAATTGGCACGTTTATACGGATTATTCGAGTGGATGGAGTGCTAGAATTACCCTTTTCAATTGGGACGACTTCGATTTTGCCGATTGGTTCGTCGCCGTGGAGATGAACAAAACGGCCCCAGGATTTCAAGCGATGTACTCCTTCAACGGGACGACTTTGGAGCTAGATGGAACGAATAACACTGTTTTCATGCAGGGTCTTCCGGGATTGAACTATTTAGTGGGGGAGAGAGACGGCGATAACCCGGAGAAGGATCCGAGAGTGCCGGGGAAACAACAATCCGTGATTTCTTTTACAAAGAAAAACATTCAAGGAATTAATGTTCCGGCCGGAGATGGGTTTCCTTCAAAAGTGTTCTTCAATGGAGAGGAATGTTCGATTCCTCAATGGCTCCCAAGCAAGGCAAGTTTGAAGGGTCCAGCTTCATTTTTCTCTCTCCTCTCAATTCTTATGATCCTGTTTCTTCTATGA 1947 47.82 MDLKLLFKLLAILAAFPFSSSQEADAPSPASDSCNGIFLSYSYTDGAKIPPDLKTNLANQPYRFESVLTVLNNGLEELKSWRVFVGFHNNELLVSASNAVLADGSTLPALVGNGTVFAGFPSTDLKTAVETAGDLTQMQVQVNLVGTQFGVASPAIPMPLNISLVNDGYACQHLTLQGTREMQVCCIPDTTVKTNISISDEFLPRQDGDLIIMYDVTKTYDSSYWTQVTISNHNPLGRLDSWKLSWDWMMGEFIFSMRGAYPSVVDSSECIFGPQGIHYQGTDFSEVLNCERRPTIVDLPLTKANDTNLGYVPYCCRNGTILPPHMDPSKSISSFQMQVFKMPPELNRSQLTPPQNWKINGSLNPSYLCGPPIRVSPSQFPSPTGLPSLTTAVASWQVVCNITRTKSAIPKCCVSFSAYYNESVIPCRTCACGCPSNTSRTCSSTTPAMLLPAEALLVPFDNRTEKALAWAALKHFPVPNPTPCGDNCGVSINWHVYTDYSSGWSARITLFNWDDFDFADWFVAVEMNKTAPGFQAMYSFNGTTLELDGTNNTVFMQGLPGLNYLVGERDGDNPEKDPRVPGKQQSVISFTKKNIQGINVPAGDGFPSKVFFNGEECSIPQWLPSKASLKGPASFFSLLSILMILFLL 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3180030 3182208 - Bda024740.1 Bda08g00305 11161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00305 648 Pfam COBRA-like protein 224 403 IPR006918 GO:0010215|GO:0031225
Bda08g00305 648 PANTHER COBRA-LIKE PROTEIN 7 9 646 - -
Bda08g00305 648 PANTHER COBRA-LIKE PROTEIN 7 9 646 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01159 Bda08g00305 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00305 Bda-Chr8:3180030 Bda12g00205 Bda-Chr12:2018623 1.59E-34 dispersed
Bda12g00896 Bda-Chr12:39694223 Bda08g00305 Bda-Chr8:3180030 0 transposed
Bda03g01159 Bda-Chr3:12772776 Bda08g00305 Bda-Chr8:3180030 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00305 - - csv:101209258 984.171