Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda08g00328 | ATGGCGTCATCTCTGATTTTGAATCCAGTGATTAACTCTGACCGCTCACGTGAATCTTCCAGAAGGAAAAAAAAGAAGAAAACTCAAATGAACCTAGATCGTAATCGAGATCAGAGCAATATCAAATGGAAATCTGAAGTGCAGCAGCAAATCTACACGTCCAAGCTCGTTCAAGCGCTGAGCCGAGTGAGGCTCAGCCCCTCCGTTTCGTCTCCGAGCGAAGCTCCTCGCCTCGGCCAGGCTGTCCGCGAAGCCGCCGATGGAGTCTTAGCCGTTGCTGCGAAGGGGAAAACTCTATGGAGCAGATCGATCTTAACGAACCGTCTGAAGCTCAAATTCTCGAAGCGGAGAAGGCGGAGAGTCTCCTCCACTGCGAATAACCGCTCAAAGAAACCCCGAGTGAGCGTTTTGCGTTTGAAAGGCAAGTCTCCACCTGCGGTTGAGAGAAGAGTTCGGCTTCTCGGACGTTTGGTTCCCGGTTGCAGGAAGCAACCGTGTCCGGTGATTCTAGAAGAAGCCACTGATTATATAGCCGCCCTTGAGATGCAGGTCCGAGCCATGACTGCTCTCGCACAGTTAATCTCTGGTTCTGGTTCCTCCTCATCACCGCCAAGTTGA | 618 | 51.62 | MASSLILNPVINSDRSRESSRRKKKKKTQMNLDRNRDQSNIKWKSEVQQQIYTSKLVQALSRVRLSPSVSSPSEAPRLGQAVREAADGVLAVAAKGKTLWSRSILTNRLKLKFSKRRRRRVSSTANNRSKKPRVSVLRLKGKSPPAVERRVRLLGRLVPGCRKQPCPVILEEATDYIAALEMQVRAMTALAQLISGSGSSSSPPS | 205 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 3391480 | 3392097 | - | Bda024767.1 | Bda08g00328 | 11184 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda08g00328 | 205 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 150 | 193 | IPR036638 | GO:0046983 | |
| Bda08g00328 | 205 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 7 | 202 | - | - | |
| Bda08g00328 | 205 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Bda08g00328 | 205 | MobiDBLite | consensus disorder prediction | 116 | 137 | - | - | |
| Bda08g00328 | 205 | CDD | bHLH_AtIBH1_like | 136 | 191 | IPR044549 | GO:0006355 | |
| Bda08g00328 | 205 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 7 | 202 | IPR044660 | GO:0006355 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda03g01187 | Bda-Chr3:14162899 | Bda08g00328 | Bda-Chr8:3391480 | 1.25E-89 | dispersed | |
| Bda08g00328 | Bda-Chr8:3391480 | Bda13g00222 | Bda-Chr13:2828727 | 3.30E-81 | dispersed | |
| Bda11g00495 | Bda-Chr11:5285786 | Bda08g00328 | Bda-Chr8:3391480 | 2.80E-69 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda08g00328 | - | - | vvi:100243127 | 204.142 |