Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00331 ATGCTTCAGGCATTGATGAATCTTCTCTCTCTATGCTGGAAGCCATTCGGCCATGATGGTGAAAGATTGGACTCTGTTGGAGTTTTCGGAGCCAATTCTGGTGGAAGAGATGGCAAAGATGGCTTGCTTTGGTTCCGTGATTTTGGCAATTACGCATCCGGCGAATTCTCCATGGCCGTGGTGCAGGCCAACCAGATTCTCGAGGACCAGAGTCAGATTGAATCGGGACCTTTTGGGACCTTCGTTGGCGTCTATGATGGACATGCCGGTCCCGAGGCTGCCCAATATGTTTGTGATAACTTGTTTGGGCATTTCCAAGCAATATCAACTGAATTGAATGGAGCTGTGACTCCCGAATCAATTCAGAATGCTTTTCGCCGAACAGAGGATGGGTTCACGACCTTTGTTTCAGAGCTATTGAGTACTCGGCCCCAGTTAGCAACTGTTGGAACTTGTTGTTTAGTTGGAATCATATGTCAACAGACTCTCTTTGTGGCAAACGTCGGAGACTCCCGGGTTGTACTGGGCAAAAAAGTTGGCATCACCGGCGAGATTGCTGCAATCCAGTTGTCAGCAGAACATAACGCAAATCAGGAAGATGTCAGGCGGGAATTGAAAGAACTTCATCCAAATGATCCTCAAATTGTTGTCCTCAAGCATGGAGTTTGGAGAGTAAAAGGCATCATACAGGTTTCTAGATCTATTGGCGATCTCTACTTGAAACATTCCCATTTCAACAATGAAAGGATTAATGGAAAATTCAGACTTCCTGAACCAATAAGCATGCCAATTTTAAGTTCTGTTCCGGAAATTATTACACATTCCATCCATCCAAATGACTCTTTTCTTATATTTGCATCTGATGGACTATGGGAACACTTGAGTAATGAAAAAGCTGTGGACATAGTTCATAGTCATCCACGTTCAGGAAGTGCAAAAAGGCTTGTGAAGGCTGCACTTCAAGAAGCAGCCAGAAAACGAGAAATGCGATACTCGGATCTTCGAAAAATTGACAAGAAGGTTAGACGCCATTTCCATGACGATATATCTGTCATTGTTTTATTCTTAAACCACAATCGGATATCCAGAGGCATGGGTCTTGACCGTCCATTATCAATTCGAAATGCTTCGGATCAA 1137 43.89 MLQALMNLLSLCWKPFGHDGERLDSVGVFGANSGGRDGKDGLLWFRDFGNYASGEFSMAVVQANQILEDQSQIESGPFGTFVGVYDGHAGPEAAQYVCDNLFGHFQAISTELNGAVTPESIQNAFRRTEDGFTTFVSELLSTRPQLATVGTCCLVGIICQQTLFVANVGDSRVVLGKKVGITGEIAAIQLSAEHNANQEDVRRELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDLYLKHSHFNNERINGKFRLPEPISMPILSSVPEIITHSIHPNDSFLIFASDGLWEHLSNEKAVDIVHSHPRSGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHNRISRGMGLDRPLSIRNASDQ 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3402194 3405089 - Bda033800 Bda08g00331 11187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00331 379 Pfam Protein phosphatase 2C 80 326 IPR001932 -
Bda08g00331 379 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Bda08g00331 379 CDD PP2Cc 56 356 IPR001932 -
Bda08g00331 379 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 377 - -
Bda08g00331 379 PANTHER ALPHABET, ISOFORM E-RELATED 3 377 - -
Bda08g00331 379 SUPERFAMILY PP2C-like 64 358 IPR036457 -
Bda08g00331 379 SMART PP2C_4 42 354 IPR001932 -
Bda08g00331 379 ProSiteProfiles PPM-type phosphatase domain profile. 52 356 IPR001932 -
Bda08g00331 379 Gene3D - 48 363 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01185 Bda08g00331 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00331 Bda-Chr8:3402194 Bda14g00960 Bda-Chr14:7730172 2.48E-155 dispersed
Bda15g00189 Bda-Chr15:4444598 Bda08g00331 Bda-Chr8:3402194 8.47E-53 dispersed
Bda03g01185 Bda-Chr3:14072695 Bda08g00331 Bda-Chr8:3402194 2.69E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00331 K01102 - zju:107419003 608.986