Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00332 ATGGAAGTTCCACCGGCTGAGGAGCTTTTGAGGAAGATCCATGAGCTCGAAGCGAGTCACGCTCAGCTAAAGGAAGAGATGACGAAGCTCTTACTATCTGGACCTACTCCAGATTTGAGAACCGACCGGAAAAGTCATCAGCACCACCGGTCGCATTCCATATCACCGCAACGGTCAAGGTTATCAGGGGGTAGAAGGAAAGGCGGTGGAGGTGAGGGTTTAGACGGTCCGAATGCTGCGACAGCTTGGAAGCAAGGCTCTGCTTCTTTTAAGCATTCATCTCCGCTTCAGAGGGAAAGCCGTAGTCACGATTCTCTATTCGTCGGTGAAGAAGACGAAGGAAGAAATGGAGGGTGTGGTGGTCCTTTACCGGTGAATTTCACTGATAGCCAATATCTGAATATTTTGCAGTCTATGGGGCAGTCTGTTTATATATTTGATCTAAATGGTCGAATTATCTACTGGAATCGAACTGCTGAAAAGACATTCGGGTATTCTGCGGCAGAAGCCCTTGGTCAGGATGTAATTGAGATTCTGGCTGATGCCCAAGATTATCCAGTAGCAAATGATATTGTCCGTCGTGTCACTTTAGGGGAGAGTTGGACTGGGCAGTTCCCTGTAAAGAACAGAAGGGGGGACAGATTTTTGGTCGTTGCAACCAATACCCCATTCTATGATGACAATAATGCCTTGATTGGTATTATTTGTGTATCGAGCAATTCCCAGTCGTTTGAGGAAGTCAAAGTTGGGTTGAGTCCAAAACATTCAGAACTCGATTCAAGCTATAGCCGACCCCGAAGTATTGTCAATACTAAACTTGGCCTTGATCCCCAACAGCCTTTACAAGTCGCTATTGCATCAAAAATATCTAACTTGGCATCCAAGGTAAGCAACAAAGTGAAGTCAAAGATACGGACAGGAGAAAATATCTCTGATCGTGAAGGTGGAAGTGGAGACAGTCATCATTCTGATCATGGTTTTGCTGATGGGGTTCGCCCTGATCATAGAGAAGATGCAAATTCAAGTGGAGGTAGCACGCCATGTGGAGATTTACCCCCTACTCCCTTTGGTGTATTTTCATCTATGGAGGAGAAGTCTGTTGGAAAATCCTCTAGAGAATCAGGTGATGATGGTGAAGAAAAGCCTGCAATTCACAAGATTATTACCTCAAAGGCGGAGGCATGGATTAGTAAGAAAGGCATATCATGGCCATGGAAAGGGAATGAACGAGAAGGATCAGAGGCAAGGAATACCCGTTTTGGTTGGCCCTGGCTGCACAATGATCAAGAGGCAGAATTACAGAACTACAAGGATTCATCATCTGGATTGAAACAAGAGAACCAAACAAATGAAGGTAATCGTGTGGTCAATAATGAGGCTTCAGGATCTTGGTCATCATTCAATGTTAACAGTACAAGCAGCGCGAGCAGCTGTGGTAGTACCAGCAGTAGTGCGATTAATAAAGTCGACATGGACACCGACTGCTTGGATTTTGAAATCTTGTGGGAGGACTTGACTATTGGAGAGCAAATTGGACAAGGCTCTTGTGGAACTGTATATCACGCCCTGTGGTATGGATCAGATGTTGCTGTCAAAGTGTTCTCTAGACAAGAATATTCAGAAGATGTGATACTTTCATTCAGACAGGAGGTATCTCTAATGAAAAAGCTTCGGCATCCCAATATTCTTCTCTTCATGGGCGTCGTGGCTTCAACGCAGCGGCTTTGCATTGTGACCGAGTTCCTTCCACGTGGAAGTTTATTTCGTCTACTTCAGAAAAGCATTGCCAAACTAGATTGGAGACGGCGGGTTCATATGGCATCCGATATAGCGCGGGGTATGAATTATCTTCATCATTGCAATCCACCCATCATTCACCGCGACTTGAAATCCTCCAATCTTCTAATCGATAAAAACTGGACCGTGAAGGTTGGTGACTTTGGTCTGTCGCGTCTCAAATATGACACTTATCTTTCAACTAAGACTGGAAAGGGAACGCCACAATGGATGGCTCCGGAAGTTCTACGCAACGAACCTTCAGATGAAAAGTCTGACATATACAGTTTCGGAGTTATATTGTGGGAGCTTGCCACTGAAAAGATCCCTTGGGATAATCTTAATTCAATGCAGGTGATTGGGGCAGTCGGGTTCATGAACCAGCGGCTTGAAATCCCGAAAGACGTGGATCCGCAGTGGGCTTCCATGATTGAGAGCTGCTGTCACAGTGATCCAGCGAGCAGGCCGACATTCCAGGAACTCCTAGAAAAGCTGAGAGAGCTTCAGAGAAAATACACACTTCAATTTCAGGCAGCTCGATCGGGATCAGGCGGCACCGGAGAAAACGCGCAGAAGGAGCTATAG 2361 45.74 MEVPPAEELLRKIHELEASHAQLKEEMTKLLLSGPTPDLRTDRKSHQHHRSHSISPQRSRLSGGRRKGGGGEGLDGPNAATAWKQGSASFKHSSPLQRESRSHDSLFVGEEDEGRNGGCGGPLPVNFTDSQYLNILQSMGQSVYIFDLNGRIIYWNRTAEKTFGYSAAEALGQDVIEILADAQDYPVANDIVRRVTLGESWTGQFPVKNRRGDRFLVVATNTPFYDDNNALIGIICVSSNSQSFEEVKVGLSPKHSELDSSYSRPRSIVNTKLGLDPQQPLQVAIASKISNLASKVSNKVKSKIRTGENISDREGGSGDSHHSDHGFADGVRPDHREDANSSGGSTPCGDLPPTPFGVFSSMEEKSVGKSSRESGDDGEEKPAIHKIITSKAEAWISKKGISWPWKGNEREGSEARNTRFGWPWLHNDQEAELQNYKDSSSGLKQENQTNEGNRVVNNEASGSWSSFNVNSTSSASSCGSTSSSAINKVDMDTDCLDFEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSRQEYSEDVILSFRQEVSLMKKLRHPNILLFMGVVASTQRLCIVTEFLPRGSLFRLLQKSIAKLDWRRRVHMASDIARGMNYLHHCNPPIIHRDLKSSNLLIDKNWTVKVGDFGLSRLKYDTYLSTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASMIESCCHSDPASRPTFQELLEKLRELQRKYTLQFQAARSGSGGTGENAQKEL 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3407379 3412932 - Bda024770.1 Bda08g00332 11188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00332 786 Pfam PAS fold 131 237 IPR013767 GO:0006355
Bda08g00332 786 MobiDBLite consensus disorder prediction 366 382 - -
Bda08g00332 786 MobiDBLite consensus disorder prediction 29 103 - -
Bda08g00332 786 SMART pas_2 130 196 IPR000014 -
Bda08g00332 786 MobiDBLite consensus disorder prediction 435 457 - -
Bda08g00332 786 MobiDBLite consensus disorder prediction 298 382 - -
Bda08g00332 786 SMART serkin_6 505 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00332 786 SUPERFAMILY PYP-like sensor domain (PAS domain) 134 237 IPR035965 -
Bda08g00332 786 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 34 777 - -
Bda08g00332 786 ProSiteProfiles Protein kinase domain profile. 505 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00332 786 Gene3D Phosphorylase Kinase; domain 1 498 582 - -
Bda08g00332 786 PRINTS Tyrosine kinase catalytic domain signature 728 750 IPR001245 GO:0004672|GO:0006468
Bda08g00332 786 PRINTS Tyrosine kinase catalytic domain signature 665 675 IPR001245 GO:0004672|GO:0006468
Bda08g00332 786 PRINTS Tyrosine kinase catalytic domain signature 579 592 IPR001245 GO:0004672|GO:0006468
Bda08g00332 786 PRINTS Tyrosine kinase catalytic domain signature 618 636 IPR001245 GO:0004672|GO:0006468
Bda08g00332 786 PRINTS Tyrosine kinase catalytic domain signature 684 706 IPR001245 GO:0004672|GO:0006468
Bda08g00332 786 CDD PAS 139 237 IPR000014 -
Bda08g00332 786 Pfam Protein tyrosine and serine/threonine kinase 505 757 IPR001245 GO:0004672|GO:0006468
Bda08g00332 786 Gene3D Transferase(Phosphotransferase) domain 1 584 770 - -
Bda08g00332 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Bda08g00332 786 MobiDBLite consensus disorder prediction 301 339 - -
Bda08g00332 786 Coils Coil 426 446 - -
Bda08g00332 786 SUPERFAMILY Protein kinase-like (PK-like) 492 756 IPR011009 -
Bda08g00332 786 CDD STKc_MAP3K-like 511 757 - -
Bda08g00332 786 ProSiteProfiles PAS repeat profile. 128 199 IPR000014 -
Bda08g00332 786 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 34 777 - -
Bda08g00332 786 Gene3D PAS domain 140 244 - -
Bda08g00332 786 Coils Coil 6 33 - -
Bda08g00332 786 TIGRFAM sensory_box: PAS domain S-box protein 131 236 IPR000014 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01183 Bda08g00332 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01183 Bda-Chr3:13994706 Bda08g00332 Bda-Chr8:3407379 0 dispersed
Bda08g00332 Bda-Chr8:3407379 Bda08g01026 Bda-Chr8:21310137 3.22E-107 dispersed
Bda13g00024 Bda-Chr13:450224 Bda08g00332 Bda-Chr8:3407379 4.20E-53 dispersed
Bda03g01169 Bda-Chr3:13341480 Bda08g00332 Bda-Chr8:3407379 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69758 PF07714 PK_Tyr_Ser-Thr 1.50E-66 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00332 - - qsu:111989009 1114.75