Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00341 ATGGTGAGCCAGGAGCAGCAGGAGGAGAAAAACCAGATTTCTAGTCGTCAATTGATTCGAAAATTGGGAAAATACGAGCTCGGGAGGACCCTGGGTGAAGGAAATTTCGGGAAGGTTAAGTTCGCCACGAATATTGAAACTGGCCGACCTTTCGCTATTAAGATTATCCAGAAGAAGAGAATCATCGATCTCAACATTACCAATCAGATTAAGAGGGAAATAGCCACTCTGAAGCTTCTCAAACATCCTAATGTAGTCAAGCTACACGAGGTGTTGGCCAGTAAAACCAAGATTTACATAGTCCTGGAGTATGTGACTGGAGGGGAATTATTTGACAGAATTGCATTTAACGGGAAGCTAAAGGAAGACGAAGGCAGGAAGCTCTTCCAGCAATTAATTGACGGTGTGAGCTACTGTCACACCAAAGGTGTTTTCCACAGGGATCTCAAGTTAGAGAACTTACTTGTTGACGCCAACGGAAACCTCAAGATATCTGATTTCGGCCTTAGTGCACTGCCTCAGCATTTTAAGGAGGATGGATTACTTCACACAACCTGTGGAAGTCCAAATTATGTTGCACCGGAGATACTAGCAAACAGAGGGTATGATGGTGCCATCTCAGACGTATGGTCATGTGGTGTAATTTTGTATGTTATTCTTACGGGGTCTCTCCCTTTTGACGACAGAAATCTTGTTGTACTTTATCATAAGATATTCAAGTGTGAAGTAAATTTACCCAAATGGCTGTCACCAGGAGCGCAAAACTTGATAAGAAGCATTCTTGACCCCAACCCCATTTCTCGGATTACAATTCCAGGTATTAAAACAGACAAATGGTTTAAGAAAGACTACAACCCTACGTATCCTGAAGAGGAAGAAGACGAGTACAATAACACTCACTCAAAAGCCACACCAATAAATGAAGGGGCATCTGAGGGTGAAAAGATTGAAAAATCTTCTACGCTCATAAATGCATTTCAGTTGATTGGAATGTCCTCGTGCCTTGATCTTTCAGGCTTCTTTGAGAAAGAGGATATTTGCGAGAGGAAGATCAGATTTACATCCAACCATTCCTTGACAGATCTACTTGAGAGGATTGAGGATATTGTAACCGAGATGGGATTCAGTGTTCAAAAGAAAAATGGAAAGTTGAGACTGGTGCAAGAGCACAAGGGTCTAACAAGTCCGGGCAGTCTCTCAGTCATAGCCGAGATATTAAAGATAAGTCACTCATTGCATGTTGTTGAACTACGAAAGACTTGTGGAGATTCATCAGACTATAGACAGCTGTGTAAAAAACTATCAAGTGATTTGGGTGTCACGTCTGACCAAGAGCTTTCACCCATGGAATAA 1353 41.98 MVSQEQQEEKNQISSRQLIRKLGKYELGRTLGEGNFGKVKFATNIETGRPFAIKIIQKKRIIDLNITNQIKREIATLKLLKHPNVVKLHEVLASKTKIYIVLEYVTGGELFDRIAFNGKLKEDEGRKLFQQLIDGVSYCHTKGVFHRDLKLENLLVDANGNLKISDFGLSALPQHFKEDGLLHTTCGSPNYVAPEILANRGYDGAISDVWSCGVILYVILTGSLPFDDRNLVVLYHKIFKCEVNLPKWLSPGAQNLIRSILDPNPISRITIPGIKTDKWFKKDYNPTYPEEEEDEYNNTHSKATPINEGASEGEKIEKSSTLINAFQLIGMSSCLDLSGFFEKEDICERKIRFTSNHSLTDLLERIEDIVTEMGFSVQKKNGKLRLVQEHKGLTSPGSLSVIAEILKISHSLHVVELRKTCGDSSDYRQLCKKLSSDLGVTSDQELSPME 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3480425 3484133 - Bda024779.1 Bda08g00341 11197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00341 450 PANTHER CBL-INTERACTING PROTEIN KINASE 21 15 444 - -
Bda08g00341 450 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00341 450 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00341 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Bda08g00341 450 SUPERFAMILY KA1-like 351 439 IPR028375 -
Bda08g00341 450 PANTHER - 15 444 - -
Bda08g00341 450 Gene3D Kinase associated domain 1, KA1 317 440 - -
Bda08g00341 450 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00341 450 MobiDBLite consensus disorder prediction 289 313 - -
Bda08g00341 450 CDD CIPK_C 324 438 - -
Bda08g00341 450 Gene3D Transferase(Phosphotransferase) domain 1 105 309 - -
Bda08g00341 450 Gene3D Phosphorylase Kinase; domain 1 14 104 - -
Bda08g00341 450 SUPERFAMILY Protein kinase-like (PK-like) 22 292 IPR011009 -
Bda08g00341 450 Pfam NAF domain 321 379 IPR004041 GO:0007165
Bda08g00341 450 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Bda08g00341 450 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00341 Bda-Chr8:3480425 Bda02g00137 Bda-Chr2:19715219 1.33E-160 dispersed
Bda08g00341 Bda-Chr8:3480425 Bda07g00803 Bda-Chr7:9522295 2.36E-164 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69759 PF00069 Pkinase 2.20E-70 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00341 K07198 - jre:108981583 658.292