Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00361 ATGATTTGGTTTGAACATTGCCAAATTGAGTACTCTCTCGCCAATTTCTTTTCTCAAATGGTTTACACTGGAAAATACCCACAACAGAACCAATTCAAGAAAAATGTATCAGACCCATCTGGGTTTAGCGAACGTTTGAATTATTTGATGAGTAATATTTCCCAGGAAGCTGCTAGTAATTCTTCGGAAAACATGTTTTCAACTGGGGAGATCCAGTTTTCGAGGAAGACGATGATTTATGGGCTTGTACAGTGTACGAGGGACATATTGCAGAGCTCATGCGAGAAGTGTTTGGGCTCTGCAATGGCGGAATTACTTGACTGCTGCTCTTACCGTGAAGGTGGGGCTGTTTTTAGCAGGACTTGTAACGTGAGGTTTGAGGTCTTCCAATTCTACAATACTTCCACCAATTTGATCATCTTCCCTTCATCCTCATATGATGGATGGAAGGTTCGGATTTCAGTTTCCGTGTTGTGCACATCGGCATTGATATTATTGGCAGTAGTGATCGGAGTTTTGATCGTCCGACACCGGCGAAAGATCAACACCAAGAAAGAAGAGGAAACTAACAGAAAGACTATGCTGCAAAATTTGGGGGCTCCGCAAGGAGTGACGATCACAGATAAGGGCGAGTTCGTGAATTCCGAAGAATTGATCTTCATGGATCTAAACGTCGTAAAGGCTGCTACCGACAACTTTTCCGAACAGAACAAGCTTGGACAAGGCGGGTTTGGGTCGGTTTACAAGGGTATACTAGCAGATGGGAAGGAGATAGCAGTGAAGAGGCTGTCAAGGAAGTCATGGCAAGGGATGGTGGAATTCAAGAATGAGATTATACTCATCGCTCGACTTCAACACAAAAACCTCGTCAAACTCATCGGTTGCGCGATGTCCGGGGACGAGAAGCTGCTTATCTTTGAATTCATGCCTAACAACAGCTTGGATACCTACATTTTTGATTCAAAAAGGCGATCGAAGCTAGGCTGGAGGAAGTGCTTTGAAATAATTATCGGGATAGCACGGGGGCTTCTCTATCTTCACCAAGACTCGAGGCTGATGATCATTCACCGGGATTTGAAGCCGAGCAATGTGTTGTTGGACAGCGAAATGGCGGCTAAAATCTCCGATTTCGGAATGGCGAGGATCTTTTGCGAAAATGAGAACACGGCTAATACCAAACGAGTCGTGGGATCGTTCGGATACATGGCCCCGGAATATGCGATGGAGGGAGTGTTCTCCGTGAAGTCTGATGTGTACAGCTTCGGGGTAGTTCTGCTTGAAATCGTTAGTGGAAGAAGAAACAATGGCTTCCATCAAAATGAGCAGGCCAATCACTTGCAGCTCATGCATGGTGGCTGTGGAGCAACGGGAAAGAAGCAGAGCTGGTGGAGCCTCAGCCATGGCTGCTGGAAACAAACTCAGCACAGCAGGCTGTGA 1437 45.93 MIWFEHCQIEYSLANFFSQMVYTGKYPQQNQFKKNVSDPSGFSERLNYLMSNISQEAASNSSENMFSTGEIQFSRKTMIYGLVQCTRDILQSSCEKCLGSAMAELLDCCSYREGGAVFSRTCNVRFEVFQFYNTSTNLIIFPSSSYDGWKVRISVSVLCTSALILLAVVIGVLIVRHRRKINTKKEEETNRKTMLQNLGAPQGVTITDKGEFVNSEELIFMDLNVVKAATDNFSEQNKLGQGGFGSVYKGILADGKEIAVKRLSRKSWQGMVEFKNEIILIARLQHKNLVKLIGCAMSGDEKLLIFEFMPNNSLDTYIFDSKRRSKLGWRKCFEIIIGIARGLLYLHQDSRLMIIHRDLKPSNVLLDSEMAAKISDFGMARIFCENENTANTKRVVGSFGYMAPEYAMEGVFSVKSDVYSFGVVLLEIVSGRRNNGFHQNEQANHLQLMHGGCGATGKKQSWWSLSHGCWKQTQHSRL 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3709811 3712229 - Bda024802.1 Bda08g00361 11217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00361 478 ProSitePatterns Protein kinases ATP-binding region signature. 239 261 IPR017441 GO:0005524
Bda08g00361 478 ProSiteProfiles Protein kinase domain profile. 233 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00361 478 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Bda08g00361 478 Gene3D - 24 131 IPR038408 -
Bda08g00361 478 Gene3D Transferase(Phosphotransferase) domain 1 309 478 - -
Bda08g00361 478 SUPERFAMILY Protein kinase-like (PK-like) 218 447 IPR011009 -
Bda08g00361 478 Gene3D Phosphorylase Kinase; domain 1 208 308 - -
Bda08g00361 478 Pfam Protein tyrosine and serine/threonine kinase 236 477 IPR001245 GO:0004672|GO:0006468
Bda08g00361 478 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 446 - -
Bda08g00361 478 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 446 - -
Bda08g00361 478 SMART serkin_6 233 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00361 478 ProSiteProfiles Gnk2-homologous domain profile. 24 131 IPR002902 -
Bda08g00361 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00361 Bda-Chr8:3709811 Bda10g00812 Bda-Chr10:42479353 2.29E-88 dispersed
Bda09g01293 Bda-Chr9:44693880 Bda08g00361 Bda-Chr8:3709811 1.15E-46 dispersed
Bda08g00361 Bda-Chr8:3709811 Bda02g00574 Bda-Chr2:46575132 1.13E-119 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69761 PF07714 PK_Tyr_Ser-Thr 1.00E-48 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00361 - - jre:109013025 573.933