Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00363 ATGAGTAACCTGAAGCTTGGAGTCGAGGTTGTTAGTGCCCATGATCTTGTGCCCAAAGACGGGCATGGATCATCCAGCGCTTACGTTGAGCTCCATTTTGACCATCTGAAATTTCGTACGACAATCAAGGAAAGAGATCTCAATCCGGTTTGGAACGAGAGTTTCTTCTTCAACATATCCGATCCAAACAATCTTCATAATCTCACTCTTGAGGCCTATGTTTATAACCACAACAAAGCCAACTCTAAATCATTTCTTGGATATGTACGAATAGCCGGTACCTCATTCGTTCCCTACTCTGAAGCTGTTGTTTTCAACTACCCTTTGGAGAAGAAAGGTGTTTTCTCTCGAGTAAGTGGAGAGCTTGGACTGAGGGTCTTTGTTACTGATGACCCTTCTATAAGATCTTCAAACGCTTTTCCTGCAATGGAGCCGACTATGACTATTGCAGAGAAGAATGAAAATGACACCCCTGCCCGACAATTGGGAAGTTTAGTTTCGAAGCTTTTCTCAGGCAATAAATCGGTGGAAGAGCAGCAACAACAGCATGTTCCAGTGGGCCAGCCAATCATAAACTATGGAGCGCAAGCGATGAACTTTGTACCTCAGGCAGCCAGAGTTGCCAACACTTTCTCGGCTTTATCGCCACAACTTGTCGATTATGGTGTGAAAGAGACAAGTCCTCATCTTGGAGGTGGGAAAGTCATCGGAGGGCGAGTCATACCTAATAATCGACCTTCAAGCACATTCGATCTTGTTGAAAAGATGAATTATGTTTTTGTGAGAGTTGTGAAAGCTCGTGATCTTCCTGCCAAGGATGTAACAGGAAGTCTTGATCCGTATGTCGAAGTGAGACTTGGTAACTACAAAGGAATTACAAAGCATTTTGAGAGAAAGAATAATCCGGAATGGAACGAGGTTTTCGCATTTTCAAAGGAAAATGTGCAGTCAACTCTACTTGAAGTTGTGGTGAAGGACAAGGATATGATTAAGGACGACTTTGTCGGGGTTGTGCAGTTTGATCTTAACGAAGTTCCTACGCGGGTTCCACCCGATAGTCCATTGGCTCCGGAATGGTATCGTCTTCAGGACCAAAATAGGGAAAATAGGGAGAAGTCAAAGGGGGAATTGATGCTTGCAGTCTGGTTTGGAACGCAGGCCGACGAGGCTTTTCCCTACGCTTGGCATTCGGATGCTGTCTTTTCTACCGATGACTCATCAGGTACCTCTACAAACATCCGATCAAAAGTTTACCATTCACCAAGATTGTGGTATGTTCGAGTCAATATAATCGAGGCCCAAGATGTTGTTGGGACCGATAAATCTAGATTTCCCGATGTGTATGTTAAGATGCAGATTGGCAACCAAATCCTTAAGACAAAGTCAGTTCAAACTCAGACTACTCGCCCATTATGGAATGAGGAATTTATGTTTGTAGCTGCTGAACCTTTTGACGATCATTTGATCCTTTCACTTGAAGATCGGGTGGGTCCCAGCAAAGACGAAACCATTGGAATAGTTGTTATACCGTTGACCACCGTTGATAGGCGTGCTGATGATCGACTTATTCATAACCGGTGGTACAATTTTGAGAGGTCTGTGTCTGATGCAATGGAAGGCGATAATGCGAAGAAAGACAGGGACAAATTTTTTAGCAAAGTCAATGTCAGAATTTGTCTCGACGGTGGTTACCATGTGCTTGACGAGTCAACTCACTATAGCAGCGACCTTCGCCCGAGTGCGAGGCAAATATGGAAATCTTCAATTGGTGTTTTGGAGCTTGGTATTCTAAGTGTCGAAGGTCTTCACCCCGTGAAAACGAGAGATGGTAAAGGCACATCAGACACGTTTTGTGTCGCAAAGTACGGTCACAAGTGGGTCCGAACTCGGACAGTAATGAACAGTCTGAGCCCAAAATACAACGAGCAATACACTTGGGAGGTTTACGATCCGGCGACGGTGCTCACAGTGGGAGTTTTCGATAACGGTAACACGGGTGGCTCTAGTGCCAATAGAGACTCGAAAATCGGAAAAGTTCGGATTCGTATCTCGACTCTTGAAATTGGCCGGGTCTATACCCACAAGTATCCGTTGCTTATGCTTCAGCCTTCGGGTTTAAAAAAGATGGGAGAATTACATTTGGCGATAAGATTCTCATGCACATCGATGGTGAATTTAATGTATCTCTACTCCCGACCTCTGTTGCCGAAAATGCACTATGCTAGGCCGTTGAATGTAGTGCAACAAGACAAGCTCCGCCACCAGGCCCTCAACATAGTTGCATCAAGGCTTAGTCGGGCTGAGCCTCCTCTTCGGAAGGAGGTGATTGAGTATATGTCTGACGTGGACGCCCATCTTTGGAGCATGAGGAAGAGCAAAGCAAACTTTTTTCGGATTATGTCACTTTTCTCAGGATTAATTGCGGTCAATTTTGGCTCAAAAGAAGACGCAATTTTTTGTGGTGTCTTTGATGGCCATGGGCCTTATGGTCATTTGGTTGCGAAGAAAGTGAGAGATTCTCTTCCTTCAAAGCTAAGTGCCCAGTGGGAATTAGATGCTACGTATAAGGTTGGTCCTAATACTTCATTTGAATTGATTAATGTGGACTCTAAAACTTTTCATAATGATTATCAGAGCAATGGACAAGACCTTATAATAGGAAATGTAGGGGACTCGAGAGCTATACTAGGCACAAGAGATGAAAATGACTCTCTAATTGCTATGCAGTTGACCGTAGATCTCAAGCCAAATCTTTCAAGAGAAGCTGAAAGAATAAAGAACTGTCATGGACGAGTGTTTGCTCTACCAATGGAACCTGATGTTGCTCGAGTTTGGATGCCCAACTGTGACTCCCCTGGTCTTGCCATGGCTCGGGCATTTGGAGACTTCTGCTTAAAAGACTTTGGCTTGATCTCTGTCCCGGACATTTTTCATCATCGAATCACAGAGAGGGATGAGTTTGTTGTACTGGCTACAGATGGGGTATGGGATGTTCTTTCGAATGAAGAAGTGGTGTACATAGTTGGAACTGCCTCAAAATCTTCTGCGGCTCGAGCTATTGTGGAGTCGGCAACTCGAGCTTGGAGATACAAGCACCCTTATTCTAAAATTGATGATTGTGCTGTGGTTTGCCTCTTCCTCCACTCAACAAATACAAGCAGCAGCAGTTAG 3171 44.4 MSNLKLGVEVVSAHDLVPKDGHGSSSAYVELHFDHLKFRTTIKERDLNPVWNESFFFNISDPNNLHNLTLEAYVYNHNKANSKSFLGYVRIAGTSFVPYSEAVVFNYPLEKKGVFSRVSGELGLRVFVTDDPSIRSSNAFPAMEPTMTIAEKNENDTPARQLGSLVSKLFSGNKSVEEQQQQHVPVGQPIINYGAQAMNFVPQAARVANTFSALSPQLVDYGVKETSPHLGGGKVIGGRVIPNNRPSSTFDLVEKMNYVFVRVVKARDLPAKDVTGSLDPYVEVRLGNYKGITKHFERKNNPEWNEVFAFSKENVQSTLLEVVVKDKDMIKDDFVGVVQFDLNEVPTRVPPDSPLAPEWYRLQDQNRENREKSKGELMLAVWFGTQADEAFPYAWHSDAVFSTDDSSGTSTNIRSKVYHSPRLWYVRVNIIEAQDVVGTDKSRFPDVYVKMQIGNQILKTKSVQTQTTRPLWNEEFMFVAAEPFDDHLILSLEDRVGPSKDETIGIVVIPLTTVDRRADDRLIHNRWYNFERSVSDAMEGDNAKKDRDKFFSKVNVRICLDGGYHVLDESTHYSSDLRPSARQIWKSSIGVLELGILSVEGLHPVKTRDGKGTSDTFCVAKYGHKWVRTRTVMNSLSPKYNEQYTWEVYDPATVLTVGVFDNGNTGGSSANRDSKIGKVRIRISTLEIGRVYTHKYPLLMLQPSGLKKMGELHLAIRFSCTSMVNLMYLYSRPLLPKMHYARPLNVVQQDKLRHQALNIVASRLSRAEPPLRKEVIEYMSDVDAHLWSMRKSKANFFRIMSLFSGLIAVNFGSKEDAIFCGVFDGHGPYGHLVAKKVRDSLPSKLSAQWELDATYKVGPNTSFELINVDSKTFHNDYQSNGQDLIIGNVGDSRAILGTRDENDSLIAMQLTVDLKPNLSREAERIKNCHGRVFALPMEPDVARVWMPNCDSPGLAMARAFGDFCLKDFGLISVPDIFHHRITERDEFVVLATDGVWDVLSNEEVVYIVGTASKSSAARAIVESATRAWRYKHPYSKIDDCAVVCLFLHSTNTSSSS 1056
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3718709 3731298 - Bda024804.2 Bda08g00363 11219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00363 1056 CDD C2C_MCTP_PRT_plant 425 579 - -
Bda08g00363 1056 Gene3D C2 domain 409 544 IPR035892 -
Bda08g00363 1056 Gene3D C2 domain 243 384 IPR035892 -
Bda08g00363 1056 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 810 - -
Bda08g00363 1056 CDD C2D_MCTP_PRT_plant 591 715 - -
Bda08g00363 1056 CDD C2B_MCTP_PRT_plant 258 385 - -
Bda08g00363 1056 SUPERFAMILY PP2C-like 808 1048 IPR036457 -
Bda08g00363 1056 SMART C2_3c 591 695 IPR000008 -
Bda08g00363 1056 SMART C2_3c 5 105 IPR000008 -
Bda08g00363 1056 SMART C2_3c 425 523 IPR000008 -
Bda08g00363 1056 SMART C2_3c 258 354 IPR000008 -
Bda08g00363 1056 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Bda08g00363 1056 Pfam Protein phosphatase 2C 880 1023 IPR001932 -
Bda08g00363 1056 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 424 581 IPR035892 -
Bda08g00363 1056 SMART PP2C_4 789 1045 IPR001932 -
Bda08g00363 1056 ProSiteProfiles PPM-type phosphatase domain profile. 783 1047 IPR001932 -
Bda08g00363 1056 ProSiteProfiles C2 domain profile. 573 696 IPR000008 -
Bda08g00363 1056 Gene3D - 801 1050 IPR036457 -
Bda08g00363 1056 ProSiteProfiles C2 domain profile. 240 360 IPR000008 -
Bda08g00363 1056 ProSiteProfiles C2 domain profile. 405 528 IPR000008 -
Bda08g00363 1056 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 134 IPR035892 -
Bda08g00363 1056 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 590 725 IPR035892 -
Bda08g00363 1056 Gene3D C2 domain 3 157 IPR035892 -
Bda08g00363 1056 CDD PP2Cc 807 1047 IPR001932 -
Bda08g00363 1056 Gene3D C2 domain 567 719 IPR035892 -
Bda08g00363 1056 CDD C2A_MCTP_PRT_plant 5 130 - -
Bda08g00363 1056 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 258 399 IPR035892 -
Bda08g00363 1056 Pfam C2 domain 591 698 IPR000008 -
Bda08g00363 1056 Pfam C2 domain 424 528 IPR000008 -
Bda08g00363 1056 Pfam C2 domain 5 92 IPR000008 -
Bda08g00363 1056 Pfam C2 domain 259 350 IPR000008 -
Bda08g00363 1056 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 810 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00363 Bda-Chr8:3718709 Bda08g00521 Bda-Chr8:5240978 0 dispersed
Bda15g00908 Bda-Chr15:15019722 Bda08g00363 Bda-Chr8:3718709 3.62E-73 dispersed
Bda03g01234 Bda-Chr3:16989273 Bda08g00363 Bda-Chr8:3718709 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00363 - - rcu:8261857 1207.2