Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00378 TTGACCATGGATAGTAGGGTTCAAGGAATGCTTGTTGGTTCGGAGATTCATGGATTTCATACATTGAAAGATTTGGATATGAGAAACATTATGGATGAAGCACAAATGAGATGGCTCCGGCCCAATGAAATTCATGCCATACTTTGTAATCACAGATACTTCAACATCAATGTCAAACCATTGAACTTGCCCCCGGTTTCCTTTCCGATCAAACTTTTTGTGTTATCTGCCTTTTTTTACAGATTACTTTCACTAACTGAAACAGGTGGTACTATAAAGTTATTTGATCGTAAGATGCTTAGGAACTTTAGGAAGGATGGTCATAACTGGAAAAAGAAAAAGGATGGGAAGACAGTCAAAGAAGCACATGAGCACCTAAAAGTTGGTAATGAAGAAAGGATTCATGTATATTATGCACATGGACAGGATGCTCCAACCTTTGTCCGTCGGTGCTATTGGCTTCTTGATAAGAGTCTAGAACACATAGTTCTTGTTCATTACCGTGAAACACAAGAGGTACATTTGCAGGGTTCTCCAGCCACCCCTGTGAATTCTAATTCTAGTTCTGTCTCCGACCATTCTGCCCCCTCGCGTTTATCAGAAGAACTTGATTCTGGGACTGACCAAACTCCTCAAGTTGGTGAAAGTGAATTTCTAGCAGAGCCTCAAAATAATTTAACTGTGAAGAATTATGAGCAAAGACTTCATGAGATTAACACGCTTGAATGGGATGAGCTTCTTGTAACAGATGATATTTCCAATACACCTAAAGGAGATGGCAAAGTCTGTTTTGACCAACAGAATCGAGTTGCAGTGAATGATTCCACAATTGGAGGAGGCAAGAATTTATTAGTGGAACGTTCTACATTTGACGATATAAGTGGTTCAACTGGGAGATATAACACAAGTTATTTGGGTTCACCAAACAGCAGCTACATATCTACAGCGGTTAGTCAATTGAATTCAAATGCACAGAAAGGGAATTTCATTGCAATGGCCTCCAATGATTCTTCGGGTATTGGGGTCCACGAGGGTTTGCAAAGTCAGGATAGTTTTGGGCGGTGGATAAATGAGATTATCTCTGACTCTCCTGGTTCAGTAGATGATTCAGCTTTTGAGTCCTCCATTTTACCTCATGAGGAATTTACCTCTGATATAGATCATCAACAATCTTCTATTCCAGAACAAATTTTTGACATAACTGATATCTCTCCTGGATGGGCATTTACGACAGAAAGAACCAAGATTTTGATAACTGGATTCTTTCATGACGAGTTTGCTCATCTGGCTAAATCCAGTTTGTTTTGTGTCTGCGGCGATGTTTGTATTCCTACAGAAGTTGTTCAACTTGGAGTATATCGGTGCCTGGTACCACCACATCCACCTGGCTTTGTAAATCTCTATCTCAGTTTAGATGGTCAAAAACCAATCAGCCAAGTTCTGAATTTTGAGTATCACAGCAAATTACTGGATGGTTCAGGAGTTTCTTTAGAAGAAAAAGACAGATGGAAGGAGTTCCAAGTACAGATGAGGCTTCTTGGCTTGCTTTTTTCTGCATCTAAGAGCCTGAGCATTCTATCTAGTAAAGCATCACCAACCGCGCTGAAGGTAGCGAAGAACTTTGCTCAAAAAACCTCTAACATTGCCAATAGTTGGGCTTACTTGCACAAGTCAATTCAAGATAATAAAATTTCATTTCCATCTGCGAAAGATGGATTGTTGGAAGTAATTTTAAAGAATAGAGTAAGGGAATGGCTATTAGAAAGAATTGTTGAAGGGTCCAAGAAGAGCACGGACTTTGATGCCCAAGGTCAAGGAGTAATTCACTTATGTGCCATTCTGGGATATTCATGGGCTATACAGTTATTTGCTTGGTCAGGTTTAACATTGGATTTTCGGGACAAATTTGGATGGACTGCTCTTCACTGGGCAGCATATTGCGGCAGGGAGAAAATGGTTGCAGTTCTTCTATATGCTGGAGCAAAGCCGAACTTGGTCACAGACCCAACCCCAGAAAATCCTGGGGGATGCACAGCTGCTGATCTTGCATCTTTCAAGGGTCATGACGGCTTGGCTGCCTATCTTTCAGAAAAGGCTTTAGTATCACATTTTCAGGAAATGAGTATAGCTGGGAATATCAGTGGTACACTGCGAACCAGCACAACTGAGAAGGAGAGTGCAAACTCTCAGAACCTCGGAGAGGAGCAACTATATGTGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGTGCGACCCCATTTTAAGGTTTTCTCCCAAGAGTTTCTTCTCTTCTTAA 2772 33.55 LTMDSRVQGMLVGSEIHGFHTLKDLDMRNIMDEAQMRWLRPNEIHAILCNHRYFNINVKPLNLPPVSFPIKLFVLSAFFYRLLSLTETGGTIKLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDAPTFVRRCYWLLDKSLEHIVLVHYRETQEVHLQGSPATPVNSNSSSVSDHSAPSRLSEELDSGTDQTPQVGESEFLAEPQNNLTVKNYEQRLHEINTLEWDELLVTDDISNTPKGDGKVCFDQQNRVAVNDSTIGGGKNLLVERSTFDDISGSTGRYNTSYLGSPNSSYISTAVSQLNSNAQKGNFIAMASNDSSGIGVHEGLQSQDSFGRWINEIISDSPGSVDDSAFESSILPHEEFTSDIDHQQSSIPEQIFDITDISPGWAFTTERTKILITGFFHDEFAHLAKSSLFCVCGDVCIPTEVVQLGVYRCLVPPHPPGFVNLYLSLDGQKPISQVLNFEYHSKLLDGSGVSLEEKDRWKEFQVQMRLLGLLFSASKSLSILSSKASPTALKVAKNFAQKTSNIANSWAYLHKSIQDNKISFPSAKDGLLEVILKNRVREWLLERIVEGSKKSTDFDAQGQGVIHLCAILGYSWAIQLFAWSGLTLDFRDKFGWTALHWAAYCGREKMVAVLLYAGAKPNLVTDPTPENPGGCTAADLASFKGHDGLAAYLSEKALVSHFQEMSIAGNISGTLRTSTTEKESANSQNLGEEQLYVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCDPILRFSPKSFFSS 923
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3870823 3878267 + Bda024820.1 Bda08g00378 11234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00378 923 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 16 741 - -
Bda08g00378 923 Gene3D Immunoglobulins 393 489 IPR013783 -
Bda08g00378 923 Pfam IPT/TIG domain 400 485 IPR002909 -
Bda08g00378 923 SUPERFAMILY Ankyrin repeat 600 698 IPR036770 -
Bda08g00378 923 Pfam CG-1 domain 89 169 IPR005559 GO:0003677
Bda08g00378 923 Gene3D - 567 705 IPR036770 -
Bda08g00378 923 ProSiteProfiles Ankyrin repeat region circular profile. 636 664 - -
Bda08g00378 923 SMART CG_1_2 30 171 IPR005559 GO:0003677
Bda08g00378 923 ProSiteProfiles Ankyrin repeat profile. 636 668 IPR002110 GO:0005515
Bda08g00378 923 SMART ANK_2a 675 704 IPR002110 GO:0005515
Bda08g00378 923 SMART ANK_2a 636 665 IPR002110 GO:0005515
Bda08g00378 923 ProSiteProfiles CG-1 DNA-binding domain profile. 27 176 IPR005559 GO:0003677
Bda08g00378 923 SUPERFAMILY E set domains 400 485 IPR014756 -
Bda08g00378 923 MobiDBLite consensus disorder prediction 176 218 - -
Bda08g00378 923 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 16 741 - -
Bda08g00378 923 Pfam Ankyrin repeats (3 copies) 584 665 IPR002110 GO:0005515
Bda08g00378 923 Coils Coil 739 740 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01166 Bda08g00378 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01166 Bda-Chr3:13068235 Bda08g00378 Bda-Chr8:3870823 0 dispersed
Bda08g00378 Bda-Chr8:3870823 Bda15g00806 Bda-Chr15:12049284 2.17E-35 dispersed
Bda08g00378 Bda-Chr8:3870823 Bda03g01181 Bda-Chr3:13857554 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00378 K21596 - jre:108994781 920.613