Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00418 ATGGCCCTAGTCTTGCATGCAGGAAAGACAAATAAAAATAGTTTTAAGACACTCATTGCTGCAGAGTATGTTGGTGTTCAAGTCGAACTCGCCTCAAATTTTGAGATGGGTGTTTCAAATAAAACTCCAGAATTTATGAAGATGAACCCTATTGGGAAGGTCCCTGTGCTGGAGACGCCTGATGGTTCCATATTTGAGAGCAATGCCATTGCACGATATGTTTCTCACTTGAAGACTGAATGCAACCTATTTGGCTCTTCTCTTATTGATTATGGCCATGTTGAACAGTGGATTGATTTTGCATCATTAGAGATTGATGTGCACATTCTGACTTGGTTTAGACCAAGAAGGGGTTTCGCACCATACCTTCCTCCTGTCGAGGAAGCTGCTATTACTGCTTTGAAGAGAGCGTTGGGTGCTTTGAACGTTCACCTTGCTTCAAACACTTATCTTGTGGGGAACTCTGTGACGCTGGCTGACATCATAATGACATGTAACTTGTATCTGGGTTTCACTCAGTTAATGACCAAGATCTTTACCTCTGAGTTCCCTCACGTTGAGAGATACTTCTGGACCTTGGTCAATCAACCAAACTTCAAAAAGATACTTGGTGAAGTTAAGCAAACTGAGTCTGTTCCACCAATTCAATCTGTGAAAAAGCCTTCCCAGCCTAAAGAACCTGTTAAGCCAAAGCCTAAGGATGAGCCGAAGAAAGAAGTTAAGAAAGAAGAGGCAAAGGAAAAGCCCAAGGTGGAAGCTGGTGAAGAAGAAGAAGAGGCGCCAAAACCAAAGCCCAAAAATCCCCTTGATCTATTGCCTCCCAGTCCAATGATTCTGGATGAATGGAAACGGCTTTACTCTAACACAAAGACCAACTTTCGCGAGGTTGCAATTAAAGGATTCTGGGACATGTATGATCCTGAGGGTTATTCTCTTTGGTTCTGTGATTACAAGTACAACGAGGAGAATACTGTATCATTCGTAACACTTAACAAAGTTGGTGGATTTCTGCAACGCATGGATCTAGCCCGAAAGTACGCATTTGGGAAGATGCTTGTGATTGGGTCAGAAGCACCATTTAAAGTGAAAGGGCTATGGATTTTCCGCGGCAAAGAGATACCACAATTTGTGATCGATGAGTGCTACGATATGGAACTTTACAAATGGACAAAGGTGGATATCTCTGACGAAGCCCAGAAGGAGCGCGCGAGCCAGATGATCGAAGATCACGAGCCATTTGAGGGAGAGGCTCTTTTGGATGCAAAATGTTTCAAGTGA 1278 43.19 MALVLHAGKTNKNSFKTLIAAEYVGVQVELASNFEMGVSNKTPEFMKMNPIGKVPVLETPDGSIFESNAIARYVSHLKTECNLFGSSLIDYGHVEQWIDFASLEIDVHILTWFRPRRGFAPYLPPVEEAAITALKRALGALNVHLASNTYLVGNSVTLADIIMTCNLYLGFTQLMTKIFTSEFPHVERYFWTLVNQPNFKKILGEVKQTESVPPIQSVKKPSQPKEPVKPKPKDEPKKEVKKEEAKEKPKVEAGEEEEEAPKPKPKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNEENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWIFRGKEIPQFVIDECYDMELYKWTKVDISDEAQKERASQMIEDHEPFEGEALLDAKCFK 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4252353 4254990 - Bda024866.1 Bda08g00418 11274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00418 425 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 265 425 IPR036433 GO:0003746|GO:0006414
Bda08g00418 425 Pfam Glutathione S-transferase, N-terminal domain 10 75 IPR004045 -
Bda08g00418 425 Pfam Glutathione S-transferase, C-terminal domain 126 197 IPR004046 -
Bda08g00418 425 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 265 425 IPR001662 GO:0003746|GO:0006414
Bda08g00418 425 MobiDBLite consensus disorder prediction 213 273 - -
Bda08g00418 425 CDD GST_C_EF1Bgamma_like 90 210 - -
Bda08g00418 425 PANTHER - 1 425 - -
Bda08g00418 425 SFLD Main (cytGST) 4 190 - -
Bda08g00418 425 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Bda08g00418 425 SMART EF1G_2 264 372 IPR001662 GO:0003746|GO:0006414
Bda08g00418 425 Gene3D Glutaredoxin 1 74 - -
Bda08g00418 425 Pfam Elongation factor 1 gamma, conserved domain 264 372 IPR001662 GO:0003746|GO:0006414
Bda08g00418 425 MobiDBLite consensus disorder prediction 224 265 - -
Bda08g00418 425 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 425 IPR044628 GO:0004364
Bda08g00418 425 CDD GST_N_EF1Bgamma 3 77 - -
Bda08g00418 425 Gene3D - 81 217 - -
Bda08g00418 425 SUPERFAMILY GST C-terminal domain-like 82 214 IPR036282 -
Bda08g00418 425 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Bda08g00418 425 SFLD Glutathione Transferase (cytosolic) 4 190 IPR040079 -
Bda08g00418 425 SUPERFAMILY eEF1-gamma domain 265 425 IPR036433 GO:0003746|GO:0006414
Bda08g00418 425 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00192 Bda08g00418 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00418 Bda-Chr8:4252353 Bda08g01187 Bda-Chr8:47879835 2.04E-09 dispersed
Bda06g00192 Bda-Chr6:2589249 Bda08g00418 Bda-Chr8:4252353 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00418 K03233 - zju:107412556 673.7