Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00443 ATGCTGAGTGCAAGGTACTGCAGATGGCTATATCTTTTATGGTCTATGCTAATTTTGCTAAAGGGTGAAGGGTTCAATGTGGATATAACTTACGTTGAGAGTGCACTTGCCAAAGGAGCTGTTTGTTTGGATGGAAGTGCCCCGGCTTACCATTTCAGTCCCGGATTCGGATCCGGAGTCGACAATTGGTTGGTCCAAATCGAGGGTGGAGGATGGTGTAATAATGTGACTACTTGCCTTGCTCGTAAGACCACTCGACTAGGTTCATCGAAGGCAATGGTCACACAACTCGCCTTCTCCGGAATTCTCAGTAACAATCAAAAATCCAATCCGGACTTTTACAACTGGAACAAAATCAAGGTTAGATACTGTGATGGATCTTCTTTTACCGGTGATGTTGAAGCTGTCGATCCAGCTACCAATCTTCATTTCAGAGGAGCAAGGGTGTGGCTTGCTGTTGTTGAGGACCTATTCGCTAAAGGGATGAAAAATGCTAAAAATGCTATTCTCTCTGGTTGTTCTGCTGGTGGTTTGACTTCTATTTTGCACTGTGATAACTTCAGATCTCTACTCCCATCTGCCACGGTTAAATGCGTAGCAGACGCGGGATATTTCATCAATGCGAAGGATGTTTCCGGAGCTTCACATATCGAATCTTTCTACAATGATGTGGTGGAAACTCATAATTCGGCAAAGACTTTGCCTGCAGCCTGCACTTCAAAACTAAGACCGGGGTTGTGCTTCTTTCCGCAAAATGTCGCCCCGCATATCCAAACCCCGCTCTTTCTCGTAAATGCAGCATACGATTCATGGCAGATTAAGAACATTTTAGCACCCGGTGTGGCCGATCCGCACGGCGTGTGGCACAACTGCAAGCTCGATATAAAAAGCTGCTCCTCCAGTCAGCTTGCAACCATGCAAGCTTACCGATTGGAGTTCTTAGACGCATTAAATGGGGTGAGAACCTCCCCATCGAACGGAATGTTTGTAGACGCTTGCTACGCCCACTGCCAGACCGAAATGCAAGAAACATGGTTGAGGGACGATTCCCCTGCACTTAAAAACACGAAGATTGCAGAGGCAGTTGGAGACTGGTTTTTTGACAGAATGTCTTTCCAAACGATAGATTGCGCTTACCCTTGCAACCCGACTTGCCATAACCGGATATTTGAATCTCAAATGGAACTCTGA 1191 46.1 MLSARYCRWLYLLWSMLILLKGEGFNVDITYVESALAKGAVCLDGSAPAYHFSPGFGSGVDNWLVQIEGGGWCNNVTTCLARKTTRLGSSKAMVTQLAFSGILSNNQKSNPDFYNWNKIKVRYCDGSSFTGDVEAVDPATNLHFRGARVWLAVVEDLFAKGMKNAKNAILSGCSAGGLTSILHCDNFRSLLPSATVKCVADAGYFINAKDVSGASHIESFYNDVVETHNSAKTLPAACTSKLRPGLCFFPQNVAPHIQTPLFLVNAAYDSWQIKNILAPGVADPHGVWHNCKLDIKSCSSSQLATMQAYRLEFLDALNGVRTSPSNGMFVDACYAHCQTEMQETWLRDDSPALKNTKIAEAVGDWFFDRMSFQTIDCAYPCNPTCHNRIFESQMEL 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4535050 4537596 - Bda024893.1 Bda08g00443 11299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00443 396 PANTHER PECTIN ACETYLESTERASE 6 390 - -
Bda08g00443 396 Pfam Pectinacetylesterase 23 370 IPR004963 GO:0016787
Bda08g00443 396 PANTHER NOTUM-RELATED 6 390 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00220 Bda-Chr1:25784663 Bda08g00443 Bda-Chr8:4535050 9.35E-120 dispersed
Bda08g00443 Bda-Chr8:4535050 Bda10g00922 Bda-Chr10:43630166 3.65E-155 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00443 K19882 - zju:107430580 642.114